EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000013703 (Gene tree)
Gene ID: 105878638
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 29288 bases
Position: chr5:4545288-4574575
Accession: 105878638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000012517	CPSF_A	PF03178.15	6e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000013720	DDB1-201	4333	XM_012778320	ENSMICP00000012517	1140 (aa)	XP_012633774	UPI00063F7DCC

Gene Model

Click here to download ENSMICG00000013703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000013703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000013703	DDB1	100	99.825	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSMICG00000013703	DDB1	98	91.554	ENSAPOG00000005036	ddb1	99	91.633	Acanthochromis_polyacanthus
ENSMICG00000013703	DDB1	100	99.912	ENSAMEG00000016518	DDB1	100	99.912	Ailuropoda_melanoleuca
ENSMICG00000013703	DDB1	86	91.939	ENSACIG00000020624	ddb1	99	91.939	Amphilophus_citrinellus
ENSMICG00000013703	DDB1	100	91.228	ENSAOCG00000003066	ddb1	100	91.228	Amphiprion_ocellaris
ENSMICG00000013703	DDB1	100	91.316	ENSAPEG00000000092	ddb1	100	91.316	Amphiprion_percula
ENSMICG00000013703	DDB1	94	91.814	ENSATEG00000020571	ddb1	97	91.814	Anabas_testudineus
ENSMICG00000013703	DDB1	98	96.444	ENSAPLG00000007174	DDB1	99	96.444	Anas_platyrhynchos
ENSMICG00000013703	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSMICG00000013703	DDB1	100	99.825	ENSANAG00000021878	DDB1	100	99.825	Aotus_nancymaae
ENSMICG00000013703	DDB1	100	91.579	ENSACLG00000012401	ddb1	100	91.579	Astatotilapia_calliptera
ENSMICG00000013703	DDB1	100	99.737	ENSBTAG00000021569	DDB1	93	99.737	Bos_taurus
ENSMICG00000013703	DDB1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSMICG00000013703	DDB1	100	99.825	ENSCJAG00000019319	DDB1	100	99.825	Callithrix_jacchus
ENSMICG00000013703	DDB1	100	99.912	ENSCAFG00000016264	DDB1	100	99.912	Canis_familiaris
ENSMICG00000013703	DDB1	94	99.628	ENSCAFG00020012722	DDB1	99	99.628	Canis_lupus_dingo
ENSMICG00000013703	DDB1	100	99.737	ENSCHIG00000014969	DDB1	100	99.737	Capra_hircus
ENSMICG00000013703	DDB1	100	99.123	ENSTSYG00000008027	DDB1	100	99.123	Carlito_syrichta
ENSMICG00000013703	DDB1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
ENSMICG00000013703	DDB1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
ENSMICG00000013703	DDB1	100	99.825	ENSCCAG00000035883	DDB1	100	99.825	Cebus_capucinus
ENSMICG00000013703	DDB1	100	97.309	ENSCATG00000044495	DDB1	100	97.309	Cercocebus_atys
ENSMICG00000013703	DDB1	100	99.211	ENSCLAG00000004126	DDB1	100	99.211	Chinchilla_lanigera
ENSMICG00000013703	DDB1	100	99.825	ENSCSAG00000006392	DDB1	100	99.825	Chlorocebus_sabaeus
ENSMICG00000013703	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSMICG00000013703	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSMICG00000013703	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSMICG00000013703	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSMICG00000013703	DDB1	100	99.825	ENSCANG00000019948	DDB1	100	99.825	Colobus_angolensis_palliatus
ENSMICG00000013703	DDB1	100	99.825	ENSCGRG00001016599	Ddb1	100	99.825	Cricetulus_griseus_chok1gshd
ENSMICG00000013703	DDB1	100	99.825	ENSCGRG00000013427	Ddb1	100	99.825	Cricetulus_griseus_crigri
ENSMICG00000013703	DDB1	93	91.329	ENSCSEG00000012499	ddb1	99	89.777	Cynoglossus_semilaevis
ENSMICG00000013703	DDB1	94	91.519	ENSCVAG00000019531	ddb1	99	91.519	Cyprinodon_variegatus
ENSMICG00000013703	DDB1	100	88.441	ENSDARG00000074431	ddb1	100	88.559	Danio_rerio
ENSMICG00000013703	DDB1	94	99.256	ENSDNOG00000014884	DDB1	97	99.256	Dasypus_novemcinctus
ENSMICG00000013703	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSMICG00000013703	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSMICG00000013703	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSMICG00000013703	DDB1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSMICG00000013703	DDB1	100	99.737	ENSEASG00005008184	DDB1	100	99.737	Equus_asinus_asinus
ENSMICG00000013703	DDB1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
ENSMICG00000013703	DDB1	85	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSMICG00000013703	DDB1	100	91.316	ENSELUG00000023868	ddb1	100	91.316	Esox_lucius
ENSMICG00000013703	DDB1	100	99.912	ENSFCAG00000029716	DDB1	100	99.912	Felis_catus
ENSMICG00000013703	DDB1	100	96.850	ENSFALG00000011981	DDB1	100	96.850	Ficedula_albicollis
ENSMICG00000013703	DDB1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
ENSMICG00000013703	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.802	Fundulus_heteroclitus
ENSMICG00000013703	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSMICG00000013703	DDB1	100	97.018	ENSGALG00000042333	DDB1	100	97.018	Gallus_gallus
ENSMICG00000013703	DDB1	94	91.333	ENSGAFG00000013142	ddb1	99	91.333	Gambusia_affinis
ENSMICG00000013703	DDB1	96	90.742	ENSGACG00000017182	ddb1	100	90.742	Gasterosteus_aculeatus
ENSMICG00000013703	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSMICG00000013703	DDB1	100	99.825	ENSGGOG00000004052	DDB1	100	99.825	Gorilla_gorilla
ENSMICG00000013703	DDB1	100	91.579	ENSHBUG00000008873	ddb1	100	91.579	Haplochromis_burtoni
ENSMICG00000013703	DDB1	100	99.035	ENSHGLG00000018430	DDB1	100	99.035	Heterocephalus_glaber_female
ENSMICG00000013703	DDB1	100	98.070	ENSHGLG00100014475	DDB1	100	98.070	Heterocephalus_glaber_male
ENSMICG00000013703	DDB1	94	91.078	ENSHCOG00000018670	ddb1	98	91.078	Hippocampus_comes
ENSMICG00000013703	DDB1	100	90.614	ENSIPUG00000005612	DDB1	100	90.614	Ictalurus_punctatus
ENSMICG00000013703	DDB1	100	99.825	ENSSTOG00000007552	DDB1	100	99.825	Ictidomys_tridecemlineatus
ENSMICG00000013703	DDB1	100	99.649	ENSJJAG00000017769	Ddb1	100	99.649	Jaculus_jaculus
ENSMICG00000013703	DDB1	94	91.426	ENSKMAG00000002315	ddb1	99	91.426	Kryptolebias_marmoratus
ENSMICG00000013703	DDB1	85	91.606	ENSLBEG00000017065	ddb1	99	91.606	Labrus_bergylta
ENSMICG00000013703	DDB1	100	93.695	ENSLACG00000017611	DDB1	100	93.695	Latimeria_chalumnae
ENSMICG00000013703	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSMICG00000013703	DDB1	100	99.649	ENSLAFG00000011513	DDB1	100	99.649	Loxodonta_africana
ENSMICG00000013703	DDB1	100	99.825	ENSMFAG00000042035	DDB1	100	99.825	Macaca_fascicularis
ENSMICG00000013703	DDB1	99	99.823	ENSMMUG00000002691	DDB1	99	99.823	Macaca_mulatta
ENSMICG00000013703	DDB1	100	99.825	ENSMNEG00000031559	DDB1	100	99.825	Macaca_nemestrina
ENSMICG00000013703	DDB1	100	99.825	ENSMLEG00000044136	DDB1	100	99.825	Mandrillus_leucophaeus
ENSMICG00000013703	DDB1	100	91.579	ENSMAMG00000014372	ddb1	100	91.579	Mastacembelus_armatus
ENSMICG00000013703	DDB1	100	91.491	ENSMZEG00005013835	ddb1	100	91.491	Maylandia_zebra
ENSMICG00000013703	DDB1	94	96.369	ENSMGAG00000004990	DDB1	100	96.369	Meleagris_gallopavo
ENSMICG00000013703	DDB1	100	99.825	ENSMAUG00000012926	Ddb1	100	99.825	Mesocricetus_auratus
ENSMICG00000013703	DDB1	100	99.561	ENSMOCG00000020499	Ddb1	100	99.561	Microtus_ochrogaster
ENSMICG00000013703	DDB1	86	91.939	ENSMMOG00000001758	ddb1	99	91.939	Mola_mola
ENSMICG00000013703	DDB1	100	89.187	ENSMODG00000020353	DDB1	100	89.187	Monodelphis_domestica
ENSMICG00000013703	DDB1	100	91.579	ENSMALG00000014071	ddb1	100	91.579	Monopterus_albus
ENSMICG00000013703	DDB1	100	99.737	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.737	Mus_caroli
ENSMICG00000013703	DDB1	100	99.649	ENSMUSG00000024740	Ddb1	100	99.649	Mus_musculus
ENSMICG00000013703	DDB1	100	99.737	MGP_PahariEiJ_G0014189	Ddb1	100	99.737	Mus_pahari
ENSMICG00000013703	DDB1	100	99.737	MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	Mus_spretus
ENSMICG00000013703	DDB1	100	96.579	ENSMPUG00000014200	DDB1	100	96.579	Mustela_putorius_furo
ENSMICG00000013703	DDB1	100	99.298	ENSMLUG00000013232	DDB1	100	99.298	Myotis_lucifugus
ENSMICG00000013703	DDB1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
ENSMICG00000013703	DDB1	100	91.667	ENSNBRG00000019581	ddb1	100	91.667	Neolamprologus_brichardi
ENSMICG00000013703	DDB1	100	96.701	ENSNLEG00000002022	DDB1	100	96.701	Nomascus_leucogenys
ENSMICG00000013703	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSMICG00000013703	DDB1	90	90.980	ENSOPRG00000008254	DDB1	90	90.980	Ochotona_princeps
ENSMICG00000013703	DDB1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
ENSMICG00000013703	DDB1	100	91.579	ENSONIG00000005804	ddb1	100	91.579	Oreochromis_niloticus
ENSMICG00000013703	DDB1	91	98.159	ENSOANG00000004897	DDB1	100	98.159	Ornithorhynchus_anatinus
ENSMICG00000013703	DDB1	100	99.825	ENSOCUG00000001667	DDB1	100	99.825	Oryctolagus_cuniculus
ENSMICG00000013703	DDB1	96	90.009	ENSORLG00000001399	ddb1	98	91.258	Oryzias_latipes
ENSMICG00000013703	DDB1	96	89.918	ENSORLG00020001277	ddb1	97	89.918	Oryzias_latipes_hni
ENSMICG00000013703	DDB1	94	91.070	ENSORLG00015002080	ddb1	99	91.070	Oryzias_latipes_hsok
ENSMICG00000013703	DDB1	96	89.881	ENSOMEG00000006181	ddb1	99	89.881	Oryzias_melastigma
ENSMICG00000013703	DDB1	100	99.825	ENSOGAG00000016103	DDB1	100	99.825	Otolemur_garnettii
ENSMICG00000013703	DDB1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSMICG00000013703	DDB1	100	99.825	ENSPPAG00000035343	DDB1	100	99.825	Pan_paniscus
ENSMICG00000013703	DDB1	100	99.912	ENSPPRG00000013300	DDB1	100	99.912	Panthera_pardus
ENSMICG00000013703	DDB1	98	99.911	ENSPTIG00000006909	DDB1	98	99.911	Panthera_tigris_altaica
ENSMICG00000013703	DDB1	100	99.825	ENSPTRG00000003737	DDB1	100	99.825	Pan_troglodytes
ENSMICG00000013703	DDB1	100	99.825	ENSPANG00000000242	DDB1	100	99.825	Papio_anubis
ENSMICG00000013703	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSMICG00000013703	DDB1	98	96.975	ENSPSIG00000013275	DDB1	100	96.975	Pelodiscus_sinensis
ENSMICG00000013703	DDB1	86	91.633	ENSPMGG00000021179	ddb1	99	91.633	Periophthalmus_magnuspinnatus
ENSMICG00000013703	DDB1	100	99.825	ENSPEMG00000012241	Ddb1	100	99.825	Peromyscus_maniculatus_bairdii
ENSMICG00000013703	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSMICG00000013703	DDB1	100	98.947	ENSPCIG00000002643	DDB1	100	98.947	Phascolarctos_cinereus
ENSMICG00000013703	DDB1	100	90.973	ENSPFOG00000002768	ddb1	100	90.973	Poecilia_formosa
ENSMICG00000013703	DDB1	100	90.789	ENSPLAG00000017227	ddb1	100	90.789	Poecilia_latipinna
ENSMICG00000013703	DDB1	100	90.789	ENSPMEG00000011398	ddb1	100	90.789	Poecilia_mexicana
ENSMICG00000013703	DDB1	94	91.442	ENSPREG00000004440	ddb1	98	91.442	Poecilia_reticulata
ENSMICG00000013703	DDB1	100	94.852	ENSPPYG00000003193	DDB1	100	94.852	Pongo_abelii
ENSMICG00000013703	DDB1	85	99.552	ENSPCAG00000011040	DDB1	85	99.552	Procavia_capensis
ENSMICG00000013703	DDB1	100	98.424	ENSPCOG00000015176	DDB1	100	98.424	Propithecus_coquereli
ENSMICG00000013703	DDB1	100	99.737	ENSPVAG00000003847	DDB1	100	99.737	Pteropus_vampyrus
ENSMICG00000013703	DDB1	94	91.426	ENSPNAG00000006635	ddb1	97	91.426	Pygocentrus_nattereri
ENSMICG00000013703	DDB1	100	99.737	ENSRNOG00000020715	Ddb1	100	99.737	Rattus_norvegicus
ENSMICG00000013703	DDB1	100	99.825	ENSRBIG00000033611	DDB1	100	99.825	Rhinopithecus_bieti
ENSMICG00000013703	DDB1	100	99.825	ENSRROG00000041407	DDB1	100	99.825	Rhinopithecus_roxellana
ENSMICG00000013703	DDB1	100	99.737	ENSSBOG00000019775	DDB1	100	99.737	Saimiri_boliviensis_boliviensis
ENSMICG00000013703	DDB1	94	96.916	ENSSHAG00000011600	DDB1	100	96.916	Sarcophilus_harrisii
ENSMICG00000013703	DDB1	94	91.543	ENSSFOG00015011151	ddb1	97	91.543	Scleropages_formosus
ENSMICG00000013703	DDB1	100	91.140	ENSSMAG00000009495	ddb1	100	91.140	Scophthalmus_maximus
ENSMICG00000013703	DDB1	100	91.491	ENSSDUG00000004642	ddb1	100	91.491	Seriola_dumerili
ENSMICG00000013703	DDB1	100	91.491	ENSSLDG00000015804	ddb1	100	91.491	Seriola_lalandi_dorsalis
ENSMICG00000013703	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSMICG00000013703	DDB1	100	97.807	ENSSPUG00000019338	DDB1	100	97.807	Sphenodon_punctatus
ENSMICG00000013703	DDB1	94	91.721	ENSSPAG00000009888	ddb1	99	91.721	Stegastes_partitus
ENSMICG00000013703	DDB1	100	98.860	ENSSSCG00000013094	DDB1	100	98.860	Sus_scrofa
ENSMICG00000013703	DDB1	100	97.018	ENSTGUG00000006414	DDB1	100	97.018	Taeniopygia_guttata
ENSMICG00000013703	DDB1	94	90.401	ENSTRUG00000016682	ddb1	98	90.401	Takifugu_rubripes
ENSMICG00000013703	DDB1	88	85.130	ENSTNIG00000009565	ddb1	99	85.130	Tetraodon_nigroviridis
ENSMICG00000013703	DDB1	92	94.778	ENSTTRG00000011055	DDB1	94	94.778	Tursiops_truncatus
ENSMICG00000013703	DDB1	94	99.628	ENSUAMG00000017793	DDB1	93	99.628	Ursus_americanus
ENSMICG00000013703	DDB1	94	99.628	ENSUMAG00000011788	DDB1	98	99.628	Ursus_maritimus
ENSMICG00000013703	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSMICG00000013703	DDB1	100	99.825	ENSVVUG00000004987	DDB1	100	99.825	Vulpes_vulpes
ENSMICG00000013703	DDB1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
ENSMICG00000013703	DDB1	86	91.429	ENSXCOG00000013956	ddb1	99	91.429	Xiphophorus_couchianus
ENSMICG00000013703	DDB1	94	91.333	ENSXMAG00000000022	ddb1	99	91.333	Xiphophorus_maculatus