EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000014121 (Gene tree)
Gene ID: 105872950
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 35927 bases
Position: chrX:25185149-25221075
Accession: 105872950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000036572	RRM_1	PF00076.22	2.1e-25	1	1
ENSMICP00000048460	RRM_1	PF00076.22	2.2e-25	1	1
ENSMICP00000012879	RRM_1	PF00076.22	2.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000014125	CSTF2-203	1978	-	ENSMICP00000012879	621 (aa)	XP_012622843	UPI0006430D1E
ENSMICT00000034073	CSTF2-201	2008	XM_012767391	ENSMICP00000036572	572 (aa)	XP_012622845	UPI00064288F1
ENSMICT00000065727	CSTF2-202	2064	XM_012767390	ENSMICP00000048460	592 (aa)	XP_012622844	UPI00064367B4

Gene Model

Click here to download ENSMICG00000014121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000014121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000014121	CSTF2	99	71.475	ENSMICG00000000867	-	99	71.799
ENSMICG00000014121	CSTF2	99	63.994	ENSMICG00000030551	-	99	77.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000014121	CSTF2	100	96.817	ENSG00000101811	CSTF2	100	96.817	Homo_sapiens
ENSMICG00000014121	CSTF2	79	83.197	ENSAPOG00000005630	cstf2	97	61.386	Acanthochromis_polyacanthus
ENSMICG00000014121	CSTF2	100	94.536	ENSAMEG00000002082	CSTF2	100	94.536	Ailuropoda_melanoleuca
ENSMICG00000014121	CSTF2	87	82.645	ENSACIG00000012852	cstf2	97	75.000	Amphilophus_citrinellus
ENSMICG00000014121	CSTF2	81	78.682	ENSAOCG00000020905	cstf2	97	76.289	Amphiprion_ocellaris
ENSMICG00000014121	CSTF2	79	80.080	ENSAPEG00000006526	cstf2	97	76.370	Amphiprion_percula
ENSMICG00000014121	CSTF2	87	81.633	ENSATEG00000018186	cstf2	97	74.830	Anabas_testudineus
ENSMICG00000014121	CSTF2	97	80.308	ENSAPLG00000007255	CSTF2	98	80.000	Anas_platyrhynchos
ENSMICG00000014121	CSTF2	100	96.006	ENSANAG00000022342	CSTF2	100	96.006	Aotus_nancymaae
ENSMICG00000014121	CSTF2	62	83.058	ENSACLG00000000779	cstf2	93	77.193	Astatotilapia_calliptera
ENSMICG00000014121	CSTF2	73	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSMICG00000014121	CSTF2	100	93.706	ENSBTAG00000003547	CSTF2	100	93.706	Bos_taurus
ENSMICG00000014121	CSTF2	100	96.315	ENSCJAG00000004422	CSTF2	100	96.970	Callithrix_jacchus
ENSMICG00000014121	CSTF2	100	95.147	ENSCAFG00000017551	CSTF2	100	95.147	Canis_familiaris
ENSMICG00000014121	CSTF2	100	95.527	ENSCAFG00020007619	CSTF2	100	95.527	Canis_lupus_dingo
ENSMICG00000014121	CSTF2	100	94.056	ENSCHIG00000016994	CSTF2	100	94.056	Capra_hircus
ENSMICG00000014121	CSTF2	100	97.152	ENSTSYG00000006529	CSTF2	100	97.152	Carlito_syrichta
ENSMICG00000014121	CSTF2	100	95.142	ENSCPOG00000015255	CSTF2	100	95.142	Cavia_porcellus
ENSMICG00000014121	CSTF2	100	96.315	ENSCCAG00000032975	CSTF2	100	96.315	Cebus_capucinus
ENSMICG00000014121	CSTF2	100	96.482	ENSCATG00000022835	CSTF2	100	96.482	Cercocebus_atys
ENSMICG00000014121	CSTF2	100	95.645	ENSCLAG00000001904	CSTF2	100	95.645	Chinchilla_lanigera
ENSMICG00000014121	CSTF2	100	96.482	ENSCSAG00000010360	CSTF2	100	96.482	Chlorocebus_sabaeus
ENSMICG00000014121	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSMICG00000014121	CSTF2	100	77.449	ENSCPBG00000014293	CSTF2	100	77.196	Chrysemys_picta_bellii
ENSMICG00000014121	CSTF2	100	96.482	ENSCANG00000030612	CSTF2	100	96.482	Colobus_angolensis_palliatus
ENSMICG00000014121	CSTF2	100	92.586	ENSCGRG00001023023	Cstf2	100	92.586	Cricetulus_griseus_chok1gshd
ENSMICG00000014121	CSTF2	100	90.783	ENSCGRG00000003897	Cstf2	100	90.783	Cricetulus_griseus_crigri
ENSMICG00000014121	CSTF2	87	84.232	ENSCVAG00000005731	cstf2	96	62.544	Cyprinodon_variegatus
ENSMICG00000014121	CSTF2	74	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSMICG00000014121	CSTF2	100	93.206	ENSDORG00000007195	Cstf2	100	93.206	Dipodomys_ordii
ENSMICG00000014121	CSTF2	75	95.946	ENSETEG00000004931	CSTF2	68	95.946	Echinops_telfairi
ENSMICG00000014121	CSTF2	100	95.477	ENSEASG00005001216	CSTF2	100	95.477	Equus_asinus_asinus
ENSMICG00000014121	CSTF2	100	95.477	ENSECAG00000009325	CSTF2	100	95.477	Equus_caballus
ENSMICG00000014121	CSTF2	100	95.477	ENSFCAG00000007000	CSTF2	100	95.477	Felis_catus
ENSMICG00000014121	CSTF2	92	77.876	ENSFALG00000003859	CSTF2	100	78.230	Ficedula_albicollis
ENSMICG00000014121	CSTF2	100	96.326	ENSFDAG00000002416	CSTF2	100	96.326	Fukomys_damarensis
ENSMICG00000014121	CSTF2	87	82.988	ENSFHEG00000017065	cstf2	93	62.087	Fundulus_heteroclitus
ENSMICG00000014121	CSTF2	72	88.776	ENSGMOG00000005145	cstf2	99	57.465	Gadus_morhua
ENSMICG00000014121	CSTF2	100	80.551	ENSGALG00000006760	CSTF2	100	86.667	Gallus_gallus
ENSMICG00000014121	CSTF2	88	81.124	ENSGAFG00000020027	cstf2	96	76.727	Gambusia_affinis
ENSMICG00000014121	CSTF2	99	56.282	ENSGACG00000017326	cstf2	98	81.633	Gasterosteus_aculeatus
ENSMICG00000014121	CSTF2	100	79.426	ENSGAGG00000006037	CSTF2	100	80.223	Gopherus_agassizii
ENSMICG00000014121	CSTF2	100	96.817	ENSGGOG00000022267	CSTF2	100	96.817	Gorilla_gorilla
ENSMICG00000014121	CSTF2	62	82.645	ENSHBUG00000016183	cstf2	93	77.113	Haplochromis_burtoni
ENSMICG00000014121	CSTF2	100	82.692	ENSHGLG00000013455	-	100	82.692	Heterocephalus_glaber_female
ENSMICG00000014121	CSTF2	100	95.841	ENSHGLG00000000659	-	100	95.841	Heterocephalus_glaber_female
ENSMICG00000014121	CSTF2	100	82.867	ENSHGLG00100015391	-	100	82.867	Heterocephalus_glaber_male
ENSMICG00000014121	CSTF2	100	95.841	ENSHGLG00100001130	-	100	95.841	Heterocephalus_glaber_male
ENSMICG00000014121	CSTF2	80	82.787	ENSHCOG00000005157	cstf2	97	61.313	Hippocampus_comes
ENSMICG00000014121	CSTF2	100	68.304	ENSIPUG00000017839	cstf2	99	61.881	Ictalurus_punctatus
ENSMICG00000014121	CSTF2	100	95.147	ENSSTOG00000023445	CSTF2	100	95.147	Ictidomys_tridecemlineatus
ENSMICG00000014121	CSTF2	100	93.934	ENSJJAG00000020507	Cstf2	100	93.934	Jaculus_jaculus
ENSMICG00000014121	CSTF2	80	81.224	ENSKMAG00000001068	cstf2	96	61.189	Kryptolebias_marmoratus
ENSMICG00000014121	CSTF2	53	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSMICG00000014121	CSTF2	99	67.103	ENSLACG00000015927	CSTF2	99	69.016	Latimeria_chalumnae
ENSMICG00000014121	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	83	77.778	Lepisosteus_oculatus
ENSMICG00000014121	CSTF2	100	91.960	ENSLAFG00000000474	CSTF2	100	91.960	Loxodonta_africana
ENSMICG00000014121	CSTF2	100	96.482	ENSMFAG00000043888	CSTF2	100	96.482	Macaca_fascicularis
ENSMICG00000014121	CSTF2	100	96.965	ENSMMUG00000013008	CSTF2	100	96.965	Macaca_mulatta
ENSMICG00000014121	CSTF2	100	96.482	ENSMNEG00000041824	CSTF2	100	96.482	Macaca_nemestrina
ENSMICG00000014121	CSTF2	100	96.482	ENSMLEG00000036870	CSTF2	100	96.482	Mandrillus_leucophaeus
ENSMICG00000014121	CSTF2	82	80.687	ENSMAMG00000020364	cstf2	96	74.275	Mastacembelus_armatus
ENSMICG00000014121	CSTF2	62	83.058	ENSMZEG00005007200	cstf2	96	77.193	Maylandia_zebra
ENSMICG00000014121	CSTF2	93	70.134	ENSMGAG00000004139	CSTF2	100	86.454	Meleagris_gallopavo
ENSMICG00000014121	CSTF2	100	92.931	ENSMAUG00000000965	Cstf2	100	92.931	Mesocricetus_auratus
ENSMICG00000014121	CSTF2	100	92.174	ENSMOCG00000008081	Cstf2	100	92.174	Microtus_ochrogaster
ENSMICG00000014121	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	53.012	Mola_mola
ENSMICG00000014121	CSTF2	100	82.363	ENSMODG00000011785	CSTF2	100	83.527	Monodelphis_domestica
ENSMICG00000014121	CSTF2	100	93.164	MGP_CAROLIEiJ_G0033383	Cstf2	100	93.164	Mus_caroli
ENSMICG00000014121	CSTF2	100	92.759	ENSMUSG00000031256	Cstf2	100	92.759	Mus_musculus
ENSMICG00000014121	CSTF2	100	93.153	MGP_PahariEiJ_G0031923	Cstf2	100	93.312	Mus_pahari
ENSMICG00000014121	CSTF2	100	93.164	MGP_SPRETEiJ_G0034548	Cstf2	100	93.164	Mus_spretus
ENSMICG00000014121	CSTF2	100	94.453	ENSMPUG00000002339	CSTF2	100	94.453	Mustela_putorius_furo
ENSMICG00000014121	CSTF2	100	94.118	ENSMLUG00000004598	CSTF2	98	94.118	Myotis_lucifugus
ENSMICG00000014121	CSTF2	100	94.128	ENSNGAG00000021985	Cstf2	100	94.301	Nannospalax_galili
ENSMICG00000014121	CSTF2	93	63.184	ENSNBRG00000021694	cstf2	100	57.092	Neolamprologus_brichardi
ENSMICG00000014121	CSTF2	100	96.482	ENSNLEG00000007510	CSTF2	100	96.482	Nomascus_leucogenys
ENSMICG00000014121	CSTF2	100	83.916	ENSMEUG00000011186	-	100	85.490	Notamacropus_eugenii
ENSMICG00000014121	CSTF2	91	81.766	ENSMEUG00000014025	-	100	82.917	Notamacropus_eugenii
ENSMICG00000014121	CSTF2	100	79.196	ENSMEUG00000007875	-	100	80.769	Notamacropus_eugenii
ENSMICG00000014121	CSTF2	87	81.448	ENSOPRG00000003106	CSTF2	87	81.448	Ochotona_princeps
ENSMICG00000014121	CSTF2	100	94.627	ENSODEG00000002059	CSTF2	100	94.627	Octodon_degus
ENSMICG00000014121	CSTF2	99	58.491	ENSONIG00000002631	cstf2	99	59.561	Oreochromis_niloticus
ENSMICG00000014121	CSTF2	94	98.214	ENSOANG00000004208	CSTF2	87	91.429	Ornithorhynchus_anatinus
ENSMICG00000014121	CSTF2	100	94.974	ENSOCUG00000010468	CSTF2	100	94.974	Oryctolagus_cuniculus
ENSMICG00000014121	CSTF2	86	81.743	ENSORLG00000001380	cstf2	97	58.662	Oryzias_latipes
ENSMICG00000014121	CSTF2	86	82.158	ENSORLG00020021917	cstf2	97	58.834	Oryzias_latipes_hni
ENSMICG00000014121	CSTF2	86	81.743	ENSORLG00015011996	cstf2	97	58.662	Oryzias_latipes_hsok
ENSMICG00000014121	CSTF2	79	82.573	ENSOMEG00000015507	cstf2	97	74.074	Oryzias_melastigma
ENSMICG00000014121	CSTF2	100	94.913	ENSOGAG00000011192	CSTF2	100	94.754	Otolemur_garnettii
ENSMICG00000014121	CSTF2	100	94.056	ENSOARG00000001022	CSTF2	100	94.056	Ovis_aries
ENSMICG00000014121	CSTF2	100	96.817	ENSPPAG00000031804	CSTF2	100	96.817	Pan_paniscus
ENSMICG00000014121	CSTF2	100	95.645	ENSPPRG00000022492	CSTF2	100	95.645	Panthera_pardus
ENSMICG00000014121	CSTF2	100	95.310	ENSPTIG00000009922	CSTF2	100	95.310	Panthera_tigris_altaica
ENSMICG00000014121	CSTF2	100	96.817	ENSPTRG00000022090	CSTF2	100	96.817	Pan_troglodytes
ENSMICG00000014121	CSTF2	100	96.645	ENSPANG00000002303	CSTF2	100	96.645	Papio_anubis
ENSMICG00000014121	CSTF2	99	63.131	ENSPKIG00000005033	cstf2	93	65.345	Paramormyrops_kingsleyae
ENSMICG00000014121	CSTF2	87	83.402	ENSPMGG00000006534	cstf2	97	59.520	Periophthalmus_magnuspinnatus
ENSMICG00000014121	CSTF2	100	91.897	ENSPEMG00000019415	Cstf2	100	91.897	Peromyscus_maniculatus_bairdii
ENSMICG00000014121	CSTF2	100	83.609	ENSPCIG00000002989	CSTF2	100	84.106	Phascolarctos_cinereus
ENSMICG00000014121	CSTF2	84	77.206	ENSPLAG00000011176	cstf2	96	76.534	Poecilia_latipinna
ENSMICG00000014121	CSTF2	84	77.407	ENSPMEG00000017743	cstf2	96	77.091	Poecilia_mexicana
ENSMICG00000014121	CSTF2	94	63.281	ENSPREG00000011481	cstf2	97	61.379	Poecilia_reticulata
ENSMICG00000014121	CSTF2	100	96.650	ENSPPYG00000020541	CSTF2	100	96.650	Pongo_abelii
ENSMICG00000014121	CSTF2	100	98.311	ENSPCOG00000027744	CSTF2	100	98.311	Propithecus_coquereli
ENSMICG00000014121	CSTF2	97	79.892	ENSPVAG00000008342	CSTF2	100	79.892	Pteropus_vampyrus
ENSMICG00000014121	CSTF2	79	82.645	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSMICG00000014121	CSTF2	99	62.647	ENSPNAG00000018887	cstf2	97	62.982	Pygocentrus_nattereri
ENSMICG00000014121	CSTF2	100	93.391	ENSRNOG00000048025	Cstf2	100	93.391	Rattus_norvegicus
ENSMICG00000014121	CSTF2	100	94.801	ENSRBIG00000030745	CSTF2	100	94.801	Rhinopithecus_bieti
ENSMICG00000014121	CSTF2	100	96.482	ENSRROG00000045042	CSTF2	100	96.482	Rhinopithecus_roxellana
ENSMICG00000014121	CSTF2	100	96.166	ENSSBOG00000021649	CSTF2	100	96.166	Saimiri_boliviensis_boliviensis
ENSMICG00000014121	CSTF2	95	100.000	ENSSHAG00000003681	CSTF2	92	84.722	Sarcophilus_harrisii
ENSMICG00000014121	CSTF2	99	64.500	ENSSFOG00015006348	cstf2	98	64.500	Scleropages_formosus
ENSMICG00000014121	CSTF2	79	85.062	ENSSMAG00000013463	cstf2	97	59.354	Scophthalmus_maximus
ENSMICG00000014121	CSTF2	100	63.811	ENSSPUG00000005288	-	99	86.869	Sphenodon_punctatus
ENSMICG00000014121	CSTF2	100	95.439	ENSSSCG00000012486	CSTF2	100	95.439	Sus_scrofa
ENSMICG00000014121	CSTF2	100	79.932	ENSTGUG00000002253	CSTF2	100	80.272	Taeniopygia_guttata
ENSMICG00000014121	CSTF2	99	60.757	ENSTNIG00000016860	cstf2	99	60.616	Tetraodon_nigroviridis
ENSMICG00000014121	CSTF2	69	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSMICG00000014121	CSTF2	100	95.321	ENSTTRG00000013556	CSTF2	100	95.321	Tursiops_truncatus
ENSMICG00000014121	CSTF2	100	95.246	ENSUAMG00000026605	CSTF2	100	95.246	Ursus_americanus
ENSMICG00000014121	CSTF2	100	90.177	ENSUMAG00000012417	CSTF2	100	96.194	Ursus_maritimus
ENSMICG00000014121	CSTF2	73	94.169	ENSVPAG00000006466	CSTF2	72	94.169	Vicugna_pacos
ENSMICG00000014121	CSTF2	100	95.321	ENSVVUG00000004717	CSTF2	100	95.321	Vulpes_vulpes
ENSMICG00000014121	CSTF2	95	87.143	ENSXETG00000009642	cstf2	87	87.143	Xenopus_tropicalis
ENSMICG00000014121	CSTF2	82	75.610	ENSXCOG00000016436	cstf2	83	96.970	Xiphophorus_couchianus
ENSMICG00000014121	CSTF2	95	63.010	ENSXMAG00000013524	cstf2	96	76.408	Xiphophorus_maculatus