EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000015280 (Gene tree)
Gene ID: 105856512
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 102211 bases
Position: chr17:48075035-48177245
Accession: 105856512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000013955	SpoU_methylase	PF00588.19	8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000015300	TARBP1-201	4653	XM_020281333	ENSMICP00000013955	1550 (aa)	XP_020136922	UPI000C2ED7C3

Gene Model

Click here to download ENSMICG00000015280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015280	TARBP1	99	79.827	ENSG00000059588	TARBP1	99	79.926	Homo_sapiens
ENSMICG00000015280	TARBP1	99	38.696	ENSAPOG00000016419	si:dkey-85a20.4	88	40.531	Acanthochromis_polyacanthus
ENSMICG00000015280	TARBP1	83	76.552	ENSAMEG00000003359	TARBP1	99	76.552	Ailuropoda_melanoleuca
ENSMICG00000015280	TARBP1	99	39.320	ENSATEG00000020266	si:dkey-85a20.4	88	41.116	Anabas_testudineus
ENSMICG00000015280	TARBP1	82	61.140	ENSAPLG00000007666	TARBP1	99	61.644	Anas_platyrhynchos
ENSMICG00000015280	TARBP1	97	54.000	ENSACAG00000001142	TARBP1	99	52.963	Anolis_carolinensis
ENSMICG00000015280	TARBP1	91	86.207	ENSANAG00000022031	TARBP1	99	73.486	Aotus_nancymaae
ENSMICG00000015280	TARBP1	99	75.750	ENSBTAG00000004517	TARBP1	99	76.075	Bos_taurus
ENSMICG00000015280	TARBP1	99	79.272	ENSCJAG00000018155	TARBP1	99	79.151	Callithrix_jacchus
ENSMICG00000015280	TARBP1	84	81.244	ENSCAFG00000011533	TARBP1	94	81.244	Canis_familiaris
ENSMICG00000015280	TARBP1	99	76.460	ENSCAFG00020027141	TARBP1	95	80.976	Canis_lupus_dingo
ENSMICG00000015280	TARBP1	99	74.430	ENSCHIG00000011437	TARBP1	99	75.123	Capra_hircus
ENSMICG00000015280	TARBP1	79	77.888	ENSTSYG00000010382	TARBP1	97	78.041	Carlito_syrichta
ENSMICG00000015280	TARBP1	77	63.936	ENSCAPG00000010831	TARBP1	99	63.936	Cavia_aperea
ENSMICG00000015280	TARBP1	99	69.603	ENSCPOG00000013995	TARBP1	99	70.025	Cavia_porcellus
ENSMICG00000015280	TARBP1	99	79.395	ENSCCAG00000037278	TARBP1	99	79.582	Cebus_capucinus
ENSMICG00000015280	TARBP1	99	79.482	ENSCATG00000011754	TARBP1	99	79.741	Cercocebus_atys
ENSMICG00000015280	TARBP1	82	77.500	ENSCLAG00000003655	TARBP1	99	77.500	Chinchilla_lanigera
ENSMICG00000015280	TARBP1	78	79.050	ENSCSAG00000010100	TARBP1	99	79.050	Chlorocebus_sabaeus
ENSMICG00000015280	TARBP1	93	59.262	ENSCPBG00000005587	TARBP1	99	58.797	Chrysemys_picta_bellii
ENSMICG00000015280	TARBP1	83	80.515	ENSCANG00000034343	TARBP1	99	80.515	Colobus_angolensis_palliatus
ENSMICG00000015280	TARBP1	99	68.506	ENSCGRG00001016690	Tarbp1	99	67.948	Cricetulus_griseus_chok1gshd
ENSMICG00000015280	TARBP1	99	69.121	ENSCGRG00000016893	Tarbp1	99	69.121	Cricetulus_griseus_crigri
ENSMICG00000015280	TARBP1	99	36.855	ENSCSEG00000005255	si:dkey-85a20.4	86	41.577	Cynoglossus_semilaevis
ENSMICG00000015280	TARBP1	84	41.126	ENSDARG00000079055	si:dkey-85a20.4	99	47.387	Danio_rerio
ENSMICG00000015280	TARBP1	99	75.440	ENSDNOG00000008637	TARBP1	99	74.955	Dasypus_novemcinctus
ENSMICG00000015280	TARBP1	79	66.256	ENSDORG00000007984	Tarbp1	100	66.256	Dipodomys_ordii
ENSMICG00000015280	TARBP1	99	78.990	ENSEASG00005000252	TARBP1	99	78.317	Equus_asinus_asinus
ENSMICG00000015280	TARBP1	99	78.879	ENSECAG00000023673	TARBP1	99	78.838	Equus_caballus
ENSMICG00000015280	TARBP1	98	38.121	ENSELUG00000012193	si:dkey-85a20.4	86	40.539	Esox_lucius
ENSMICG00000015280	TARBP1	99	75.741	ENSFCAG00000014183	TARBP1	99	75.431	Felis_catus
ENSMICG00000015280	TARBP1	79	61.103	ENSFALG00000013565	TARBP1	99	60.883	Ficedula_albicollis
ENSMICG00000015280	TARBP1	76	78.155	ENSFDAG00000001308	TARBP1	91	78.155	Fukomys_damarensis
ENSMICG00000015280	TARBP1	96	45.299	ENSFHEG00000007565	si:dkey-85a20.4	89	45.042	Fundulus_heteroclitus
ENSMICG00000015280	TARBP1	79	66.169	ENSGMOG00000004549	si:dkey-85a20.4	89	66.169	Gadus_morhua
ENSMICG00000015280	TARBP1	99	54.484	ENSGALG00000011000	TARBP1	99	55.735	Gallus_gallus
ENSMICG00000015280	TARBP1	99	37.740	ENSGAFG00000007387	si:dkey-85a20.4	85	40.634	Gambusia_affinis
ENSMICG00000015280	TARBP1	84	40.028	ENSGACG00000005865	si:dkey-85a20.4	99	40.028	Gasterosteus_aculeatus
ENSMICG00000015280	TARBP1	99	59.704	ENSGAGG00000012102	TARBP1	99	59.828	Gopherus_agassizii
ENSMICG00000015280	TARBP1	83	82.265	ENSGGOG00000022879	TARBP1	99	82.638	Gorilla_gorilla
ENSMICG00000015280	TARBP1	94	40.447	ENSHBUG00000008877	si:dkey-85a20.4	86	42.313	Haplochromis_burtoni
ENSMICG00000015280	TARBP1	99	70.581	ENSHGLG00000011592	TARBP1	99	70.988	Heterocephalus_glaber_female
ENSMICG00000015280	TARBP1	92	71.614	ENSHGLG00100015169	TARBP1	99	71.614	Heterocephalus_glaber_male
ENSMICG00000015280	TARBP1	96	64.481	ENSIPUG00000005249	si:dkey-85a20.4	76	64.481	Ictalurus_punctatus
ENSMICG00000015280	TARBP1	86	68.030	ENSSTOG00000032291	TARBP1	99	84.444	Ictidomys_tridecemlineatus
ENSMICG00000015280	TARBP1	95	66.836	ENSJJAG00000017840	Tarbp1	99	66.836	Jaculus_jaculus
ENSMICG00000015280	TARBP1	79	43.329	ENSKMAG00000017546	si:dkey-85a20.4	73	43.461	Kryptolebias_marmoratus
ENSMICG00000015280	TARBP1	64	46.559	ENSLBEG00000012132	si:dkey-85a20.4	74	46.559	Labrus_bergylta
ENSMICG00000015280	TARBP1	99	47.151	ENSLACG00000004337	TARBP1	99	46.755	Latimeria_chalumnae
ENSMICG00000015280	TARBP1	99	42.191	ENSLOCG00000016214	si:dkey-85a20.4	85	45.513	Lepisosteus_oculatus
ENSMICG00000015280	TARBP1	93	86.082	ENSLAFG00000011394	TARBP1	94	84.343	Loxodonta_africana
ENSMICG00000015280	TARBP1	99	80.273	ENSMFAG00000041068	TARBP1	99	80.533	Macaca_fascicularis
ENSMICG00000015280	TARBP1	99	80.222	ENSMMUG00000021703	TARBP1	99	80.333	Macaca_mulatta
ENSMICG00000015280	TARBP1	99	79.815	ENSMNEG00000045002	TARBP1	99	79.926	Macaca_nemestrina
ENSMICG00000015280	TARBP1	82	80.281	ENSMLEG00000044182	TARBP1	99	80.281	Mandrillus_leucophaeus
ENSMICG00000015280	TARBP1	99	39.048	ENSMAMG00000021760	si:dkey-85a20.4	89	40.840	Mastacembelus_armatus
ENSMICG00000015280	TARBP1	99	39.432	ENSMZEG00005005751	si:dkey-85a20.4	86	42.243	Maylandia_zebra
ENSMICG00000015280	TARBP1	99	67.162	ENSMAUG00000020968	Tarbp1	99	66.914	Mesocricetus_auratus
ENSMICG00000015280	TARBP1	99	66.996	ENSMOCG00000004128	Tarbp1	99	66.378	Microtus_ochrogaster
ENSMICG00000015280	TARBP1	98	37.782	ENSMMOG00000007795	si:dkey-85a20.4	88	38.966	Mola_mola
ENSMICG00000015280	TARBP1	99	64.940	ENSMODG00000008504	TARBP1	99	64.699	Monodelphis_domestica
ENSMICG00000015280	TARBP1	85	40.296	ENSMALG00000002916	si:dkey-85a20.4	88	40.597	Monopterus_albus
ENSMICG00000015280	TARBP1	99	65.716	MGP_CAROLIEiJ_G0031729	Tarbp1	99	65.261	Mus_caroli
ENSMICG00000015280	TARBP1	99	65.408	ENSMUSG00000090290	Tarbp1	99	65.201	Mus_musculus
ENSMICG00000015280	TARBP1	99	66.047	MGP_PahariEiJ_G0023326	Tarbp1	99	65.530	Mus_pahari
ENSMICG00000015280	TARBP1	99	66.048	MGP_SPRETEiJ_G0032846	Tarbp1	99	65.842	Mus_spretus
ENSMICG00000015280	TARBP1	73	83.744	ENSMPUG00000002802	TARBP1	93	83.744	Mustela_putorius_furo
ENSMICG00000015280	TARBP1	83	66.258	ENSMLUG00000002414	TARBP1	99	66.860	Myotis_lucifugus
ENSMICG00000015280	TARBP1	99	79.704	ENSNLEG00000002518	TARBP1	99	79.951	Nomascus_leucogenys
ENSMICG00000015280	TARBP1	65	62.017	ENSMEUG00000011370	-	67	61.265	Notamacropus_eugenii
ENSMICG00000015280	TARBP1	69	74.247	ENSOPRG00000013822	TARBP1	71	74.080	Ochotona_princeps
ENSMICG00000015280	TARBP1	99	67.286	ENSODEG00000005238	TARBP1	99	67.183	Octodon_degus
ENSMICG00000015280	TARBP1	82	66.837	ENSONIG00000009789	si:dkey-85a20.4	93	66.837	Oreochromis_niloticus
ENSMICG00000015280	TARBP1	99	77.346	ENSOCUG00000017418	TARBP1	99	77.160	Oryctolagus_cuniculus
ENSMICG00000015280	TARBP1	97	64.824	ENSORLG00000010529	si:dkey-85a20.4	85	39.341	Oryzias_latipes
ENSMICG00000015280	TARBP1	97	64.824	ENSORLG00020019264	si:dkey-85a20.4	85	39.130	Oryzias_latipes_hni
ENSMICG00000015280	TARBP1	97	64.824	ENSORLG00015003276	si:dkey-85a20.4	85	39.225	Oryzias_latipes_hsok
ENSMICG00000015280	TARBP1	99	77.620	ENSOGAG00000002379	TARBP1	99	77.682	Otolemur_garnettii
ENSMICG00000015280	TARBP1	98	75.611	ENSOARG00000003434	TARBP1	99	75.485	Ovis_aries
ENSMICG00000015280	TARBP1	83	80.029	ENSPPAG00000028097	TARBP1	99	80.586	Pan_paniscus
ENSMICG00000015280	TARBP1	94	75.758	ENSPPRG00000013561	TARBP1	99	69.144	Panthera_pardus
ENSMICG00000015280	TARBP1	82	76.155	ENSPTIG00000009281	TARBP1	99	76.155	Panthera_tigris_altaica
ENSMICG00000015280	TARBP1	99	79.754	ENSPTRG00000002124	TARBP1	99	79.914	Pan_troglodytes
ENSMICG00000015280	TARBP1	99	80.507	ENSPANG00000021933	TARBP1	99	80.494	Papio_anubis
ENSMICG00000015280	TARBP1	99	39.149	ENSPKIG00000016716	si:dkey-85a20.4	85	41.790	Paramormyrops_kingsleyae
ENSMICG00000015280	TARBP1	78	62.286	ENSPSIG00000010699	TARBP1	99	62.286	Pelodiscus_sinensis
ENSMICG00000015280	TARBP1	99	69.011	ENSPEMG00000006888	Tarbp1	99	69.011	Peromyscus_maniculatus_bairdii
ENSMICG00000015280	TARBP1	93	82.090	ENSPCIG00000029710	TARBP1	98	82.090	Phascolarctos_cinereus
ENSMICG00000015280	TARBP1	84	40.842	ENSPFOG00000013020	si:dkey-85a20.4	99	40.912	Poecilia_formosa
ENSMICG00000015280	TARBP1	99	38.144	ENSPLAG00000006044	si:dkey-85a20.4	85	40.871	Poecilia_latipinna
ENSMICG00000015280	TARBP1	99	38.047	ENSPMEG00000017857	si:dkey-85a20.4	87	40.109	Poecilia_mexicana
ENSMICG00000015280	TARBP1	99	38.241	ENSPREG00000022753	si:dkey-85a20.4	85	40.915	Poecilia_reticulata
ENSMICG00000015280	TARBP1	90	81.120	ENSPPYG00000000102	TARBP1	99	82.162	Pongo_abelii
ENSMICG00000015280	TARBP1	84	89.189	ENSPCAG00000004808	TARBP1	81	89.189	Procavia_capensis
ENSMICG00000015280	TARBP1	99	83.509	ENSPCOG00000005666	TARBP1	100	83.695	Propithecus_coquereli
ENSMICG00000015280	TARBP1	87	77.073	ENSPVAG00000014798	TARBP1	94	68.258	Pteropus_vampyrus
ENSMICG00000015280	TARBP1	99	39.035	ENSPNYG00000019135	si:dkey-85a20.4	85	41.816	Pundamilia_nyererei
ENSMICG00000015280	TARBP1	99	62.670	ENSRNOG00000053574	Tarbp1	99	62.028	Rattus_norvegicus
ENSMICG00000015280	TARBP1	97	78.492	ENSRBIG00000043362	TARBP1	99	90.625	Rhinopithecus_bieti
ENSMICG00000015280	TARBP1	99	76.890	ENSRROG00000029527	TARBP1	99	77.138	Rhinopithecus_roxellana
ENSMICG00000015280	TARBP1	88	82.759	ENSSBOG00000034503	TARBP1	99	93.478	Saimiri_boliviensis_boliviensis
ENSMICG00000015280	TARBP1	81	67.926	ENSSHAG00000000013	TARBP1	99	67.797	Sarcophilus_harrisii
ENSMICG00000015280	TARBP1	82	41.262	ENSSFOG00015002660	si:dkey-85a20.4	98	41.845	Scleropages_formosus
ENSMICG00000015280	TARBP1	90	40.558	ENSSMAG00000007081	si:dkey-85a20.4	87	41.379	Scophthalmus_maximus
ENSMICG00000015280	TARBP1	99	38.499	ENSSDUG00000023566	si:dkey-85a20.4	88	39.834	Seriola_dumerili
ENSMICG00000015280	TARBP1	99	38.862	ENSSLDG00000020200	si:dkey-85a20.4	88	41.064	Seriola_lalandi_dorsalis
ENSMICG00000015280	TARBP1	87	75.649	ENSSARG00000012207	TARBP1	89	75.649	Sorex_araneus
ENSMICG00000015280	TARBP1	99	58.987	ENSSPUG00000015364	TARBP1	99	58.900	Sphenodon_punctatus
ENSMICG00000015280	TARBP1	99	38.619	ENSSPAG00000007213	si:dkey-85a20.4	88	40.753	Stegastes_partitus
ENSMICG00000015280	TARBP1	99	77.094	ENSSSCG00000010160	TARBP1	99	77.538	Sus_scrofa
ENSMICG00000015280	TARBP1	79	61.022	ENSTGUG00000010214	TARBP1	100	61.022	Taeniopygia_guttata
ENSMICG00000015280	TARBP1	92	36.336	ENSTNIG00000016586	si:dkey-85a20.4	99	40.435	Tetraodon_nigroviridis
ENSMICG00000015280	TARBP1	84	91.111	ENSTTRG00000008707	TARBP1	90	91.111	Tursiops_truncatus
ENSMICG00000015280	TARBP1	81	75.940	ENSUMAG00000006730	TARBP1	99	75.940	Ursus_maritimus
ENSMICG00000015280	TARBP1	73	88.660	ENSVPAG00000007665	TARBP1	77	88.660	Vicugna_pacos
ENSMICG00000015280	TARBP1	85	76.207	ENSVVUG00000007460	TARBP1	93	80.976	Vulpes_vulpes
ENSMICG00000015280	TARBP1	83	51.347	ENSXETG00000016224	tarbp1	99	51.347	Xenopus_tropicalis
ENSMICG00000015280	TARBP1	76	44.658	ENSXCOG00000011779	si:dkey-85a20.4	93	44.658	Xiphophorus_couchianus
ENSMICG00000015280	TARBP1	63	39.758	ENSXMAG00000009600	si:dkey-85a20.4	100	39.758	Xiphophorus_maculatus