EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMICG00000012867 (Gene tree)
Gene ID
105857972
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Plus strand
Length
71825 bases
Position
chr16:47570448-47642272
Accession
105857972
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000032654tRNA_anti-codonPF01336.258.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000035279RPA1-2012861XM_012740774ENSMICP00000032654616 (aa)XP_012596228UPI000989BA4C
Gene Model
Click here to download ENSMICG00000012867's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012867's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000012867RPA19962.726ENSAPOG00000011658rpa19963.432Acanthochromis_polyacanthus
ENSMICG00000012867RPA18963.594ENSAPOG00000019409RPA18464.037Acanthochromis_polyacanthus
ENSMICG00000012867RPA19990.805ENSAMEG00000007706RPA19890.805Ailuropoda_melanoleuca
ENSMICG00000012867RPA19558.404ENSACIG00000012881RPA19958.404Amphilophus_citrinellus
ENSMICG00000012867RPA19558.262ENSACIG00000007277rpa19958.262Amphilophus_citrinellus
ENSMICG00000012867RPA19963.072ENSAOCG00000023376rpa19963.621Amphiprion_ocellaris
ENSMICG00000012867RPA19954.338ENSAOCG00000009003RPA19955.624Amphiprion_ocellaris
ENSMICG00000012867RPA19954.217ENSAPEG00000019132RPA19954.669Amphiprion_percula
ENSMICG00000012867RPA19963.235ENSAPEG00000008634rpa19963.793Amphiprion_percula
ENSMICG00000012867RPA19955.352ENSATEG00000006443RPA19954.839Anabas_testudineus
ENSMICG00000012867RPA19463.966ENSATEG00000022024rpa19963.966Anabas_testudineus
ENSMICG00000012867RPA19865.140ENSAPLG00000012442RPA110065.140Anas_platyrhynchos
ENSMICG00000012867RPA19962.359ENSACAG00000014490RPA19962.742Anolis_carolinensis
ENSMICG00000012867RPA19891.211ENSANAG00000023456RPA110091.211Aotus_nancymaae
ENSMICG00000012867RPA19364.161ENSACLG00000006640rpa19964.161Astatotilapia_calliptera
ENSMICG00000012867RPA19958.713ENSACLG00000005223RPA19958.556Astatotilapia_calliptera
ENSMICG00000012867RPA19961.928ENSAMXG00000008418rpa19961.928Astyanax_mexicanus
ENSMICG00000012867RPA110091.396ENSBTAG00000009711RPA110091.396Bos_taurus
ENSMICG00000012867RPA17631.158WBGene00017546rpa-17131.158Caenorhabditis_elegans
ENSMICG00000012867RPA110091.558ENSCJAG00000001848RPA110091.558Callithrix_jacchus
ENSMICG00000012867RPA110091.558ENSCAFG00000019249RPA110091.558Canis_familiaris
ENSMICG00000012867RPA110091.558ENSCAFG00020009847RPA110091.558Canis_lupus_dingo
ENSMICG00000012867RPA110091.234ENSCHIG00000026308RPA110091.234Capra_hircus
ENSMICG00000012867RPA110091.410ENSTSYG00000003482-10091.410Carlito_syrichta
ENSMICG00000012867RPA110087.825ENSCPOG00000000035RPA110087.825Cavia_porcellus
ENSMICG00000012867RPA110080.291ENSCCAG00000010981RPA110080.291Cebus_capucinus
ENSMICG00000012867RPA110083.604ENSCLAG00000015045-10083.604Chinchilla_lanigera
ENSMICG00000012867RPA19988.762ENSCLAG00000005185-9988.762Chinchilla_lanigera
ENSMICG00000012867RPA110078.998ENSCSAG00000013833RPA110079.677Chlorocebus_sabaeus
ENSMICG00000012867RPA17192.255ENSCHOG00000009454-9992.202Choloepus_hoffmanni
ENSMICG00000012867RPA19588.265ENSCHOG00000013540-10088.265Choloepus_hoffmanni
ENSMICG00000012867RPA19976.911ENSCPBG00000020377RPA19977.544Chrysemys_picta_bellii
ENSMICG00000012867RPA19941.167ENSCING00000023482-9840.843Ciona_intestinalis
ENSMICG00000012867RPA19886.942ENSCANG00000030911RPA110086.942Colobus_angolensis_palliatus
ENSMICG00000012867RPA19989.806ENSCGRG00001008197Rpa19989.806Cricetulus_griseus_chok1gshd
ENSMICG00000012867RPA18188.363ENSCGRG00000000582Rpa19988.363Cricetulus_griseus_crigri
ENSMICG00000012867RPA19961.475ENSCSEG00000013066rpa19961.475Cynoglossus_semilaevis
ENSMICG00000012867RPA19952.139ENSCSEG00000012726RPA19953.675Cynoglossus_semilaevis
ENSMICG00000012867RPA19653.538ENSCVAG00000013446-8465.037Cyprinodon_variegatus
ENSMICG00000012867RPA19963.889ENSCVAG00000019431rpa19964.336Cyprinodon_variegatus
ENSMICG00000012867RPA19963.399ENSDARG00000003938rpa19963.072Danio_rerio
ENSMICG00000012867RPA19991.598ENSDNOG00000017218RPA19991.598Dasypus_novemcinctus
ENSMICG00000012867RPA110090.260ENSDORG00000006199Rpa110090.260Dipodomys_ordii
ENSMICG00000012867RPA19941.894FBgn0010173RpA-709842.055Drosophila_melanogaster
ENSMICG00000012867RPA18385.567ENSETEG00000017608RPA18285.567Echinops_telfairi
ENSMICG00000012867RPA19892.193ENSEASG00005009372RPA110089.822Equus_asinus_asinus
ENSMICG00000012867RPA110092.370ENSECAG00000023886RPA110092.370Equus_caballus
ENSMICG00000012867RPA16890.952ENSEEUG00000002186-6890.952Erinaceus_europaeus
ENSMICG00000012867RPA18856.538ENSELUG00000006136RPA19955.455Esox_lucius
ENSMICG00000012867RPA19961.990ENSELUG00000021071rpa19961.726Esox_lucius
ENSMICG00000012867RPA110089.141ENSFCAG00000006306RPA19988.817Felis_catus
ENSMICG00000012867RPA110074.313ENSFALG00000006575RPA19974.313Ficedula_albicollis
ENSMICG00000012867RPA19988.925ENSFDAG00000007720RPA19988.925Fukomys_damarensis
ENSMICG00000012867RPA19961.678ENSFHEG00000003580rpa19961.349Fundulus_heteroclitus
ENSMICG00000012867RPA19959.477ENSGMOG00000010382rpa19959.477Gadus_morhua
ENSMICG00000012867RPA110074.554ENSGALG00000003072RPA19974.554Gallus_gallus
ENSMICG00000012867RPA19953.373ENSGAFG00000020953RPA19953.373Gambusia_affinis
ENSMICG00000012867RPA19963.322ENSGAFG00000012916rpa19962.664Gambusia_affinis
ENSMICG00000012867RPA19961.438ENSGACG00000010856rpa19961.438Gasterosteus_aculeatus
ENSMICG00000012867RPA19976.911ENSGAGG00000013611RPA19976.911Gopherus_agassizii
ENSMICG00000012867RPA110087.500ENSGGOG00000014186RPA110087.500Gorilla_gorilla
ENSMICG00000012867RPA19963.607ENSHBUG00000017773rpa19963.607Haplochromis_burtoni
ENSMICG00000012867RPA19654.348ENSHBUG00000009348RPA19954.530Haplochromis_burtoni
ENSMICG00000012867RPA19989.251ENSHGLG00000008846RPA110089.251Heterocephalus_glaber_female
ENSMICG00000012867RPA110084.416ENSHGLG00100000799-10084.416Heterocephalus_glaber_male
ENSMICG00000012867RPA19989.251ENSHGLG00100017755-10089.251Heterocephalus_glaber_male
ENSMICG00000012867RPA110076.623ENSHGLG00100002005-10076.623Heterocephalus_glaber_male
ENSMICG00000012867RPA19960.292ENSHCOG00000001401rpa19960.778Hippocampus_comes
ENSMICG00000012867RPA19944.156ENSHCOG00000000351RPA19943.942Hippocampus_comes
ENSMICG00000012867RPA19962.500ENSIPUG00000004400rpa19962.013Ictalurus_punctatus
ENSMICG00000012867RPA19883.388ENSSTOG00000022475RPA19883.388Ictidomys_tridecemlineatus
ENSMICG00000012867RPA19590.306ENSJJAG00000000876Rpa19890.306Jaculus_jaculus
ENSMICG00000012867RPA19962.480ENSKMAG00000005605rpa19962.787Kryptolebias_marmoratus
ENSMICG00000012867RPA19954.443ENSKMAG00000000234RPA19954.120Kryptolebias_marmoratus
ENSMICG00000012867RPA19962.726ENSLBEG00000021604rpa19962.726Labrus_bergylta
ENSMICG00000012867RPA19862.642ENSLBEG00000002281RPA18463.023Labrus_bergylta
ENSMICG00000012867RPA18066.267ENSLACG00000007210RPA19966.068Latimeria_chalumnae
ENSMICG00000012867RPA19967.427ENSLOCG00000006397rpa19967.427Lepisosteus_oculatus
ENSMICG00000012867RPA19988.226ENSLAFG00000015354RPA19988.226Loxodonta_africana
ENSMICG00000012867RPA18290.316ENSMFAG00000036138-10091.124Macaca_fascicularis
ENSMICG00000012867RPA110084.416ENSMMUG00000002442-10084.416Macaca_mulatta
ENSMICG00000012867RPA19890.083ENSMMUG00000011604-10090.759Macaca_mulatta
ENSMICG00000012867RPA110075.728ENSMNEG00000029837-10092.000Macaca_nemestrina
ENSMICG00000012867RPA110087.175ENSMNEG00000031632-10087.844Macaca_nemestrina
ENSMICG00000012867RPA19884.488ENSMLEG00000038768-10085.173Mandrillus_leucophaeus
ENSMICG00000012867RPA19952.530ENSMAMG00000020097RPA19952.530Mastacembelus_armatus
ENSMICG00000012867RPA19963.770ENSMAMG00000017993rpa19963.770Mastacembelus_armatus
ENSMICG00000012867RPA19958.713ENSMZEG00005024731RPA19958.556Maylandia_zebra
ENSMICG00000012867RPA19963.607ENSMZEG00005007551rpa19963.607Maylandia_zebra
ENSMICG00000012867RPA19974.262ENSMGAG00000005315RPA19874.262Meleagris_gallopavo
ENSMICG00000012867RPA19791.167ENSMAUG00000010474Rpa19991.167Mesocricetus_auratus
ENSMICG00000012867RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSMICG00000012867RPA19757.286ENSMMOG00000010868RPA19757.286Mola_mola
ENSMICG00000012867RPA19961.639ENSMMOG00000014292rpa19962.881Mola_mola
ENSMICG00000012867RPA19984.039ENSMODG00000010549RPA19983.713Monodelphis_domestica
ENSMICG00000012867RPA19959.667ENSMALG00000001208RPA18363.721Monopterus_albus
ENSMICG00000012867RPA19964.321ENSMALG00000011453rpa19964.484Monopterus_albus
ENSMICG00000012867RPA19988.799MGP_CAROLIEiJ_G0016734Rpa19988.799Mus_caroli
ENSMICG00000012867RPA19986.495ENSMUSG00000000751Rpa19986.495Mus_musculus
ENSMICG00000012867RPA19989.661MGP_PahariEiJ_G0017871Rpa19989.661Mus_pahari
ENSMICG00000012867RPA19986.517MGP_SPRETEiJ_G0017577Rpa19986.517Mus_spretus
ENSMICG00000012867RPA110090.422ENSMPUG00000013119RPA110090.422Mustela_putorius_furo
ENSMICG00000012867RPA110087.279ENSMLUG00000006113RPA110087.279Myotis_lucifugus
ENSMICG00000012867RPA19588.455ENSNGAG00000004522Rpa19488.455Nannospalax_galili
ENSMICG00000012867RPA19463.951ENSNBRG00000020595rpa19963.951Neolamprologus_brichardi
ENSMICG00000012867RPA19656.514ENSNBRG00000009672RPA19556.514Neolamprologus_brichardi
ENSMICG00000012867RPA110089.935ENSNLEG00000017149RPA110090.438Nomascus_leucogenys
ENSMICG00000012867RPA19873.179ENSMEUG00000006714RPA19972.848Notamacropus_eugenii
ENSMICG00000012867RPA19586.097ENSODEG00000009038RPA19686.097Octodon_degus
ENSMICG00000012867RPA19963.754ENSONIG00000013135rpa19963.754Oreochromis_niloticus
ENSMICG00000012867RPA19882.919ENSOANG00000010880RPA19983.085Ornithorhynchus_anatinus
ENSMICG00000012867RPA110086.378ENSOCUG00000001504RPA110086.378Oryctolagus_cuniculus
ENSMICG00000012867RPA19953.528ENSORLG00000003368RPA19953.221Oryzias_latipes
ENSMICG00000012867RPA19964.204ENSORLG00000004856rpa19964.204Oryzias_latipes
ENSMICG00000012867RPA19964.052ENSORLG00020008980rpa19964.368Oryzias_latipes_hni
ENSMICG00000012867RPA19952.108ENSORLG00020015284RPA18463.953Oryzias_latipes_hni
ENSMICG00000012867RPA19954.062ENSORLG00015020383RPA19953.906Oryzias_latipes_hsok
ENSMICG00000012867RPA16762.077ENSORLG00015005867-9163.250Oryzias_latipes_hsok
ENSMICG00000012867RPA19964.052ENSORLG00015013982rpa19964.368Oryzias_latipes_hsok
ENSMICG00000012867RPA19457.804ENSOMEG00000011040RPA19957.338Oryzias_melastigma
ENSMICG00000012867RPA19961.827ENSOMEG00000004704rpa19961.827Oryzias_melastigma
ENSMICG00000012867RPA19489.474ENSOGAG00000029379-10089.474Otolemur_garnettii
ENSMICG00000012867RPA110091.558ENSOGAG00000005581-10091.558Otolemur_garnettii
ENSMICG00000012867RPA110091.396ENSOARG00000014479RPA110091.396Ovis_aries
ENSMICG00000012867RPA110090.260ENSPPAG00000039680RPA110090.762Pan_paniscus
ENSMICG00000012867RPA110088.979ENSPPRG00000011807RPA19988.655Panthera_pardus
ENSMICG00000012867RPA110088.817ENSPTIG00000007898RPA19988.493Panthera_tigris_altaica
ENSMICG00000012867RPA110090.260ENSPTRG00000008539RPA110090.762Pan_troglodytes
ENSMICG00000012867RPA110090.422ENSPANG00000024592RPA110091.086Papio_anubis
ENSMICG00000012867RPA19463.122ENSPKIG00000008053rpa19463.465Paramormyrops_kingsleyae
ENSMICG00000012867RPA19775.833ENSPSIG00000015617RPA19975.833Pelodiscus_sinensis
ENSMICG00000012867RPA19861.231ENSPMGG00000011589rpa19960.899Periophthalmus_magnuspinnatus
ENSMICG00000012867RPA19954.516ENSPMGG00000000543RPA19956.643Periophthalmus_magnuspinnatus
ENSMICG00000012867RPA19990.375ENSPEMG00000021061Rpa19990.375Peromyscus_maniculatus_bairdii
ENSMICG00000012867RPA110082.658ENSPCIG00000019049RPA19982.496Phascolarctos_cinereus
ENSMICG00000012867RPA19963.295ENSPFOG00000003987rpa19962.643Poecilia_formosa
ENSMICG00000012867RPA19454.267ENSPLAG00000008844-9754.267Poecilia_latipinna
ENSMICG00000012867RPA19962.908ENSPLAG00000004984rpa19962.745Poecilia_latipinna
ENSMICG00000012867RPA19454.341ENSPMEG00000003627-9754.341Poecilia_mexicana
ENSMICG00000012867RPA19963.295ENSPMEG00000020602rpa19963.304Poecilia_mexicana
ENSMICG00000012867RPA19952.811ENSPREG00000010119RPA110052.396Poecilia_reticulata
ENSMICG00000012867RPA19455.973ENSPREG00000010174rpa19655.631Poecilia_reticulata
ENSMICG00000012867RPA110097.565ENSPCOG00000001799RPA110097.565Propithecus_coquereli
ENSMICG00000012867RPA110090.422ENSPVAG00000002149RPA110090.422Pteropus_vampyrus
ENSMICG00000012867RPA19963.770ENSPNYG00000016316rpa19964.111Pundamilia_nyererei
ENSMICG00000012867RPA19958.399ENSPNYG00000024165RPA19958.242Pundamilia_nyererei
ENSMICG00000012867RPA19855.150ENSPNAG00000008599rpa19952.894Pygocentrus_nattereri
ENSMICG00000012867RPA19989.396ENSRNOG00000003123Rpa19989.396Rattus_norvegicus
ENSMICG00000012867RPA110090.276ENSRBIG00000036587RPA110090.276Rhinopithecus_bieti
ENSMICG00000012867RPA110084.603ENSRROG00000043278RPA110084.603Rhinopithecus_roxellana
ENSMICG00000012867RPA19731.588YAR007CRFA19731.588Saccharomyces_cerevisiae
ENSMICG00000012867RPA19887.252ENSSBOG00000030233RPA19987.252Saimiri_boliviensis_boliviensis
ENSMICG00000012867RPA19983.934ENSSHAG00000007969RPA19883.934Sarcophilus_harrisii
ENSMICG00000012867RPA19965.309ENSSFOG00015005362rpa19264.658Scleropages_formosus
ENSMICG00000012867RPA19952.496ENSSMAG00000019746RPA19952.496Scophthalmus_maximus
ENSMICG00000012867RPA18965.581ENSSDUG00000016358RPA18565.581Seriola_dumerili
ENSMICG00000012867RPA19964.262ENSSDUG00000011949rpa19964.262Seriola_dumerili
ENSMICG00000012867RPA19949.927ENSSLDG00000020784RPA18465.429Seriola_lalandi_dorsalis
ENSMICG00000012867RPA19964.262ENSSLDG00000011806rpa19964.262Seriola_lalandi_dorsalis
ENSMICG00000012867RPA18882.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSMICG00000012867RPA19772.315ENSSPUG00000007223RPA19972.315Sphenodon_punctatus
ENSMICG00000012867RPA19963.607ENSSPAG00000009903rpa19963.607Stegastes_partitus
ENSMICG00000012867RPA19658.883ENSSPAG00000011165RPA19758.545Stegastes_partitus
ENSMICG00000012867RPA19889.884ENSSSCG00000017822RPA110089.884Sus_scrofa
ENSMICG00000012867RPA110074.230ENSTGUG00000005775RPA19974.230Taeniopygia_guttata
ENSMICG00000012867RPA19954.702ENSTRUG00000000405RPA18557.374Takifugu_rubripes
ENSMICG00000012867RPA19963.651ENSTRUG00000003616rpa19963.651Takifugu_rubripes
ENSMICG00000012867RPA19964.286ENSTNIG00000016199rpa19964.286Tetraodon_nigroviridis
ENSMICG00000012867RPA187100.000ENSTBEG00000002709RPA180100.000Tupaia_belangeri
ENSMICG00000012867RPA19989.902ENSTTRG00000001169RPA19989.902Tursiops_truncatus
ENSMICG00000012867RPA18896.154ENSUAMG00000015676RPA19796.154Ursus_americanus
ENSMICG00000012867RPA110091.396ENSUMAG00000009328RPA110091.396Ursus_maritimus
ENSMICG00000012867RPA110088.961ENSVPAG00000009443RPA110088.961Vicugna_pacos
ENSMICG00000012867RPA110091.234ENSVVUG00000021715RPA110091.234Vulpes_vulpes
ENSMICG00000012867RPA19973.520ENSXETG00000013538rpa19874.056Xenopus_tropicalis
ENSMICG00000012867RPA19262.081ENSXCOG00000010068rpa19660.239Xiphophorus_couchianus
ENSMICG00000012867RPA19555.631ENSXCOG00000009899-9955.631Xiphophorus_couchianus
ENSMICG00000012867RPA19961.990ENSXMAG00000004102rpa19962.982Xiphophorus_maculatus
ENSMICG00000012867RPA19663.326ENSXMAG00000010333RPA18363.953Xiphophorus_maculatus

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