EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000015022 (Gene tree)
Gene ID: 105873706
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 15876 bases
Position: chr10:76987887-77003762
Accession: 105873706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024072	PRP4	PF08799.11	6.3e-14	1	1
ENSMICP00000013700	PRP4	PF08799.11	6.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000048296	PRPF4-201	2709	XM_012768888	ENSMICP00000024072	522 (aa)	XP_012624342	UPI000643C0EF
ENSMICT00000015025	PRPF4-202	1632	-	ENSMICP00000013700	543 (aa)	-	UPI00085B083B

Gene Model

Click here to download ENSMICG00000015022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000015022	PRPF4	56	31.677	ENSMICG00000002709	POC1A	81	31.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015022	PRPF4	100	98.467	ENSG00000136875	PRPF4	100	98.467	Homo_sapiens
ENSMICG00000015022	PRPF4	97	76.812	ENSAPOG00000014132	prpf4	99	76.812	Acanthochromis_polyacanthus
ENSMICG00000015022	PRPF4	100	98.467	ENSAMEG00000013048	PRPF4	100	97.753	Ailuropoda_melanoleuca
ENSMICG00000015022	PRPF4	97	76.621	ENSACIG00000005579	prpf4	99	76.621	Amphilophus_citrinellus
ENSMICG00000015022	PRPF4	97	76.275	ENSAOCG00000005457	prpf4	99	76.275	Amphiprion_ocellaris
ENSMICG00000015022	PRPF4	97	76.078	ENSAPEG00000000776	prpf4	99	76.078	Amphiprion_percula
ENSMICG00000015022	PRPF4	97	76.031	ENSATEG00000023013	prpf4	99	76.031	Anabas_testudineus
ENSMICG00000015022	PRPF4	98	90.253	ENSAPLG00000006534	PRPF4	99	88.158	Anas_platyrhynchos
ENSMICG00000015022	PRPF4	100	89.504	ENSACAG00000015110	PRPF4	100	89.504	Anolis_carolinensis
ENSMICG00000015022	PRPF4	100	98.659	ENSANAG00000022464	PRPF4	100	97.053	Aotus_nancymaae
ENSMICG00000015022	PRPF4	97	76.424	ENSACLG00000019031	prpf4	99	76.424	Astatotilapia_calliptera
ENSMICG00000015022	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSMICG00000015022	PRPF4	100	97.701	ENSBTAG00000004571	PRPF4	100	97.889	Bos_taurus
ENSMICG00000015022	PRPF4	90	44.304	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSMICG00000015022	PRPF4	100	98.851	ENSCJAG00000017856	PRPF4	100	98.851	Callithrix_jacchus
ENSMICG00000015022	PRPF4	100	98.467	ENSCAFG00000003224	PRPF4	99	97.940	Canis_familiaris
ENSMICG00000015022	PRPF4	100	98.467	ENSCAFG00020022637	PRPF4	100	98.656	Canis_lupus_dingo
ENSMICG00000015022	PRPF4	100	98.276	ENSCHIG00000024648	-	100	98.276	Capra_hircus
ENSMICG00000015022	PRPF4	100	98.276	ENSTSYG00000010366	PRPF4	100	98.464	Carlito_syrichta
ENSMICG00000015022	PRPF4	88	88.067	ENSCAPG00000008935	PRPF4	97	88.067	Cavia_aperea
ENSMICG00000015022	PRPF4	100	98.276	ENSCPOG00000010747	-	100	98.464	Cavia_porcellus
ENSMICG00000015022	PRPF4	100	91.762	ENSCPOG00000014729	-	100	91.762	Cavia_porcellus
ENSMICG00000015022	PRPF4	100	98.467	ENSCCAG00000028990	PRPF4	100	98.656	Cebus_capucinus
ENSMICG00000015022	PRPF4	100	98.467	ENSCATG00000021552	PRPF4	100	98.656	Cercocebus_atys
ENSMICG00000015022	PRPF4	100	98.467	ENSCLAG00000013448	PRPF4	100	98.656	Chinchilla_lanigera
ENSMICG00000015022	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSMICG00000015022	PRPF4	99	90.329	ENSCPBG00000019136	PRPF4	75	89.333	Chrysemys_picta_bellii
ENSMICG00000015022	PRPF4	96	58.858	ENSCING00000001299	-	97	58.218	Ciona_intestinalis
ENSMICG00000015022	PRPF4	96	57.738	ENSCSAVG00000009178	-	100	59.091	Ciona_savignyi
ENSMICG00000015022	PRPF4	100	98.467	ENSCANG00000003246	PRPF4	100	98.656	Colobus_angolensis_palliatus
ENSMICG00000015022	PRPF4	100	98.276	ENSCGRG00001016992	Prpf4	100	98.464	Cricetulus_griseus_chok1gshd
ENSMICG00000015022	PRPF4	100	98.276	ENSCGRG00000017560	Prpf4	100	98.464	Cricetulus_griseus_crigri
ENSMICG00000015022	PRPF4	97	75.740	ENSCSEG00000020451	prpf4	99	75.740	Cynoglossus_semilaevis
ENSMICG00000015022	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSMICG00000015022	PRPF4	100	97.510	ENSDNOG00000013203	PRPF4	100	98.084	Dasypus_novemcinctus
ENSMICG00000015022	PRPF4	100	98.276	ENSDORG00000026275	Prpf4	100	98.464	Dipodomys_ordii
ENSMICG00000015022	PRPF4	87	56.018	FBgn0036733	U4-U6-60K	99	50.000	Drosophila_melanogaster
ENSMICG00000015022	PRPF4	100	96.558	ENSETEG00000020389	PRPF4	100	96.558	Echinops_telfairi
ENSMICG00000015022	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSMICG00000015022	PRPF4	100	98.659	ENSEASG00005022678	PRPF4	100	98.848	Equus_asinus_asinus
ENSMICG00000015022	PRPF4	100	98.659	ENSECAG00000007072	PRPF4	100	98.848	Equus_caballus
ENSMICG00000015022	PRPF4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSMICG00000015022	PRPF4	97	80.990	ENSELUG00000007510	prpf4	99	80.990	Esox_lucius
ENSMICG00000015022	PRPF4	100	98.851	ENSFCAG00000005514	PRPF4	100	98.851	Felis_catus
ENSMICG00000015022	PRPF4	98	87.528	ENSFALG00000005423	PRPF4	90	85.591	Ficedula_albicollis
ENSMICG00000015022	PRPF4	100	98.659	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSMICG00000015022	PRPF4	97	75.639	ENSFHEG00000001300	prpf4	99	75.639	Fundulus_heteroclitus
ENSMICG00000015022	PRPF4	98	90.196	ENSGALG00000008857	PRPF4	96	89.669	Gallus_gallus
ENSMICG00000015022	PRPF4	65	70.882	ENSGAFG00000012164	prpf4	70	70.882	Gambusia_affinis
ENSMICG00000015022	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.627	Gasterosteus_aculeatus
ENSMICG00000015022	PRPF4	99	90.135	ENSGAGG00000025029	PRPF4	97	89.143	Gopherus_agassizii
ENSMICG00000015022	PRPF4	100	98.276	ENSGGOG00000006943	PRPF4	100	98.464	Gorilla_gorilla
ENSMICG00000015022	PRPF4	97	76.228	ENSHBUG00000000562	prpf4	99	76.228	Haplochromis_burtoni
ENSMICG00000015022	PRPF4	100	81.298	ENSHGLG00000016628	-	100	82.061	Heterocephalus_glaber_female
ENSMICG00000015022	PRPF4	100	79.885	ENSHGLG00000003838	-	100	80.038	Heterocephalus_glaber_female
ENSMICG00000015022	PRPF4	100	98.276	ENSHGLG00000015191	PRPF4	100	98.464	Heterocephalus_glaber_female
ENSMICG00000015022	PRPF4	100	79.885	ENSHGLG00100005571	-	100	80.038	Heterocephalus_glaber_male
ENSMICG00000015022	PRPF4	97	79.406	ENSIPUG00000017956	PRPF4	99	79.406	Ictalurus_punctatus
ENSMICG00000015022	PRPF4	100	98.276	ENSSTOG00000027833	PRPF4	100	98.464	Ictidomys_tridecemlineatus
ENSMICG00000015022	PRPF4	100	98.276	ENSJJAG00000008838	Prpf4	100	98.464	Jaculus_jaculus
ENSMICG00000015022	PRPF4	97	75.639	ENSKMAG00000013236	prpf4	99	75.639	Kryptolebias_marmoratus
ENSMICG00000015022	PRPF4	97	75.345	ENSLBEG00000020611	prpf4	99	75.345	Labrus_bergylta
ENSMICG00000015022	PRPF4	98	80.469	ENSLACG00000016317	PRPF4	98	80.469	Latimeria_chalumnae
ENSMICG00000015022	PRPF4	97	81.386	ENSLOCG00000000581	prpf4	99	81.386	Lepisosteus_oculatus
ENSMICG00000015022	PRPF4	100	97.510	ENSLAFG00000018225	PRPF4	100	97.893	Loxodonta_africana
ENSMICG00000015022	PRPF4	100	98.276	ENSMFAG00000039397	PRPF4	100	98.464	Macaca_fascicularis
ENSMICG00000015022	PRPF4	100	98.467	ENSMMUG00000005844	PRPF4	100	98.656	Macaca_mulatta
ENSMICG00000015022	PRPF4	100	87.165	ENSMNEG00000033737	PRPF4	100	88.100	Macaca_nemestrina
ENSMICG00000015022	PRPF4	100	98.467	ENSMLEG00000040284	PRPF4	100	98.656	Mandrillus_leucophaeus
ENSMICG00000015022	PRPF4	97	76.031	ENSMAMG00000020141	prpf4	99	76.031	Mastacembelus_armatus
ENSMICG00000015022	PRPF4	97	76.424	ENSMZEG00005023205	prpf4	99	76.424	Maylandia_zebra
ENSMICG00000015022	PRPF4	99	88.247	ENSMGAG00000001796	PRPF4	100	87.151	Meleagris_gallopavo
ENSMICG00000015022	PRPF4	100	98.084	ENSMAUG00000018022	Prpf4	100	98.273	Mesocricetus_auratus
ENSMICG00000015022	PRPF4	100	97.701	ENSMOCG00000018273	Prpf4	100	97.889	Microtus_ochrogaster
ENSMICG00000015022	PRPF4	97	74.951	ENSMMOG00000021177	prpf4	99	74.951	Mola_mola
ENSMICG00000015022	PRPF4	100	93.881	ENSMODG00000025096	-	99	92.551	Monodelphis_domestica
ENSMICG00000015022	PRPF4	100	93.893	ENSMODG00000004444	-	100	93.893	Monodelphis_domestica
ENSMICG00000015022	PRPF4	97	76.031	ENSMALG00000013624	prpf4	99	76.031	Monopterus_albus
ENSMICG00000015022	PRPF4	100	98.084	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.273	Mus_caroli
ENSMICG00000015022	PRPF4	100	98.084	ENSMUSG00000066148	Prpf4	100	98.273	Mus_musculus
ENSMICG00000015022	PRPF4	100	97.893	MGP_PahariEiJ_G0028413	Prpf4	100	98.081	Mus_pahari
ENSMICG00000015022	PRPF4	100	98.084	MGP_SPRETEiJ_G0027042	Prpf4	100	98.273	Mus_spretus
ENSMICG00000015022	PRPF4	100	98.467	ENSMPUG00000007883	PRPF4	100	98.656	Mustela_putorius_furo
ENSMICG00000015022	PRPF4	100	96.552	ENSMLUG00000008626	-	99	96.219	Myotis_lucifugus
ENSMICG00000015022	PRPF4	100	98.467	ENSMLUG00000015309	-	99	98.488	Myotis_lucifugus
ENSMICG00000015022	PRPF4	100	92.912	ENSNGAG00000000468	Prpf4	100	93.090	Nannospalax_galili
ENSMICG00000015022	PRPF4	97	76.621	ENSNBRG00000007972	prpf4	99	76.621	Neolamprologus_brichardi
ENSMICG00000015022	PRPF4	100	98.659	ENSNLEG00000016647	PRPF4	100	98.848	Nomascus_leucogenys
ENSMICG00000015022	PRPF4	98	94.892	ENSMEUG00000013256	PRPF4	99	94.892	Notamacropus_eugenii
ENSMICG00000015022	PRPF4	100	98.084	ENSOPRG00000005302	PRPF4	100	98.084	Ochotona_princeps
ENSMICG00000015022	PRPF4	100	98.659	ENSODEG00000018147	PRPF4	100	98.848	Octodon_degus
ENSMICG00000015022	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.424	Oreochromis_niloticus
ENSMICG00000015022	PRPF4	100	98.467	ENSOCUG00000005046	PRPF4	100	98.656	Oryctolagus_cuniculus
ENSMICG00000015022	PRPF4	97	74.359	ENSORLG00000019641	prpf4	99	74.359	Oryzias_latipes
ENSMICG00000015022	PRPF4	97	74.359	ENSORLG00020019438	prpf4	99	74.359	Oryzias_latipes_hni
ENSMICG00000015022	PRPF4	97	74.167	ENSOMEG00000020941	prpf4	99	74.167	Oryzias_melastigma
ENSMICG00000015022	PRPF4	100	93.870	ENSOGAG00000007802	PRPF4	100	92.884	Otolemur_garnettii
ENSMICG00000015022	PRPF4	100	98.084	ENSOARG00000006319	PRPF4	100	96.685	Ovis_aries
ENSMICG00000015022	PRPF4	100	98.276	ENSPPAG00000041797	PRPF4	100	98.464	Pan_paniscus
ENSMICG00000015022	PRPF4	100	98.659	ENSPPRG00000014360	PRPF4	100	98.848	Panthera_pardus
ENSMICG00000015022	PRPF4	100	98.659	ENSPTIG00000009574	PRPF4	100	98.848	Panthera_tigris_altaica
ENSMICG00000015022	PRPF4	100	98.467	ENSPTRG00000021274	PRPF4	100	98.467	Pan_troglodytes
ENSMICG00000015022	PRPF4	100	98.276	ENSPANG00000025776	PRPF4	100	97.790	Papio_anubis
ENSMICG00000015022	PRPF4	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSMICG00000015022	PRPF4	98	90.078	ENSPSIG00000010713	PRPF4	90	90.588	Pelodiscus_sinensis
ENSMICG00000015022	PRPF4	99	58.716	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSMICG00000015022	PRPF4	100	98.276	ENSPEMG00000024115	Prpf4	100	98.464	Peromyscus_maniculatus_bairdii
ENSMICG00000015022	PRPF4	98	94.892	ENSPCIG00000003821	PRPF4	99	94.892	Phascolarctos_cinereus
ENSMICG00000015022	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSMICG00000015022	PRPF4	84	69.822	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSMICG00000015022	PRPF4	91	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSMICG00000015022	PRPF4	98	98.249	ENSPCAG00000002561	PRPF4	100	98.249	Procavia_capensis
ENSMICG00000015022	PRPF4	100	98.851	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSMICG00000015022	PRPF4	100	95.019	ENSPVAG00000004708	PRPF4	100	95.019	Pteropus_vampyrus
ENSMICG00000015022	PRPF4	97	76.424	ENSPNYG00000008013	prpf4	99	76.424	Pundamilia_nyererei
ENSMICG00000015022	PRPF4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSMICG00000015022	PRPF4	100	97.893	ENSRNOG00000014777	Prpf4	100	98.081	Rattus_norvegicus
ENSMICG00000015022	PRPF4	100	98.467	ENSRBIG00000040221	PRPF4	100	98.656	Rhinopithecus_bieti
ENSMICG00000015022	PRPF4	100	98.467	ENSRROG00000040240	PRPF4	100	98.656	Rhinopithecus_roxellana
ENSMICG00000015022	PRPF4	100	94.466	ENSSHAG00000017658	PRPF4	100	94.466	Sarcophilus_harrisii
ENSMICG00000015022	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSMICG00000015022	PRPF4	97	75.049	ENSSMAG00000008889	prpf4	99	75.049	Scophthalmus_maximus
ENSMICG00000015022	PRPF4	97	72.978	ENSSDUG00000022083	prpf4	99	73.176	Seriola_dumerili
ENSMICG00000015022	PRPF4	97	73.176	ENSSLDG00000008115	prpf4	99	73.373	Seriola_lalandi_dorsalis
ENSMICG00000015022	PRPF4	100	90.230	ENSSPUG00000015582	PRPF4	100	90.230	Sphenodon_punctatus
ENSMICG00000015022	PRPF4	97	70.898	ENSSPAG00000011286	prpf4	99	70.898	Stegastes_partitus
ENSMICG00000015022	PRPF4	100	98.659	ENSSSCG00000024648	PRPF4	100	98.848	Sus_scrofa
ENSMICG00000015022	PRPF4	94	90.798	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSMICG00000015022	PRPF4	97	75.787	ENSTRUG00000008853	prpf4	99	75.787	Takifugu_rubripes
ENSMICG00000015022	PRPF4	97	75.148	ENSTNIG00000013250	prpf4	99	75.148	Tetraodon_nigroviridis
ENSMICG00000015022	PRPF4	100	90.421	ENSTBEG00000000821	PRPF4	100	90.421	Tupaia_belangeri
ENSMICG00000015022	PRPF4	82	98.658	ENSTTRG00000003246	PRPF4	85	98.658	Tursiops_truncatus
ENSMICG00000015022	PRPF4	64	95.224	ENSUAMG00000018288	PRPF4	90	95.509	Ursus_americanus
ENSMICG00000015022	PRPF4	100	97.701	ENSUMAG00000019375	PRPF4	100	97.889	Ursus_maritimus
ENSMICG00000015022	PRPF4	100	98.659	ENSVPAG00000005281	PRPF4	100	98.659	Vicugna_pacos
ENSMICG00000015022	PRPF4	100	97.338	ENSVVUG00000002476	PRPF4	100	97.633	Vulpes_vulpes
ENSMICG00000015022	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.113	Xiphophorus_couchianus
ENSMICG00000015022	PRPF4	87	64.410	ENSXMAG00000002750	prpf4	98	65.209	Xiphophorus_maculatus