EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000012943 (Gene tree)
Gene ID: 105857920
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 12373 bases
Position: chr16:48008286-48020658
Accession: 105857920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000011799	AARP2CN	PF08142.12	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000012948	TSR1-202	2661	XM_012740653	ENSMICP00000011799	802 (aa)	XP_012596107	UPI0006432946
ENSMICT00000070608	TSR1-201	3013	-	ENSMICP00000047627	209 (aa)	-	UPI000C2EAFC2

Gene Model

Click here to download ENSMICG00000012943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000012943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000012943	TSR1	100	90.943	ENSG00000167721	TSR1	100	91.439	Homo_sapiens
ENSMICG00000012943	TSR1	99	55.036	ENSAPOG00000020891	tsr1	99	55.596	Acanthochromis_polyacanthus
ENSMICG00000012943	TSR1	100	89.681	ENSAMEG00000007599	TSR1	99	89.189	Ailuropoda_melanoleuca
ENSMICG00000012943	TSR1	99	57.707	ENSACIG00000007090	tsr1	99	57.726	Amphilophus_citrinellus
ENSMICG00000012943	TSR1	99	56.386	ENSAOCG00000023284	tsr1	99	55.623	Amphiprion_ocellaris
ENSMICG00000012943	TSR1	94	56.923	ENSAPEG00000008452	tsr1	100	56.113	Amphiprion_percula
ENSMICG00000012943	TSR1	99	54.545	ENSATEG00000021961	tsr1	99	55.861	Anabas_testudineus
ENSMICG00000012943	TSR1	90	70.274	ENSAPLG00000013422	TSR1	98	70.411	Anas_platyrhynchos
ENSMICG00000012943	TSR1	73	57.596	ENSACAG00000000859	TSR1	94	57.262	Anolis_carolinensis
ENSMICG00000012943	TSR1	100	91.542	ENSANAG00000031071	TSR1	100	91.791	Aotus_nancymaae
ENSMICG00000012943	TSR1	99	56.401	ENSACLG00000007595	tsr1	99	56.000	Astatotilapia_calliptera
ENSMICG00000012943	TSR1	50	50.847	ENSAMXG00000008470	tsr1	90	50.345	Astyanax_mexicanus
ENSMICG00000012943	TSR1	100	92.537	ENSBTAG00000004225	TSR1	100	92.537	Bos_taurus
ENSMICG00000012943	TSR1	97	38.742	WBGene00006497	tag-151	96	39.698	Caenorhabditis_elegans
ENSMICG00000012943	TSR1	100	91.542	ENSCJAG00000012456	TSR1	100	91.791	Callithrix_jacchus
ENSMICG00000012943	TSR1	90	89.669	ENSCAFG00000019273	-	100	89.954	Canis_familiaris
ENSMICG00000012943	TSR1	100	90.186	ENSCAFG00000002106	-	100	90.186	Canis_familiaris
ENSMICG00000012943	TSR1	100	89.814	ENSCAFG00020009728	TSR1	100	89.814	Canis_lupus_dingo
ENSMICG00000012943	TSR1	100	93.159	ENSCHIG00000023935	TSR1	100	93.159	Capra_hircus
ENSMICG00000012943	TSR1	100	92.289	ENSTSYG00000005468	TSR1	100	92.164	Carlito_syrichta
ENSMICG00000012943	TSR1	93	88.874	ENSCPOG00000014833	TSR1	99	88.874	Cavia_porcellus
ENSMICG00000012943	TSR1	93	92.225	ENSCCAG00000028962	TSR1	98	91.823	Cebus_capucinus
ENSMICG00000012943	TSR1	100	91.811	ENSCATG00000044262	TSR1	100	91.687	Cercocebus_atys
ENSMICG00000012943	TSR1	100	88.806	ENSCLAG00000005567	TSR1	100	88.557	Chinchilla_lanigera
ENSMICG00000012943	TSR1	100	91.563	ENSCSAG00000013788	TSR1	100	91.811	Chlorocebus_sabaeus
ENSMICG00000012943	TSR1	99	70.412	ENSCPBG00000020363	TSR1	97	71.411	Chrysemys_picta_bellii
ENSMICG00000012943	TSR1	97	46.742	ENSCING00000020658	-	99	46.675	Ciona_intestinalis
ENSMICG00000012943	TSR1	97	45.603	ENSCSAVG00000001875	-	100	45.101	Ciona_savignyi
ENSMICG00000012943	TSR1	100	83.831	ENSCANG00000033056	TSR1	100	81.390	Colobus_angolensis_palliatus
ENSMICG00000012943	TSR1	100	87.205	ENSCGRG00001023942	Tsr1	100	87.205	Cricetulus_griseus_chok1gshd
ENSMICG00000012943	TSR1	100	80.549	ENSCGRG00000013015	Tsr1	100	82.170	Cricetulus_griseus_crigri
ENSMICG00000012943	TSR1	99	55.596	ENSCSEG00000013009	tsr1	99	56.242	Cynoglossus_semilaevis
ENSMICG00000012943	TSR1	99	56.174	ENSCVAG00000000506	tsr1	99	56.136	Cyprinodon_variegatus
ENSMICG00000012943	TSR1	99	54.644	ENSDARG00000007744	tsr1	99	55.460	Danio_rerio
ENSMICG00000012943	TSR1	100	90.920	ENSDNOG00000004715	TSR1	100	90.299	Dasypus_novemcinctus
ENSMICG00000012943	TSR1	100	87.935	ENSDORG00000016371	-	100	87.935	Dipodomys_ordii
ENSMICG00000012943	TSR1	97	76.607	ENSDORG00000023234	-	100	76.607	Dipodomys_ordii
ENSMICG00000012943	TSR1	97	42.928	FBgn0037073	Tsr1	96	43.478	Drosophila_melanogaster
ENSMICG00000012943	TSR1	92	90.492	ENSETEG00000017534	TSR1	91	90.492	Echinops_telfairi
ENSMICG00000012943	TSR1	96	53.905	ENSEBUG00000013731	TSR1	98	53.333	Eptatretus_burgeri
ENSMICG00000012943	TSR1	100	92.413	ENSEASG00005009302	TSR1	97	92.413	Equus_asinus_asinus
ENSMICG00000012943	TSR1	100	92.413	ENSECAG00000009114	TSR1	100	92.413	Equus_caballus
ENSMICG00000012943	TSR1	99	55.515	ENSELUG00000020984	tsr1	95	55.636	Esox_lucius
ENSMICG00000012943	TSR1	100	91.667	ENSFCAG00000006313	TSR1	100	91.667	Felis_catus
ENSMICG00000012943	TSR1	99	69.581	ENSFALG00000006532	TSR1	99	70.074	Ficedula_albicollis
ENSMICG00000012943	TSR1	100	89.290	ENSFDAG00000006038	TSR1	100	89.664	Fukomys_damarensis
ENSMICG00000012943	TSR1	99	55.422	ENSFHEG00000003626	tsr1	99	55.904	Fundulus_heteroclitus
ENSMICG00000012943	TSR1	99	54.523	ENSGMOG00000010336	tsr1	99	54.945	Gadus_morhua
ENSMICG00000012943	TSR1	99	54.885	ENSGAFG00000012993	tsr1	99	55.932	Gambusia_affinis
ENSMICG00000012943	TSR1	99	55.760	ENSGACG00000010843	tsr1	99	56.020	Gasterosteus_aculeatus
ENSMICG00000012943	TSR1	99	71.429	ENSGAGG00000025619	-	99	71.712	Gopherus_agassizii
ENSMICG00000012943	TSR1	100	91.315	ENSGGOG00000001704	TSR1	100	91.687	Gorilla_gorilla
ENSMICG00000012943	TSR1	99	55.957	ENSHBUG00000017904	tsr1	100	56.923	Haplochromis_burtoni
ENSMICG00000012943	TSR1	97	78.920	ENSHGLG00000015688	-	99	78.149	Heterocephalus_glaber_female
ENSMICG00000012943	TSR1	100	90.050	ENSHGLG00000012806	-	100	90.050	Heterocephalus_glaber_female
ENSMICG00000012943	TSR1	100	90.050	ENSHGLG00100015392	TSR1	100	90.050	Heterocephalus_glaber_male
ENSMICG00000012943	TSR1	99	56.860	ENSHCOG00000001432	tsr1	99	56.860	Hippocampus_comes
ENSMICG00000012943	TSR1	99	55.676	ENSIPUG00000004618	tsr1	99	56.280	Ictalurus_punctatus
ENSMICG00000012943	TSR1	100	89.826	ENSSTOG00000011819	TSR1	100	89.578	Ictidomys_tridecemlineatus
ENSMICG00000012943	TSR1	92	81.436	ENSJJAG00000019505	Tsr1	95	80.868	Jaculus_jaculus
ENSMICG00000012943	TSR1	99	55.422	ENSKMAG00000005763	tsr1	99	56.000	Kryptolebias_marmoratus
ENSMICG00000012943	TSR1	99	55.889	ENSLBEG00000021823	tsr1	99	55.368	Labrus_bergylta
ENSMICG00000012943	TSR1	99	64.865	ENSLACG00000002197	TSR1	99	64.251	Latimeria_chalumnae
ENSMICG00000012943	TSR1	90	58.271	ENSLOCG00000006491	TSR1	97	58.333	Lepisosteus_oculatus
ENSMICG00000012943	TSR1	100	91.811	ENSMFAG00000021330	TSR1	100	92.060	Macaca_fascicularis
ENSMICG00000012943	TSR1	100	91.439	ENSMMUG00000017519	TSR1	100	91.687	Macaca_mulatta
ENSMICG00000012943	TSR1	100	91.439	ENSMNEG00000031382	TSR1	100	91.687	Macaca_nemestrina
ENSMICG00000012943	TSR1	100	91.687	ENSMLEG00000036733	TSR1	100	91.563	Mandrillus_leucophaeus
ENSMICG00000012943	TSR1	99	55.185	ENSMAMG00000017918	tsr1	99	55.383	Mastacembelus_armatus
ENSMICG00000012943	TSR1	99	56.695	ENSMZEG00005007477	tsr1	99	55.932	Maylandia_zebra
ENSMICG00000012943	TSR1	99	68.395	ENSMGAG00000005576	TSR1	99	69.127	Meleagris_gallopavo
ENSMICG00000012943	TSR1	100	85.839	ENSMOCG00000022764	Tsr1	100	86.708	Microtus_ochrogaster
ENSMICG00000012943	TSR1	99	56.326	ENSMMOG00000014280	tsr1	99	56.410	Mola_mola
ENSMICG00000012943	TSR1	100	79.379	ENSMODG00000010658	TSR1	100	79.130	Monodelphis_domestica
ENSMICG00000012943	TSR1	98	56.829	ENSMALG00000011681	tsr1	98	56.916	Monopterus_albus
ENSMICG00000012943	TSR1	100	86.443	MGP_CAROLIEiJ_G0016727	Tsr1	100	86.318	Mus_caroli
ENSMICG00000012943	TSR1	100	87.438	ENSMUSG00000038335	Tsr1	100	87.313	Mus_musculus
ENSMICG00000012943	TSR1	100	87.313	MGP_PahariEiJ_G0017864	Tsr1	100	87.189	Mus_pahari
ENSMICG00000012943	TSR1	100	87.438	MGP_SPRETEiJ_G0017570	Tsr1	100	87.313	Mus_spretus
ENSMICG00000012943	TSR1	82	89.482	ENSMPUG00000013000	TSR1	100	89.482	Mustela_putorius_furo
ENSMICG00000012943	TSR1	100	93.408	ENSMLUG00000003505	TSR1	100	93.408	Myotis_lucifugus
ENSMICG00000012943	TSR1	99	55.889	ENSNBRG00000020728	tsr1	99	56.092	Neolamprologus_brichardi
ENSMICG00000012943	TSR1	100	83.791	ENSNLEG00000017184	TSR1	100	85.661	Nomascus_leucogenys
ENSMICG00000012943	TSR1	99	73.526	ENSMEUG00000015828	TSR1	99	73.592	Notamacropus_eugenii
ENSMICG00000012943	TSR1	99	55.971	ENSONIG00000013131	tsr1	99	56.516	Oreochromis_niloticus
ENSMICG00000012943	TSR1	96	75.321	ENSOANG00000008637	TSR1	100	74.679	Ornithorhynchus_anatinus
ENSMICG00000012943	TSR1	100	90.672	ENSOCUG00000014256	TSR1	100	90.672	Oryctolagus_cuniculus
ENSMICG00000012943	TSR1	99	55.288	ENSORLG00000004926	tsr1	99	56.333	Oryzias_latipes
ENSMICG00000012943	TSR1	99	55.957	ENSORLG00020008792	tsr1	99	56.522	Oryzias_latipes_hni
ENSMICG00000012943	TSR1	99	55.168	ENSORLG00015013838	tsr1	99	56.212	Oryzias_latipes_hsok
ENSMICG00000012943	TSR1	99	55.127	ENSOMEG00000004830	tsr1	99	56.416	Oryzias_melastigma
ENSMICG00000012943	TSR1	100	92.972	ENSOGAG00000004492	TSR1	100	92.602	Otolemur_garnettii
ENSMICG00000012943	TSR1	100	93.035	ENSOARG00000015437	TSR1	97	93.035	Ovis_aries
ENSMICG00000012943	TSR1	100	91.067	ENSPPAG00000036355	TSR1	100	91.563	Pan_paniscus
ENSMICG00000012943	TSR1	100	91.418	ENSPPRG00000015519	-	100	91.418	Panthera_pardus
ENSMICG00000012943	TSR1	100	91.667	ENSPTIG00000010608	TSR1	100	91.667	Panthera_tigris_altaica
ENSMICG00000012943	TSR1	100	91.067	ENSPTRG00000008547	TSR1	100	91.563	Pan_troglodytes
ENSMICG00000012943	TSR1	100	88.337	ENSPANG00000024463	TSR1	100	88.089	Papio_anubis
ENSMICG00000012943	TSR1	99	55.460	ENSPKIG00000013972	tsr1	99	55.951	Paramormyrops_kingsleyae
ENSMICG00000012943	TSR1	88	69.774	ENSPSIG00000018258	TSR1	100	70.381	Pelodiscus_sinensis
ENSMICG00000012943	TSR1	99	58.603	ENSPMGG00000011577	tsr1	98	58.479	Periophthalmus_magnuspinnatus
ENSMICG00000012943	TSR1	100	86.318	ENSPEMG00000018033	Tsr1	100	86.318	Peromyscus_maniculatus_bairdii
ENSMICG00000012943	TSR1	100	79.404	ENSPCIG00000009357	TSR1	98	80.222	Phascolarctos_cinereus
ENSMICG00000012943	TSR1	99	55.664	ENSPFOG00000004483	TSR1	99	56.760	Poecilia_formosa
ENSMICG00000012943	TSR1	99	55.665	ENSPLAG00000022320	tsr1	99	55.966	Poecilia_latipinna
ENSMICG00000012943	TSR1	99	54.753	ENSPMEG00000004577	tsr1	99	55.716	Poecilia_mexicana
ENSMICG00000012943	TSR1	97	55.390	ENSPREG00000010354	tsr1	95	55.569	Poecilia_reticulata
ENSMICG00000012943	TSR1	100	83.457	ENSPPYG00000007792	TSR1	100	83.333	Pongo_abelii
ENSMICG00000012943	TSR1	53	93.023	ENSPCAG00000012973	-	72	93.023	Procavia_capensis
ENSMICG00000012943	TSR1	100	97.880	ENSPCOG00000017928	TSR1	100	97.880	Propithecus_coquereli
ENSMICG00000012943	TSR1	100	91.542	ENSPVAG00000002162	TSR1	100	91.667	Pteropus_vampyrus
ENSMICG00000012943	TSR1	99	56.401	ENSPNYG00000016163	tsr1	99	56.000	Pundamilia_nyererei
ENSMICG00000012943	TSR1	99	54.622	ENSPNAG00000008659	tsr1	99	54.982	Pygocentrus_nattereri
ENSMICG00000012943	TSR1	100	86.211	ENSRNOG00000002980	Tsr1	100	86.087	Rattus_norvegicus
ENSMICG00000012943	TSR1	100	91.315	ENSRBIG00000040016	TSR1	100	91.315	Rhinopithecus_bieti
ENSMICG00000012943	TSR1	100	91.191	ENSRROG00000030361	TSR1	100	91.191	Rhinopithecus_roxellana
ENSMICG00000012943	TSR1	96	30.370	YDL060W	-	98	30.370	Saccharomyces_cerevisiae
ENSMICG00000012943	TSR1	100	91.915	ENSSBOG00000020785	TSR1	100	92.413	Saimiri_boliviensis_boliviensis
ENSMICG00000012943	TSR1	100	77.323	ENSSHAG00000011394	TSR1	100	77.323	Sarcophilus_harrisii
ENSMICG00000012943	TSR1	99	57.301	ENSSFOG00015005455	tsr1	99	57.301	Scleropages_formosus
ENSMICG00000012943	TSR1	99	55.755	ENSSMAG00000009504	tsr1	99	55.904	Scophthalmus_maximus
ENSMICG00000012943	TSR1	99	55.716	ENSSDUG00000012074	tsr1	99	55.957	Seriola_dumerili
ENSMICG00000012943	TSR1	99	56.971	ENSSLDG00000002031	tsr1	99	56.212	Seriola_lalandi_dorsalis
ENSMICG00000012943	TSR1	100	77.861	ENSSARG00000000759	TSR1	100	77.861	Sorex_araneus
ENSMICG00000012943	TSR1	99	69.077	ENSSPUG00000007042	TSR1	98	68.953	Sphenodon_punctatus
ENSMICG00000012943	TSR1	99	54.731	ENSSPAG00000021951	tsr1	99	55.769	Stegastes_partitus
ENSMICG00000012943	TSR1	100	92.164	ENSSSCG00000038534	TSR1	100	92.164	Sus_scrofa
ENSMICG00000012943	TSR1	90	71.020	ENSTGUG00000005883	TSR1	100	71.448	Taeniopygia_guttata
ENSMICG00000012943	TSR1	99	56.553	ENSTRUG00000004665	tsr1	99	57.039	Takifugu_rubripes
ENSMICG00000012943	TSR1	99	57.160	ENSTNIG00000016196	tsr1	99	57.407	Tetraodon_nigroviridis
ENSMICG00000012943	TSR1	67	96.154	ENSTBEG00000015275	-	67	96.154	Tupaia_belangeri
ENSMICG00000012943	TSR1	100	92.040	ENSTTRG00000001177	TSR1	100	92.040	Tursiops_truncatus
ENSMICG00000012943	TSR1	100	89.677	ENSUAMG00000025160	TSR1	99	90.356	Ursus_americanus
ENSMICG00000012943	TSR1	97	89.514	ENSUMAG00000009294	TSR1	99	89.514	Ursus_maritimus
ENSMICG00000012943	TSR1	84	88.559	ENSVPAG00000000228	TSR1	100	88.559	Vicugna_pacos
ENSMICG00000012943	TSR1	100	89.565	ENSVVUG00000021767	TSR1	100	89.565	Vulpes_vulpes
ENSMICG00000012943	TSR1	99	60.294	ENSXETG00000023797	tsr1	100	61.436	Xenopus_tropicalis
ENSMICG00000012943	TSR1	99	56.143	ENSXCOG00000009635	tsr1	99	56.757	Xiphophorus_couchianus
ENSMICG00000012943	TSR1	99	54.524	ENSXMAG00000001397	tsr1	96	55.811	Xiphophorus_maculatus