EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000015480 (Gene tree)
Gene ID: 105865707
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 13188 bases
Position: chr10:92331436-92344623
Accession: 105865707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000014107	zf-C2H2	PF00096.26	1.1e-12	1	2
ENSMICP00000014107	zf-C2H2	PF00096.26	1.1e-12	2	2
ENSMICP00000014107	zf-met	PF12874.7	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000015479	PRDM12-201	1089	XM_012754509	ENSMICP00000014107	362 (aa)	XP_012609963	UPI000643835F

Gene Model

Click here to download ENSMICG00000015480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000015480	PRDM12	66	47.273	ENSMICG00000001459	PRDM5	94	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015480	PRDM12	100	96.730	ENSG00000130711	PRDM12	100	96.730	Homo_sapiens
ENSMICG00000015480	PRDM12	99	74.740	ENSAPOG00000016051	prdm12b	93	78.212	Acanthochromis_polyacanthus
ENSMICG00000015480	PRDM12	99	63.032	ENSAPOG00000018234	-	96	65.722	Acanthochromis_polyacanthus
ENSMICG00000015480	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSMICG00000015480	PRDM12	91	79.827	ENSACIG00000019578	prdm12b	94	79.320	Amphilophus_citrinellus
ENSMICG00000015480	PRDM12	99	75.457	ENSACIG00000005193	-	96	77.686	Amphilophus_citrinellus
ENSMICG00000015480	PRDM12	99	76.053	ENSAOCG00000015040	prdm12b	93	79.661	Amphiprion_ocellaris
ENSMICG00000015480	PRDM12	90	79.464	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSMICG00000015480	PRDM12	99	76.658	ENSAPEG00000015092	prdm12b	93	80.342	Amphiprion_percula
ENSMICG00000015480	PRDM12	93	80.994	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSMICG00000015480	PRDM12	94	99.410	ENSANAG00000020616	PRDM12	99	99.410	Aotus_nancymaae
ENSMICG00000015480	PRDM12	90	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSMICG00000015480	PRDM12	99	78.297	ENSACLG00000011876	prdm12b	93	81.765	Astatotilapia_calliptera
ENSMICG00000015480	PRDM12	99	78.670	ENSAMXG00000008540	PRDM12	93	82.493	Astyanax_mexicanus
ENSMICG00000015480	PRDM12	91	88.323	ENSAMXG00000033665	prdm12b	94	86.744	Astyanax_mexicanus
ENSMICG00000015480	PRDM12	100	98.619	ENSBTAG00000023797	PRDM12	100	98.619	Bos_taurus
ENSMICG00000015480	PRDM12	100	98.066	ENSCJAG00000020540	PRDM12	100	98.066	Callithrix_jacchus
ENSMICG00000015480	PRDM12	88	97.196	ENSCAFG00000023076	PRDM12	99	97.196	Canis_familiaris
ENSMICG00000015480	PRDM12	100	98.352	ENSCAFG00020024046	PRDM12	100	98.352	Canis_lupus_dingo
ENSMICG00000015480	PRDM12	100	98.895	ENSCHIG00000025005	PRDM12	100	98.895	Capra_hircus
ENSMICG00000015480	PRDM12	86	98.083	ENSCPOG00000005901	PRDM12	95	98.083	Cavia_porcellus
ENSMICG00000015480	PRDM12	100	98.072	ENSCCAG00000037485	PRDM12	100	98.072	Cebus_capucinus
ENSMICG00000015480	PRDM12	100	98.072	ENSCATG00000020327	PRDM12	100	98.072	Cercocebus_atys
ENSMICG00000015480	PRDM12	92	97.904	ENSCLAG00000005499	PRDM12	92	97.904	Chinchilla_lanigera
ENSMICG00000015480	PRDM12	100	97.802	ENSCSAG00000014756	PRDM12	100	97.802	Chlorocebus_sabaeus
ENSMICG00000015480	PRDM12	100	89.779	ENSCPBG00000022628	PRDM12	96	92.962	Chrysemys_picta_bellii
ENSMICG00000015480	PRDM12	100	96.995	ENSCGRG00001015005	Prdm12	100	96.995	Cricetulus_griseus_chok1gshd
ENSMICG00000015480	PRDM12	99	77.358	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSMICG00000015480	PRDM12	91	77.778	ENSCVAG00000000944	-	94	75.000	Cyprinodon_variegatus
ENSMICG00000015480	PRDM12	99	82.258	ENSDARG00000007430	prdm12b	95	85.838	Danio_rerio
ENSMICG00000015480	PRDM12	99	97.796	ENSDNOG00000042302	PRDM12	99	97.796	Dasypus_novemcinctus
ENSMICG00000015480	PRDM12	89	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSMICG00000015480	PRDM12	100	98.343	ENSEASG00005008472	PRDM12	100	98.343	Equus_asinus_asinus
ENSMICG00000015480	PRDM12	100	98.066	ENSECAG00000005933	PRDM12	100	98.066	Equus_caballus
ENSMICG00000015480	PRDM12	99	80.000	ENSELUG00000009905	prdm12b	95	83.476	Esox_lucius
ENSMICG00000015480	PRDM12	99	76.731	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSMICG00000015480	PRDM12	100	98.623	ENSFCAG00000043086	PRDM12	100	98.623	Felis_catus
ENSMICG00000015480	PRDM12	100	90.055	ENSFALG00000001445	PRDM12	86	93.255	Ficedula_albicollis
ENSMICG00000015480	PRDM12	99	77.005	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSMICG00000015480	PRDM12	99	73.643	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSMICG00000015480	PRDM12	92	82.282	ENSGMOG00000011797	prdm12b	96	80.938	Gadus_morhua
ENSMICG00000015480	PRDM12	100	90.055	ENSGALG00000003895	PRDM12	96	93.255	Gallus_gallus
ENSMICG00000015480	PRDM12	99	78.630	ENSGAFG00000010827	prdm12b	93	81.609	Gambusia_affinis
ENSMICG00000015480	PRDM12	100	77.394	ENSGACG00000016713	prdm12b	93	81.844	Gasterosteus_aculeatus
ENSMICG00000015480	PRDM12	100	90.055	ENSGAGG00000014083	PRDM12	96	93.255	Gopherus_agassizii
ENSMICG00000015480	PRDM12	100	96.721	ENSGGOG00000010568	PRDM12	100	96.721	Gorilla_gorilla
ENSMICG00000015480	PRDM12	90	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSMICG00000015480	PRDM12	99	76.800	ENSHBUG00000022878	prdm12b	94	80.057	Haplochromis_burtoni
ENSMICG00000015480	PRDM12	100	95.342	ENSHGLG00000013939	PRDM12	100	95.342	Heterocephalus_glaber_female
ENSMICG00000015480	PRDM12	90	81.287	ENSHCOG00000003663	prdm12b	92	78.947	Hippocampus_comes
ENSMICG00000015480	PRDM12	99	73.098	ENSHCOG00000021167	-	95	76.246	Hippocampus_comes
ENSMICG00000015480	PRDM12	99	81.793	ENSIPUG00000017053	prdm12b	95	85.100	Ictalurus_punctatus
ENSMICG00000015480	PRDM12	99	76.164	ENSIPUG00000019544	PRDM12	95	79.420	Ictalurus_punctatus
ENSMICG00000015480	PRDM12	99	95.543	ENSSTOG00000005986	PRDM12	88	99.408	Ictidomys_tridecemlineatus
ENSMICG00000015480	PRDM12	91	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSMICG00000015480	PRDM12	99	76.374	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSMICG00000015480	PRDM12	90	78.492	ENSKMAG00000016921	prdm12b	89	77.961	Kryptolebias_marmoratus
ENSMICG00000015480	PRDM12	99	75.000	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSMICG00000015480	PRDM12	90	83.832	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSMICG00000015480	PRDM12	99	86.981	ENSLACG00000017560	PRDM12	96	90.000	Latimeria_chalumnae
ENSMICG00000015480	PRDM12	99	82.289	ENSLOCG00000005429	prdm12b	94	86.297	Lepisosteus_oculatus
ENSMICG00000015480	PRDM12	96	97.727	ENSLAFG00000006979	PRDM12	94	97.727	Loxodonta_africana
ENSMICG00000015480	PRDM12	100	95.913	ENSMFAG00000040322	PRDM12	100	95.913	Macaca_fascicularis
ENSMICG00000015480	PRDM12	100	98.072	ENSMNEG00000037234	PRDM12	100	98.072	Macaca_nemestrina
ENSMICG00000015480	PRDM12	90	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSMICG00000015480	PRDM12	91	82.405	ENSMAMG00000013212	prdm12b	93	80.857	Mastacembelus_armatus
ENSMICG00000015480	PRDM12	90	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSMICG00000015480	PRDM12	98	90.730	ENSMGAG00000005438	PRDM12	96	93.255	Meleagris_gallopavo
ENSMICG00000015480	PRDM12	100	95.890	ENSMAUG00000013040	Prdm12	100	95.890	Mesocricetus_auratus
ENSMICG00000015480	PRDM12	96	97.695	ENSMOCG00000021026	Prdm12	93	98.256	Microtus_ochrogaster
ENSMICG00000015480	PRDM12	100	91.989	ENSMODG00000012108	PRDM12	96	95.308	Monodelphis_domestica
ENSMICG00000015480	PRDM12	99	66.398	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSMICG00000015480	PRDM12	100	96.986	MGP_CAROLIEiJ_G0023414	Prdm12	100	96.986	Mus_caroli
ENSMICG00000015480	PRDM12	100	96.986	ENSMUSG00000079466	Prdm12	100	96.986	Mus_musculus
ENSMICG00000015480	PRDM12	100	96.986	MGP_PahariEiJ_G0024871	Prdm12	100	96.986	Mus_pahari
ENSMICG00000015480	PRDM12	100	96.986	MGP_SPRETEiJ_G0024331	Prdm12	100	96.986	Mus_spretus
ENSMICG00000015480	PRDM12	100	94.475	ENSNGAG00000018480	Prdm12	100	94.475	Nannospalax_galili
ENSMICG00000015480	PRDM12	99	72.581	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSMICG00000015480	PRDM12	99	75.926	ENSNBRG00000006727	prdm12b	94	79.379	Neolamprologus_brichardi
ENSMICG00000015480	PRDM12	100	81.768	ENSMEUG00000003828	PRDM12	96	84.457	Notamacropus_eugenii
ENSMICG00000015480	PRDM12	91	98.788	ENSOPRG00000008680	PRDM12	100	98.788	Ochotona_princeps
ENSMICG00000015480	PRDM12	95	97.959	ENSODEG00000016282	PRDM12	64	97.959	Octodon_degus
ENSMICG00000015480	PRDM12	62	90.222	ENSOANG00000001043	PRDM12	94	96.078	Ornithorhynchus_anatinus
ENSMICG00000015480	PRDM12	86	93.610	ENSOCUG00000008241	PRDM12	100	93.610	Oryctolagus_cuniculus
ENSMICG00000015480	PRDM12	90	79.765	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSMICG00000015480	PRDM12	99	77.067	ENSORLG00000007114	prdm12b	93	80.114	Oryzias_latipes
ENSMICG00000015480	PRDM12	90	79.532	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSMICG00000015480	PRDM12	91	80.692	ENSORLG00020019565	prdm12b	94	79.444	Oryzias_latipes_hni
ENSMICG00000015480	PRDM12	100	75.462	ENSORLG00015007621	prdm12b	93	79.545	Oryzias_latipes_hsok
ENSMICG00000015480	PRDM12	90	79.765	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSMICG00000015480	PRDM12	99	74.219	ENSOMEG00000007762	-	96	77.222	Oryzias_melastigma
ENSMICG00000015480	PRDM12	100	75.718	ENSOMEG00000004134	prdm12b	95	78.788	Oryzias_melastigma
ENSMICG00000015480	PRDM12	92	100.000	ENSOGAG00000007557	PRDM12	100	100.000	Otolemur_garnettii
ENSMICG00000015480	PRDM12	79	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSMICG00000015480	PRDM12	100	87.879	ENSPPRG00000023024	PRDM12	92	87.879	Panthera_pardus
ENSMICG00000015480	PRDM12	100	96.995	ENSPTRG00000021475	PRDM12	100	96.995	Pan_troglodytes
ENSMICG00000015480	PRDM12	100	96.995	ENSPTRG00000043324	-	100	96.995	Pan_troglodytes
ENSMICG00000015480	PRDM12	100	98.072	ENSPANG00000025967	PRDM12	100	98.072	Papio_anubis
ENSMICG00000015480	PRDM12	99	80.526	ENSPKIG00000007228	prdm12b	95	85.227	Paramormyrops_kingsleyae
ENSMICG00000015480	PRDM12	93	78.902	ENSPKIG00000004305	PRDM12	99	78.063	Paramormyrops_kingsleyae
ENSMICG00000015480	PRDM12	100	89.227	ENSPSIG00000006739	PRDM12	96	92.375	Pelodiscus_sinensis
ENSMICG00000015480	PRDM12	99	73.107	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSMICG00000015480	PRDM12	91	83.136	ENSPMGG00000008867	prdm12b	93	81.844	Periophthalmus_magnuspinnatus
ENSMICG00000015480	PRDM12	99	92.521	ENSPEMG00000009969	Prdm12	91	99.096	Peromyscus_maniculatus_bairdii
ENSMICG00000015480	PRDM12	100	92.265	ENSPCIG00000024119	PRDM12	96	95.601	Phascolarctos_cinereus
ENSMICG00000015480	PRDM12	99	78.016	ENSPFOG00000019841	prdm12b	95	81.197	Poecilia_formosa
ENSMICG00000015480	PRDM12	91	83.333	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSMICG00000015480	PRDM12	89	82.371	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSMICG00000015480	PRDM12	91	83.186	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSMICG00000015480	PRDM12	96	73.611	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSMICG00000015480	PRDM12	97	96.581	ENSPPYG00000019694	PRDM12	100	96.581	Pongo_abelii
ENSMICG00000015480	PRDM12	100	98.087	ENSPCOG00000022255	PRDM12	100	98.087	Propithecus_coquereli
ENSMICG00000015480	PRDM12	100	97.011	ENSPVAG00000001511	PRDM12	100	97.011	Pteropus_vampyrus
ENSMICG00000015480	PRDM12	90	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSMICG00000015480	PRDM12	99	76.127	ENSPNYG00000009607	prdm12b	94	79.320	Pundamilia_nyererei
ENSMICG00000015480	PRDM12	99	83.152	ENSPNAG00000024532	prdm12b	94	87.320	Pygocentrus_nattereri
ENSMICG00000015480	PRDM12	90	80.909	ENSPNAG00000013396	PRDM12	92	78.363	Pygocentrus_nattereri
ENSMICG00000015480	PRDM12	100	96.986	ENSRNOG00000009218	Prdm12	100	96.986	Rattus_norvegicus
ENSMICG00000015480	PRDM12	88	99.369	ENSRBIG00000042712	PRDM12	96	93.372	Rhinopithecus_bieti
ENSMICG00000015480	PRDM12	89	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSMICG00000015480	PRDM12	100	91.460	ENSSHAG00000015972	PRDM12	96	94.737	Sarcophilus_harrisii
ENSMICG00000015480	PRDM12	91	79.772	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSMICG00000015480	PRDM12	93	81.341	ENSSDUG00000019071	-	95	81.341	Seriola_dumerili
ENSMICG00000015480	PRDM12	99	74.742	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSMICG00000015480	PRDM12	99	75.065	ENSSLDG00000009557	prdm12b	90	81.924	Seriola_lalandi_dorsalis
ENSMICG00000015480	PRDM12	99	78.788	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSMICG00000015480	PRDM12	100	89.503	ENSSPUG00000013424	PRDM12	96	92.669	Sphenodon_punctatus
ENSMICG00000015480	PRDM12	99	75.853	ENSSPAG00000018824	prdm12b	93	79.437	Stegastes_partitus
ENSMICG00000015480	PRDM12	90	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSMICG00000015480	PRDM12	100	98.352	ENSSSCG00000005703	PRDM12	100	98.352	Sus_scrofa
ENSMICG00000015480	PRDM12	99	76.455	ENSTRUG00000018659	prdm12b	93	81.739	Takifugu_rubripes
ENSMICG00000015480	PRDM12	99	75.610	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSMICG00000015480	PRDM12	99	75.749	ENSTNIG00000005859	-	99	77.337	Tetraodon_nigroviridis
ENSMICG00000015480	PRDM12	99	76.781	ENSTNIG00000009020	prdm12b	91	83.481	Tetraodon_nigroviridis
ENSMICG00000015480	PRDM12	97	98.571	ENSUAMG00000009653	PRDM12	97	98.571	Ursus_americanus
ENSMICG00000015480	PRDM12	92	100.000	ENSVVUG00000027662	PRDM12	79	100.000	Vulpes_vulpes
ENSMICG00000015480	PRDM12	91	83.036	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSMICG00000015480	PRDM12	90	83.234	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus
ENSMICG00000015480	PRDM12	91	80.294	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus