EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000014056 (Gene tree)
Gene ID: 105858501
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 171563 bases
Position: chr7:3821900-3993462
Accession: 105858501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000033491	Ago_hook	PF10427.9	2.5e-20	1	1
ENSMICP00000037533	Ago_hook	PF10427.9	1.5e-19	1	1
ENSMICP00000027999	Ago_hook	PF10427.9	1.5e-19	1	1
ENSMICP00000047911	Ago_hook	PF10427.9	1.5e-19	1	1
ENSMICP00000044959	Ago_hook	PF10427.9	1.6e-19	1	1
ENSMICP00000017898	Ago_hook	PF10427.9	2.4e-19	1	1
ENSMICP00000049127	Ago_hook	PF10427.9	2.5e-19	1	1
ENSMICP00000012824	Ago_hook	PF10427.9	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000047858	TNRC6B-202	5421	-	ENSMICP00000027999	1806 (aa)	-	UPI000C2EACFA
ENSMICT00000063846	TNRC6B-206	6911	XM_012741674	ENSMICP00000047911	1824 (aa)	XP_012597128	UPI00064300B6
ENSMICT00000039804	TNRC6B-208	5791	-	ENSMICP00000040271	432 (aa)	-	UPI000C2EBB20
ENSMICT00000062708	TNRC6B-204	8525	XM_012741673	ENSMICP00000044959	1836 (aa)	XP_012597127	UPI000642C91F
ENSMICT00000030745	TNRC6B-209	5268	-	ENSMICP00000017898	1755 (aa)	-	UPI000C2EA4A2
ENSMICT00000033667	TNRC6B-203	3432	-	ENSMICP00000037533	1143 (aa)	-	UPI000C2EC63D
ENSMICT00000065698	TNRC6B-207	5644	-	ENSMICP00000049127	1767 (aa)	-	UPI000C2EC27F
ENSMICT00000027267	TNRC6B-201	3099	XM_012741666	ENSMICP00000033491	1032 (aa)	XP_012597120	UPI00085B3690
ENSMICT00000014066	TNRC6B-205	5181	-	ENSMICP00000012824	1726 (aa)	-	UPI000C2ECC4F

Gene Model

Click here to download ENSMICG00000014056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000014056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000014056	TNRC6B	95	45.399	ENSMICG00000030685	TNRC6A	97	40.382
ENSMICG00000014056	TNRC6B	89	53.012	ENSMICG00000003952	TNRC6C	98	37.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000014056	TNRC6B	100	98.159	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSMICG00000014056	TNRC6B	100	97.149	ENSAMEG00000011025	TNRC6B	99	97.149	Ailuropoda_melanoleuca
ENSMICG00000014056	TNRC6B	98	87.962	ENSAPLG00000009347	TNRC6B	100	88.256	Anas_platyrhynchos
ENSMICG00000014056	TNRC6B	95	85.417	ENSACAG00000007281	TNRC6B	99	73.583	Anolis_carolinensis
ENSMICG00000014056	TNRC6B	100	98.146	ENSANAG00000035042	TNRC6B	100	98.146	Aotus_nancymaae
ENSMICG00000014056	TNRC6B	83	47.961	ENSAMXG00000008707	tnrc6b	82	46.968	Astyanax_mexicanus
ENSMICG00000014056	TNRC6B	100	96.072	ENSBTAG00000021076	TNRC6B	100	96.072	Bos_taurus
ENSMICG00000014056	TNRC6B	100	98.062	ENSCJAG00000002732	TNRC6B	100	99.155	Callithrix_jacchus
ENSMICG00000014056	TNRC6B	100	97.101	ENSCAFG00000001255	TNRC6B	100	97.336	Canis_familiaris
ENSMICG00000014056	TNRC6B	100	96.552	ENSCAFG00020002189	TNRC6B	99	95.703	Canis_lupus_dingo
ENSMICG00000014056	TNRC6B	100	95.986	ENSCHIG00000003491	TNRC6B	99	95.986	Capra_hircus
ENSMICG00000014056	TNRC6B	100	97.972	ENSTSYG00000011836	TNRC6B	100	97.972	Carlito_syrichta
ENSMICG00000014056	TNRC6B	100	96.669	ENSCPOG00000005705	TNRC6B	99	96.669	Cavia_porcellus
ENSMICG00000014056	TNRC6B	100	96.678	ENSCCAG00000019912	TNRC6B	100	96.678	Cebus_capucinus
ENSMICG00000014056	TNRC6B	100	97.278	ENSCATG00000029291	TNRC6B	100	97.278	Cercocebus_atys
ENSMICG00000014056	TNRC6B	100	96.778	ENSCLAG00000016942	TNRC6B	99	95.616	Chinchilla_lanigera
ENSMICG00000014056	TNRC6B	97	96.486	ENSCSAG00000006021	TNRC6B	99	92.764	Chlorocebus_sabaeus
ENSMICG00000014056	TNRC6B	61	98.168	ENSCHOG00000010004	-	62	98.168	Choloepus_hoffmanni
ENSMICG00000014056	TNRC6B	97	87.085	ENSCPBG00000022932	TNRC6B	99	86.964	Chrysemys_picta_bellii
ENSMICG00000014056	TNRC6B	100	97.626	ENSCANG00000030776	TNRC6B	100	97.626	Colobus_angolensis_palliatus
ENSMICG00000014056	TNRC6B	99	91.724	ENSCGRG00001020166	Tnrc6b	99	92.939	Cricetulus_griseus_chok1gshd
ENSMICG00000014056	TNRC6B	100	94.582	ENSCGRG00000016696	Tnrc6b	98	94.815	Cricetulus_griseus_crigri
ENSMICG00000014056	TNRC6B	100	97.326	ENSDNOG00000012744	TNRC6B	99	96.097	Dasypus_novemcinctus
ENSMICG00000014056	TNRC6B	100	96.718	ENSDORG00000003386	Tnrc6b	99	94.795	Dipodomys_ordii
ENSMICG00000014056	TNRC6B	99	87.879	ENSETEG00000006570	TNRC6B	99	88.112	Echinops_telfairi
ENSMICG00000014056	TNRC6B	100	96.833	ENSEASG00005005306	TNRC6B	99	96.467	Equus_asinus_asinus
ENSMICG00000014056	TNRC6B	100	97.479	ENSECAG00000009759	TNRC6B	100	98.500	Equus_caballus
ENSMICG00000014056	TNRC6B	75	96.703	ENSEEUG00000008690	-	62	96.703	Erinaceus_europaeus
ENSMICG00000014056	TNRC6B	52	63.576	ENSELUG00000019468	-	71	63.487	Esox_lucius
ENSMICG00000014056	TNRC6B	100	96.956	ENSFCAG00000004791	TNRC6B	100	96.904	Felis_catus
ENSMICG00000014056	TNRC6B	96	88.319	ENSFALG00000012195	TNRC6B	100	88.142	Ficedula_albicollis
ENSMICG00000014056	TNRC6B	100	97.059	ENSFDAG00000021368	TNRC6B	99	95.288	Fukomys_damarensis
ENSMICG00000014056	TNRC6B	99	89.202	ENSGALG00000012050	TNRC6B	99	86.107	Gallus_gallus
ENSMICG00000014056	TNRC6B	99	88.604	ENSGAGG00000025188	TNRC6B	98	88.550	Gopherus_agassizii
ENSMICG00000014056	TNRC6B	100	98.159	ENSGGOG00000008444	TNRC6B	100	98.159	Gorilla_gorilla
ENSMICG00000014056	TNRC6B	100	96.634	ENSHGLG00000009306	TNRC6B	100	96.634	Heterocephalus_glaber_female
ENSMICG00000014056	TNRC6B	100	96.718	ENSHGLG00100018108	TNRC6B	100	95.465	Heterocephalus_glaber_male
ENSMICG00000014056	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	94	46.232	Ictalurus_punctatus
ENSMICG00000014056	TNRC6B	100	96.774	ENSSTOG00000008927	TNRC6B	99	94.850	Ictidomys_tridecemlineatus
ENSMICG00000014056	TNRC6B	100	95.047	ENSJJAG00000015779	Tnrc6b	99	92.584	Jaculus_jaculus
ENSMICG00000014056	TNRC6B	96	78.146	ENSLACG00000000628	-	99	61.142	Latimeria_chalumnae
ENSMICG00000014056	TNRC6B	82	95.868	ENSLAFG00000014473	TNRC6B	100	96.170	Loxodonta_africana
ENSMICG00000014056	TNRC6B	100	97.278	ENSMFAG00000003862	TNRC6B	100	97.278	Macaca_fascicularis
ENSMICG00000014056	TNRC6B	100	97.967	ENSMMUG00000021345	TNRC6B	100	97.967	Macaca_mulatta
ENSMICG00000014056	TNRC6B	100	97.624	ENSMNEG00000042745	TNRC6B	100	97.901	Macaca_nemestrina
ENSMICG00000014056	TNRC6B	100	97.973	ENSMLEG00000041780	TNRC6B	100	97.973	Mandrillus_leucophaeus
ENSMICG00000014056	TNRC6B	99	88.859	ENSMGAG00000012333	TNRC6B	99	88.585	Meleagris_gallopavo
ENSMICG00000014056	TNRC6B	100	94.817	ENSMAUG00000016123	Tnrc6b	97	94.758	Mesocricetus_auratus
ENSMICG00000014056	TNRC6B	96	95.000	ENSMOCG00000020334	Tnrc6b	99	95.000	Microtus_ochrogaster
ENSMICG00000014056	TNRC6B	65	80.645	ENSMMOG00000002799	si:dkey-217f16.6	59	69.388	Mola_mola
ENSMICG00000014056	TNRC6B	100	95.165	MGP_CAROLIEiJ_G0020043	Tnrc6b	99	93.418	Mus_caroli
ENSMICG00000014056	TNRC6B	100	95.283	ENSMUSG00000047888	Tnrc6b	99	96.162	Mus_musculus
ENSMICG00000014056	TNRC6B	100	94.811	MGP_PahariEiJ_G0020045	Tnrc6b	99	93.027	Mus_pahari
ENSMICG00000014056	TNRC6B	100	95.893	MGP_SPRETEiJ_G0020941	Tnrc6b	98	95.863	Mus_spretus
ENSMICG00000014056	TNRC6B	97	98.473	ENSMPUG00000016442	TNRC6B	99	90.241	Mustela_putorius_furo
ENSMICG00000014056	TNRC6B	100	96.546	ENSMLUG00000008765	TNRC6B	99	96.567	Myotis_lucifugus
ENSMICG00000014056	TNRC6B	100	94.718	ENSNGAG00000021294	Tnrc6b	99	92.877	Nannospalax_galili
ENSMICG00000014056	TNRC6B	100	98.353	ENSNLEG00000015311	TNRC6B	100	98.353	Nomascus_leucogenys
ENSMICG00000014056	TNRC6B	99	91.289	ENSOPRG00000012054	TNRC6B	88	94.247	Ochotona_princeps
ENSMICG00000014056	TNRC6B	100	97.119	ENSODEG00000013146	TNRC6B	99	95.191	Octodon_degus
ENSMICG00000014056	TNRC6B	89	68.889	ENSONIG00000019679	-	99	41.636	Oreochromis_niloticus
ENSMICG00000014056	TNRC6B	100	96.809	ENSOCUG00000016128	TNRC6B	97	96.152	Oryctolagus_cuniculus
ENSMICG00000014056	TNRC6B	100	98.150	ENSOGAG00000011096	TNRC6B	100	98.150	Otolemur_garnettii
ENSMICG00000014056	TNRC6B	100	95.902	ENSOARG00000017238	TNRC6B	97	95.611	Ovis_aries
ENSMICG00000014056	TNRC6B	100	98.159	ENSPPAG00000028514	TNRC6B	100	98.159	Pan_paniscus
ENSMICG00000014056	TNRC6B	100	97.674	ENSPPRG00000017741	TNRC6B	100	97.674	Panthera_pardus
ENSMICG00000014056	TNRC6B	97	95.837	ENSPTIG00000022064	TNRC6B	98	93.326	Panthera_tigris_altaica
ENSMICG00000014056	TNRC6B	100	98.159	ENSPTRG00000047826	TNRC6B	100	98.159	Pan_troglodytes
ENSMICG00000014056	TNRC6B	98	92.417	ENSPANG00000009271	TNRC6B	98	97.368	Papio_anubis
ENSMICG00000014056	TNRC6B	99	88.424	ENSPSIG00000005318	TNRC6B	98	88.424	Pelodiscus_sinensis
ENSMICG00000014056	TNRC6B	100	94.595	ENSPEMG00000011403	Tnrc6b	99	93.043	Peromyscus_maniculatus_bairdii
ENSMICG00000014056	TNRC6B	99	87.610	ENSPCIG00000020347	TNRC6B	99	87.720	Phascolarctos_cinereus
ENSMICG00000014056	TNRC6B	93	56.667	ENSPFOG00000006033	-	96	40.289	Poecilia_formosa
ENSMICG00000014056	TNRC6B	87	69.863	ENSPLAG00000001418	-	98	50.071	Poecilia_latipinna
ENSMICG00000014056	TNRC6B	71	78.788	ENSPMEG00000006371	-	84	54.739	Poecilia_mexicana
ENSMICG00000014056	TNRC6B	100	97.914	ENSPPYG00000011849	TNRC6B	100	97.914	Pongo_abelii
ENSMICG00000014056	TNRC6B	95	87.121	ENSPCAG00000008739	TNRC6B	75	91.919	Procavia_capensis
ENSMICG00000014056	TNRC6B	100	99.594	ENSPCOG00000020790	TNRC6B	100	99.594	Propithecus_coquereli
ENSMICG00000014056	TNRC6B	96	95.084	ENSPVAG00000004975	TNRC6B	92	95.785	Pteropus_vampyrus
ENSMICG00000014056	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	80	42.496	Pygocentrus_nattereri
ENSMICG00000014056	TNRC6B	100	93.590	ENSRNOG00000024907	Tnrc6b	99	92.130	Rattus_norvegicus
ENSMICG00000014056	TNRC6B	100	97.626	ENSRBIG00000035576	TNRC6B	100	97.741	Rhinopithecus_bieti
ENSMICG00000014056	TNRC6B	100	97.677	ENSRROG00000031135	TNRC6B	100	97.677	Rhinopithecus_roxellana
ENSMICG00000014056	TNRC6B	99	98.192	ENSSBOG00000029743	TNRC6B	100	98.192	Saimiri_boliviensis_boliviensis
ENSMICG00000014056	TNRC6B	99	87.937	ENSSHAG00000009692	TNRC6B	99	87.828	Sarcophilus_harrisii
ENSMICG00000014056	TNRC6B	74	85.621	ENSSARG00000007971	-	70	90.909	Sorex_araneus
ENSMICG00000014056	TNRC6B	92	87.967	ENSSPUG00000010801	TNRC6B	99	90.528	Sphenodon_punctatus
ENSMICG00000014056	TNRC6B	100	96.812	ENSSSCG00000000078	TNRC6B	99	96.839	Sus_scrofa
ENSMICG00000014056	TNRC6B	93	87.617	ENSTGUG00000010138	-	99	87.368	Taeniopygia_guttata
ENSMICG00000014056	TNRC6B	99	94.149	ENSTTRG00000011465	TNRC6B	95	97.000	Tursiops_truncatus
ENSMICG00000014056	TNRC6B	99	96.846	ENSUAMG00000007174	TNRC6B	99	96.311	Ursus_americanus
ENSMICG00000014056	TNRC6B	100	97.170	ENSUMAG00000014336	TNRC6B	100	97.170	Ursus_maritimus
ENSMICG00000014056	TNRC6B	82	94.149	ENSVPAG00000001467	TNRC6B	72	90.778	Vicugna_pacos
ENSMICG00000014056	TNRC6B	100	97.297	ENSVVUG00000007064	TNRC6B	99	97.060	Vulpes_vulpes
ENSMICG00000014056	TNRC6B	58	55.649	ENSXETG00000006327	tnrc6b	98	60.000	Xenopus_tropicalis
ENSMICG00000014056	TNRC6B	72	50.512	ENSXCOG00000003042	-	98	39.200	Xiphophorus_couchianus