EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000013018 (Gene tree)
Gene ID: 105865753
Gene Symbol: -
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 57276 bases
Position: chr19:79839872-79897147
Accession: 105865753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000011869	Exo_endo_phos	PF03372.23	4.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000013022	-	1647	XM_020282103	ENSMICP00000011869	548 (aa)	XP_020137692	UPI000C2EC9CE

Gene Model

Click here to download ENSMICG00000013018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000013018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000013018	-	63	30.199	ENSMICG00000005723	PDE12	52	30.199
ENSMICG00000013018	-	100	76.481	ENSMICG00000017026	CNOT6L	99	76.481
ENSMICG00000013018	-	98	87.500	ENSMICG00000028378	-	99	87.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000013018	-	100	96.050	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSMICG00000013018	-	100	85.331	ENSAPOG00000009994	cnot6b	100	85.331	Acanthochromis_polyacanthus
ENSMICG00000013018	-	100	96.243	ENSAMEG00000000949	CNOT6	99	96.243	Ailuropoda_melanoleuca
ENSMICG00000013018	-	100	84.258	ENSACIG00000016566	cnot6b	100	84.258	Amphilophus_citrinellus
ENSMICG00000013018	-	100	85.331	ENSAOCG00000006893	cnot6b	100	85.331	Amphiprion_ocellaris
ENSMICG00000013018	-	100	85.331	ENSAPEG00000016949	cnot6b	100	85.331	Amphiprion_percula
ENSMICG00000013018	-	100	83.184	ENSATEG00000007862	cnot6b	100	83.184	Anabas_testudineus
ENSMICG00000013018	-	100	94.255	ENSAPLG00000012715	CNOT6	99	94.255	Anas_platyrhynchos
ENSMICG00000013018	-	100	92.101	ENSACAG00000016548	CNOT6	100	92.101	Anolis_carolinensis
ENSMICG00000013018	-	100	96.409	ENSANAG00000030436	CNOT6	96	96.409	Aotus_nancymaae
ENSMICG00000013018	-	100	83.542	ENSACLG00000008279	cnot6b	100	84.436	Astatotilapia_calliptera
ENSMICG00000013018	-	100	84.946	ENSAMXG00000019140	cnot6a	100	84.946	Astyanax_mexicanus
ENSMICG00000013018	-	100	83.333	ENSAMXG00000034694	cnot6b	100	83.333	Astyanax_mexicanus
ENSMICG00000013018	-	100	95.871	ENSBTAG00000017362	CNOT6	100	95.871	Bos_taurus
ENSMICG00000013018	-	100	96.230	ENSCJAG00000009795	CNOT6	100	96.230	Callithrix_jacchus
ENSMICG00000013018	-	100	96.589	ENSCAFG00000000464	CNOT6	100	96.589	Canis_familiaris
ENSMICG00000013018	-	100	96.589	ENSCAFG00020002441	CNOT6	100	96.589	Canis_lupus_dingo
ENSMICG00000013018	-	100	95.512	ENSCHIG00000019100	CNOT6	100	95.512	Capra_hircus
ENSMICG00000013018	-	100	94.794	ENSTSYG00000003982	CNOT6	100	94.794	Carlito_syrichta
ENSMICG00000013018	-	100	90.485	ENSCPOG00000035657	CNOT6	100	90.485	Cavia_porcellus
ENSMICG00000013018	-	100	91.921	ENSCCAG00000033670	CNOT6	100	91.921	Cebus_capucinus
ENSMICG00000013018	-	100	96.050	ENSCATG00000042014	CNOT6	100	96.050	Cercocebus_atys
ENSMICG00000013018	-	100	94.255	ENSCLAG00000010489	CNOT6	100	94.255	Chinchilla_lanigera
ENSMICG00000013018	-	100	96.050	ENSCSAG00000008165	CNOT6	100	96.050	Chlorocebus_sabaeus
ENSMICG00000013018	-	100	94.255	ENSCHOG00000009680	CNOT6	100	94.255	Choloepus_hoffmanni
ENSMICG00000013018	-	100	93.716	ENSCPBG00000008908	CNOT6	100	93.716	Chrysemys_picta_bellii
ENSMICG00000013018	-	100	96.230	ENSCANG00000026756	CNOT6	100	96.230	Colobus_angolensis_palliatus
ENSMICG00000013018	-	100	93.537	ENSCGRG00001011452	Cnot6	100	93.537	Cricetulus_griseus_chok1gshd
ENSMICG00000013018	-	100	91.921	ENSCGRG00000010407	Cnot6	100	91.921	Cricetulus_griseus_crigri
ENSMICG00000013018	-	100	84.079	ENSCSEG00000010939	cnot6b	100	84.079	Cynoglossus_semilaevis
ENSMICG00000013018	-	100	83.871	ENSCVAG00000010538	cnot6b	100	83.871	Cyprinodon_variegatus
ENSMICG00000013018	-	100	84.588	ENSDARG00000008255	cnot6a	100	84.588	Danio_rerio
ENSMICG00000013018	-	100	82.258	ENSDARG00000101072	cnot6b	100	82.258	Danio_rerio
ENSMICG00000013018	-	100	95.512	ENSDNOG00000041644	CNOT6	100	95.512	Dasypus_novemcinctus
ENSMICG00000013018	-	100	85.099	ENSDORG00000001708	Cnot6	100	85.099	Dipodomys_ordii
ENSMICG00000013018	-	100	77.996	ENSETEG00000006975	CNOT6	100	77.996	Echinops_telfairi
ENSMICG00000013018	-	100	95.332	ENSEASG00005012794	-	100	95.332	Equus_asinus_asinus
ENSMICG00000013018	-	90	89.400	ENSEASG00005012957	-	99	89.400	Equus_asinus_asinus
ENSMICG00000013018	-	100	89.408	ENSECAG00000012704	-	99	89.408	Equus_caballus
ENSMICG00000013018	-	100	96.050	ENSECAG00000019325	CNOT6	100	96.050	Equus_caballus
ENSMICG00000013018	-	100	95.153	ENSEEUG00000015382	CNOT6	100	95.153	Erinaceus_europaeus
ENSMICG00000013018	-	100	80.287	ENSELUG00000024580	cnot6a	100	80.287	Esox_lucius
ENSMICG00000013018	-	100	81.834	ENSELUG00000015981	cnot6b	99	81.834	Esox_lucius
ENSMICG00000013018	-	100	96.589	ENSFCAG00000001881	CNOT6	100	96.589	Felis_catus
ENSMICG00000013018	-	100	94.255	ENSFALG00000007699	CNOT6	100	94.255	Ficedula_albicollis
ENSMICG00000013018	-	100	94.255	ENSFDAG00000001999	CNOT6	100	94.255	Fukomys_damarensis
ENSMICG00000013018	-	64	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSMICG00000013018	-	95	83.176	ENSGMOG00000009767	cnot6b	99	83.176	Gadus_morhua
ENSMICG00000013018	-	100	94.255	ENSGALG00000034316	CNOT6	100	94.255	Gallus_gallus
ENSMICG00000013018	-	100	84.229	ENSGAFG00000008525	cnot6b	100	84.229	Gambusia_affinis
ENSMICG00000013018	-	95	81.474	ENSGACG00000018046	cnot6b	99	81.474	Gasterosteus_aculeatus
ENSMICG00000013018	-	100	80.657	ENSGAGG00000012176	CNOT6	100	80.657	Gopherus_agassizii
ENSMICG00000013018	-	100	96.050	ENSGGOG00000003675	CNOT6	100	96.050	Gorilla_gorilla
ENSMICG00000013018	-	100	83.721	ENSHBUG00000002819	cnot6b	100	84.615	Haplochromis_burtoni
ENSMICG00000013018	-	100	94.434	ENSHGLG00000017756	CNOT6	100	94.434	Heterocephalus_glaber_female
ENSMICG00000013018	-	100	94.434	ENSHGLG00100005747	CNOT6	100	94.434	Heterocephalus_glaber_male
ENSMICG00000013018	-	100	81.932	ENSHCOG00000016176	cnot6b	100	82.826	Hippocampus_comes
ENSMICG00000013018	-	100	83.154	ENSIPUG00000017482	cnot6b	100	83.154	Ictalurus_punctatus
ENSMICG00000013018	-	100	83.871	ENSIPUG00000019831	cnot6a	100	83.871	Ictalurus_punctatus
ENSMICG00000013018	-	100	95.691	ENSSTOG00000002803	CNOT6	100	95.691	Ictidomys_tridecemlineatus
ENSMICG00000013018	-	100	93.716	ENSJJAG00000012296	Cnot6	100	93.716	Jaculus_jaculus
ENSMICG00000013018	-	100	84.946	ENSKMAG00000004640	cnot6b	100	84.946	Kryptolebias_marmoratus
ENSMICG00000013018	-	100	82.290	ENSLBEG00000027917	cnot6b	100	83.184	Labrus_bergylta
ENSMICG00000013018	-	100	87.993	ENSLOCG00000010102	cnot6b	99	87.993	Lepisosteus_oculatus
ENSMICG00000013018	-	100	96.050	ENSLAFG00000016742	CNOT6	100	96.050	Loxodonta_africana
ENSMICG00000013018	-	100	96.050	ENSMFAG00000030867	CNOT6	100	96.050	Macaca_fascicularis
ENSMICG00000013018	-	100	96.050	ENSMMUG00000018690	CNOT6	100	96.050	Macaca_mulatta
ENSMICG00000013018	-	100	96.050	ENSMNEG00000038565	CNOT6	100	96.050	Macaca_nemestrina
ENSMICG00000013018	-	100	96.050	ENSMLEG00000010555	CNOT6	100	96.050	Mandrillus_leucophaeus
ENSMICG00000013018	-	100	85.152	ENSMAMG00000007515	cnot6b	100	85.152	Mastacembelus_armatus
ENSMICG00000013018	-	100	83.542	ENSMZEG00005012899	cnot6b	100	84.436	Maylandia_zebra
ENSMICG00000013018	-	100	94.614	ENSMAUG00000019798	Cnot6	100	94.614	Mesocricetus_auratus
ENSMICG00000013018	-	100	94.614	ENSMOCG00000021662	Cnot6	100	94.614	Microtus_ochrogaster
ENSMICG00000013018	-	100	82.616	ENSMMOG00000003227	cnot6b	100	82.616	Mola_mola
ENSMICG00000013018	-	100	94.255	ENSMODG00000003979	CNOT6	100	94.255	Monodelphis_domestica
ENSMICG00000013018	-	100	84.794	ENSMALG00000014251	cnot6b	100	84.794	Monopterus_albus
ENSMICG00000013018	-	100	94.794	MGP_CAROLIEiJ_G0016277	Cnot6	100	94.794	Mus_caroli
ENSMICG00000013018	-	100	94.794	ENSMUSG00000020362	Cnot6	100	94.794	Mus_musculus
ENSMICG00000013018	-	100	94.794	MGP_PahariEiJ_G0017413	Cnot6	100	94.794	Mus_pahari
ENSMICG00000013018	-	100	94.434	MGP_SPRETEiJ_G0017122	Cnot6	100	94.434	Mus_spretus
ENSMICG00000013018	-	100	96.409	ENSMPUG00000000587	CNOT6	96	96.409	Mustela_putorius_furo
ENSMICG00000013018	-	100	93.772	ENSMLUG00000010257	CNOT6	100	93.772	Myotis_lucifugus
ENSMICG00000013018	-	100	93.716	ENSNGAG00000008269	Cnot6	100	93.716	Nannospalax_galili
ENSMICG00000013018	-	100	83.721	ENSNBRG00000010798	cnot6b	100	84.615	Neolamprologus_brichardi
ENSMICG00000013018	-	100	94.794	ENSNLEG00000002322	CNOT6	100	94.794	Nomascus_leucogenys
ENSMICG00000013018	-	83	95.794	ENSMEUG00000000025	CNOT6	81	95.794	Notamacropus_eugenii
ENSMICG00000013018	-	88	94.033	ENSOPRG00000008244	-	88	94.033	Ochotona_princeps
ENSMICG00000013018	-	100	93.537	ENSODEG00000007041	CNOT6	100	93.537	Octodon_degus
ENSMICG00000013018	-	75	83.688	ENSONIG00000013027	cnot6b	99	83.688	Oreochromis_niloticus
ENSMICG00000013018	-	100	93.357	ENSOANG00000010226	CNOT6	100	93.357	Ornithorhynchus_anatinus
ENSMICG00000013018	-	100	95.170	ENSOCUG00000011083	CNOT6	100	95.170	Oryctolagus_cuniculus
ENSMICG00000013018	-	100	83.900	ENSORLG00000005059	cnot6b	100	83.900	Oryzias_latipes
ENSMICG00000013018	-	100	83.900	ENSORLG00020012784	cnot6b	100	83.900	Oryzias_latipes_hni
ENSMICG00000013018	-	93	82.983	ENSORLG00015022658	cnot6b	98	82.983	Oryzias_latipes_hsok
ENSMICG00000013018	-	100	84.079	ENSOMEG00000005295	cnot6b	100	84.079	Oryzias_melastigma
ENSMICG00000013018	-	94	95.992	ENSOGAG00000032470	CNOT6	100	95.992	Otolemur_garnettii
ENSMICG00000013018	-	97	95.203	ENSOARG00000001003	CNOT6	100	95.203	Ovis_aries
ENSMICG00000013018	-	100	96.050	ENSPPAG00000032253	CNOT6	100	96.050	Pan_paniscus
ENSMICG00000013018	-	100	96.589	ENSPPRG00000011912	CNOT6	100	96.589	Panthera_pardus
ENSMICG00000013018	-	100	96.589	ENSPTIG00000016794	CNOT6	100	96.589	Panthera_tigris_altaica
ENSMICG00000013018	-	100	96.050	ENSPTRG00000017636	CNOT6	100	96.050	Pan_troglodytes
ENSMICG00000013018	-	100	96.050	ENSPANG00000016191	CNOT6	100	96.050	Papio_anubis
ENSMICG00000013018	-	100	85.663	ENSPKIG00000021368	cnot6b	100	85.663	Paramormyrops_kingsleyae
ENSMICG00000013018	-	98	94.118	ENSPSIG00000017307	CNOT6	100	94.118	Pelodiscus_sinensis
ENSMICG00000013018	-	100	83.721	ENSPMGG00000011238	cnot6b	100	83.721	Periophthalmus_magnuspinnatus
ENSMICG00000013018	-	100	93.716	ENSPEMG00000000627	Cnot6	100	93.716	Peromyscus_maniculatus_bairdii
ENSMICG00000013018	-	100	94.075	ENSPCIG00000020319	CNOT6	99	94.075	Phascolarctos_cinereus
ENSMICG00000013018	-	100	84.229	ENSPFOG00000006291	cnot6b	100	84.229	Poecilia_formosa
ENSMICG00000013018	-	100	80.287	ENSPLAG00000008266	cnot6b	100	80.287	Poecilia_latipinna
ENSMICG00000013018	-	100	84.050	ENSPMEG00000009091	cnot6b	100	84.050	Poecilia_mexicana
ENSMICG00000013018	-	100	82.796	ENSPREG00000003713	cnot6b	100	82.796	Poecilia_reticulata
ENSMICG00000013018	-	100	96.050	ENSPPYG00000016137	CNOT6	100	96.050	Pongo_abelii
ENSMICG00000013018	-	72	95.865	ENSPCAG00000005599	-	71	95.865	Procavia_capensis
ENSMICG00000013018	-	100	90.485	ENSPCOG00000017359	CNOT6	100	91.203	Propithecus_coquereli
ENSMICG00000013018	-	100	90.844	ENSPVAG00000003069	CNOT6	100	90.844	Pteropus_vampyrus
ENSMICG00000013018	-	100	83.542	ENSPNYG00000000321	cnot6b	100	84.436	Pundamilia_nyererei
ENSMICG00000013018	-	100	84.946	ENSPNAG00000029586	cnot6a	100	84.946	Pygocentrus_nattereri
ENSMICG00000013018	-	100	83.871	ENSPNAG00000028816	cnot6b	100	83.871	Pygocentrus_nattereri
ENSMICG00000013018	-	100	93.716	ENSRNOG00000054891	Cnot6	100	93.716	Rattus_norvegicus
ENSMICG00000013018	-	100	96.050	ENSRBIG00000004309	CNOT6	100	96.050	Rhinopithecus_bieti
ENSMICG00000013018	-	100	96.050	ENSRROG00000035378	CNOT6	100	96.050	Rhinopithecus_roxellana
ENSMICG00000013018	-	100	96.230	ENSSBOG00000030494	CNOT6	100	96.230	Saimiri_boliviensis_boliviensis
ENSMICG00000013018	-	100	94.075	ENSSHAG00000017436	CNOT6	100	94.075	Sarcophilus_harrisii
ENSMICG00000013018	-	100	86.380	ENSSFOG00015015133	CNOT6	100	86.380	Scleropages_formosus
ENSMICG00000013018	-	100	84.588	ENSSFOG00015022383	cnot6a	96	84.588	Scleropages_formosus
ENSMICG00000013018	-	100	83.184	ENSSMAG00000003084	cnot6b	100	83.184	Scophthalmus_maximus
ENSMICG00000013018	-	100	84.615	ENSSDUG00000004151	cnot6b	100	84.615	Seriola_dumerili
ENSMICG00000013018	-	100	83.900	ENSSLDG00000004448	cnot6b	100	84.794	Seriola_lalandi_dorsalis
ENSMICG00000013018	-	64	73.743	ENSSARG00000012650	-	100	73.743	Sorex_araneus
ENSMICG00000013018	-	100	93.357	ENSSPUG00000007893	CNOT6	100	93.357	Sphenodon_punctatus
ENSMICG00000013018	-	100	85.152	ENSSPAG00000000149	cnot6b	100	85.152	Stegastes_partitus
ENSMICG00000013018	-	100	95.691	ENSSSCG00000014009	CNOT6	100	95.691	Sus_scrofa
ENSMICG00000013018	-	100	93.896	ENSTGUG00000001119	CNOT6	100	93.896	Taeniopygia_guttata
ENSMICG00000013018	-	100	82.226	ENSTRUG00000002818	cnot6b	100	82.226	Takifugu_rubripes
ENSMICG00000013018	-	100	82.585	ENSTNIG00000004443	cnot6b	99	82.585	Tetraodon_nigroviridis
ENSMICG00000013018	-	87	65.503	ENSTBEG00000017094	-	100	65.503	Tupaia_belangeri
ENSMICG00000013018	-	100	95.871	ENSTTRG00000009363	CNOT6	100	95.871	Tursiops_truncatus
ENSMICG00000013018	-	77	95.571	ENSUAMG00000004579	CNOT6	88	95.571	Ursus_americanus
ENSMICG00000013018	-	100	91.952	ENSUMAG00000024577	CNOT6	100	91.952	Ursus_maritimus
ENSMICG00000013018	-	83	94.595	ENSVPAG00000003593	CNOT6	83	94.595	Vicugna_pacos
ENSMICG00000013018	-	100	96.589	ENSVVUG00000026940	CNOT6	100	96.589	Vulpes_vulpes
ENSMICG00000013018	-	100	80.645	ENSXCOG00000003360	cnot6b	100	80.645	Xiphophorus_couchianus
ENSMICG00000013018	-	100	84.050	ENSXMAG00000008730	cnot6b	100	84.050	Xiphophorus_maculatus