EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000015767 (Gene tree)
Gene ID: 105868892
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 11160 bases
Position: chr9:115322063-115333222
Accession: 105868892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000037360	CPSF_A	PF03178.15	5.1e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000044294	CPSF1-201	4533	XM_012760247	ENSMICP00000037360	1441 (aa)	XP_012615701	UPI000643A5BA

Gene Model

Click here to download ENSMICG00000015767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015767	CPSF1	100	97.505	ENSG00000071894	CPSF1	100	97.505	Homo_sapiens
ENSMICG00000015767	CPSF1	100	77.890	ENSAPOG00000019621	cpsf1	100	78.161	Acanthochromis_polyacanthus
ENSMICG00000015767	CPSF1	97	95.568	ENSAMEG00000005557	CPSF1	100	95.568	Ailuropoda_melanoleuca
ENSMICG00000015767	CPSF1	100	77.909	ENSACIG00000006112	cpsf1	100	78.255	Amphilophus_citrinellus
ENSMICG00000015767	CPSF1	100	79.545	ENSAOCG00000007120	cpsf1	100	79.614	Amphiprion_ocellaris
ENSMICG00000015767	CPSF1	100	79.669	ENSAPEG00000005755	cpsf1	100	80.041	Amphiprion_percula
ENSMICG00000015767	CPSF1	100	77.546	ENSATEG00000011097	cpsf1	100	78.003	Anabas_testudineus
ENSMICG00000015767	CPSF1	93	81.608	ENSACAG00000009655	CPSF1	100	81.608	Anolis_carolinensis
ENSMICG00000015767	CPSF1	100	97.573	ENSANAG00000036514	CPSF1	100	97.573	Aotus_nancymaae
ENSMICG00000015767	CPSF1	100	77.216	ENSACLG00000012231	cpsf1	99	78.732	Astatotilapia_calliptera
ENSMICG00000015767	CPSF1	100	74.066	ENSAMXG00000008485	cpsf1	100	74.136	Astyanax_mexicanus
ENSMICG00000015767	CPSF1	100	95.031	ENSBTAG00000008355	CPSF1	100	95.389	Bos_taurus
ENSMICG00000015767	CPSF1	100	32.322	WBGene00022301	cpsf-1	100	40.169	Caenorhabditis_elegans
ENSMICG00000015767	CPSF1	100	97.503	ENSCJAG00000021421	CPSF1	100	97.503	Callithrix_jacchus
ENSMICG00000015767	CPSF1	97	97.139	ENSCAFG00000001600	CPSF1	100	97.651	Canis_familiaris
ENSMICG00000015767	CPSF1	100	97.299	ENSCAFG00020020821	CPSF1	100	97.299	Canis_lupus_dingo
ENSMICG00000015767	CPSF1	100	91.331	ENSCHIG00000015833	CPSF1	100	91.331	Capra_hircus
ENSMICG00000015767	CPSF1	100	97.920	ENSTSYG00000028560	CPSF1	100	97.920	Carlito_syrichta
ENSMICG00000015767	CPSF1	97	95.839	ENSCAPG00000014921	CPSF1	99	95.839	Cavia_aperea
ENSMICG00000015767	CPSF1	100	95.423	ENSCPOG00000011448	CPSF1	100	95.423	Cavia_porcellus
ENSMICG00000015767	CPSF1	100	97.642	ENSCCAG00000037658	CPSF1	100	97.642	Cebus_capucinus
ENSMICG00000015767	CPSF1	100	97.434	ENSCATG00000037234	CPSF1	100	97.434	Cercocebus_atys
ENSMICG00000015767	CPSF1	100	97.224	ENSCLAG00000012166	CPSF1	100	97.224	Chinchilla_lanigera
ENSMICG00000015767	CPSF1	100	97.365	ENSCSAG00000008502	CPSF1	100	97.365	Chlorocebus_sabaeus
ENSMICG00000015767	CPSF1	99	87.745	ENSCPBG00000018910	CPSF1	96	87.745	Chrysemys_picta_bellii
ENSMICG00000015767	CPSF1	96	48.672	ENSCING00000000514	-	100	48.600	Ciona_intestinalis
ENSMICG00000015767	CPSF1	99	48.041	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSMICG00000015767	CPSF1	99	91.882	ENSCANG00000032760	CPSF1	99	91.882	Colobus_angolensis_palliatus
ENSMICG00000015767	CPSF1	100	96.808	ENSCGRG00001016344	Cpsf1	100	96.808	Cricetulus_griseus_chok1gshd
ENSMICG00000015767	CPSF1	100	94.795	ENSCGRG00000003118	Cpsf1	100	94.795	Cricetulus_griseus_crigri
ENSMICG00000015767	CPSF1	100	77.547	ENSCSEG00000013464	cpsf1	100	77.755	Cynoglossus_semilaevis
ENSMICG00000015767	CPSF1	85	76.957	ENSCVAG00000014059	cpsf1	100	75.463	Cyprinodon_variegatus
ENSMICG00000015767	CPSF1	100	79.462	ENSDARG00000034178	cpsf1	100	79.531	Danio_rerio
ENSMICG00000015767	CPSF1	68	97.101	ENSDNOG00000043654	CPSF1	94	97.101	Dasypus_novemcinctus
ENSMICG00000015767	CPSF1	97	96.628	ENSDORG00000006278	Cpsf1	99	96.628	Dipodomys_ordii
ENSMICG00000015767	CPSF1	100	45.363	FBgn0024698	Cpsf160	100	45.406	Drosophila_melanogaster
ENSMICG00000015767	CPSF1	80	98.658	ENSETEG00000006022	CPSF1	83	98.658	Echinops_telfairi
ENSMICG00000015767	CPSF1	100	97.715	ENSEASG00005010774	CPSF1	100	97.715	Equus_asinus_asinus
ENSMICG00000015767	CPSF1	100	97.715	ENSECAG00000022209	CPSF1	100	97.715	Equus_caballus
ENSMICG00000015767	CPSF1	100	94.948	ENSEEUG00000000471	CPSF1	100	94.948	Erinaceus_europaeus
ENSMICG00000015767	CPSF1	100	78.478	ENSELUG00000012271	cpsf1	100	78.958	Esox_lucius
ENSMICG00000015767	CPSF1	100	97.085	ENSFDAG00000016060	CPSF1	100	97.085	Fukomys_damarensis
ENSMICG00000015767	CPSF1	100	77.050	ENSFHEG00000016801	cpsf1	100	77.119	Fundulus_heteroclitus
ENSMICG00000015767	CPSF1	100	77.992	ENSGMOG00000000796	cpsf1	100	78.360	Gadus_morhua
ENSMICG00000015767	CPSF1	95	83.929	ENSGAFG00000018890	cpsf1	100	83.929	Gambusia_affinis
ENSMICG00000015767	CPSF1	100	78.675	ENSGACG00000008703	cpsf1	100	78.734	Gasterosteus_aculeatus
ENSMICG00000015767	CPSF1	100	83.829	ENSGAGG00000004276	CPSF1	98	87.825	Gopherus_agassizii
ENSMICG00000015767	CPSF1	100	97.710	ENSGGOG00000016185	CPSF1	100	97.710	Gorilla_gorilla
ENSMICG00000015767	CPSF1	100	79.501	ENSHBUG00000018900	cpsf1	100	79.571	Haplochromis_burtoni
ENSMICG00000015767	CPSF1	100	96.947	ENSHGLG00000016139	CPSF1	100	96.947	Heterocephalus_glaber_female
ENSMICG00000015767	CPSF1	100	96.877	ENSHGLG00100009750	CPSF1	100	96.877	Heterocephalus_glaber_male
ENSMICG00000015767	CPSF1	100	76.782	ENSHCOG00000018509	cpsf1	100	76.782	Hippocampus_comes
ENSMICG00000015767	CPSF1	100	76.616	ENSIPUG00000011259	cpsf1	100	76.616	Ictalurus_punctatus
ENSMICG00000015767	CPSF1	97	96.998	ENSSTOG00000009957	CPSF1	99	96.998	Ictidomys_tridecemlineatus
ENSMICG00000015767	CPSF1	100	96.669	ENSJJAG00000023002	Cpsf1	100	96.669	Jaculus_jaculus
ENSMICG00000015767	CPSF1	91	85.580	ENSKMAG00000001940	cpsf1	99	85.580	Kryptolebias_marmoratus
ENSMICG00000015767	CPSF1	100	77.168	ENSLBEG00000003601	cpsf1	100	77.671	Labrus_bergylta
ENSMICG00000015767	CPSF1	88	81.490	ENSLACG00000000233	CPSF1	100	68.861	Latimeria_chalumnae
ENSMICG00000015767	CPSF1	100	78.384	ENSLOCG00000008484	cpsf1	100	78.660	Lepisosteus_oculatus
ENSMICG00000015767	CPSF1	97	96.206	ENSLAFG00000022601	CPSF1	100	96.206	Loxodonta_africana
ENSMICG00000015767	CPSF1	100	97.295	ENSMFAG00000037013	CPSF1	100	97.295	Macaca_fascicularis
ENSMICG00000015767	CPSF1	100	97.365	ENSMMUG00000007380	CPSF1	100	97.365	Macaca_mulatta
ENSMICG00000015767	CPSF1	97	97.489	ENSMNEG00000043564	CPSF1	100	97.489	Macaca_nemestrina
ENSMICG00000015767	CPSF1	100	97.365	ENSMLEG00000043010	CPSF1	100	97.365	Mandrillus_leucophaeus
ENSMICG00000015767	CPSF1	100	78.161	ENSMAMG00000003803	cpsf1	100	78.499	Mastacembelus_armatus
ENSMICG00000015767	CPSF1	100	77.355	ENSMZEG00005001168	cpsf1	100	77.562	Maylandia_zebra
ENSMICG00000015767	CPSF1	100	96.738	ENSMAUG00000003601	Cpsf1	100	96.738	Mesocricetus_auratus
ENSMICG00000015767	CPSF1	100	96.947	ENSMOCG00000022758	Cpsf1	100	96.947	Microtus_ochrogaster
ENSMICG00000015767	CPSF1	100	78.616	ENSMMOG00000021245	cpsf1	100	79.031	Mola_mola
ENSMICG00000015767	CPSF1	100	93.168	ENSMODG00000010755	CPSF1	100	93.168	Monodelphis_domestica
ENSMICG00000015767	CPSF1	100	77.454	ENSMALG00000020545	cpsf1	100	77.861	Monopterus_albus
ENSMICG00000015767	CPSF1	100	97.363	MGP_CAROLIEiJ_G0019936	Cpsf1	100	97.363	Mus_caroli
ENSMICG00000015767	CPSF1	100	97.294	ENSMUSG00000034022	Cpsf1	100	97.294	Mus_musculus
ENSMICG00000015767	CPSF1	100	97.224	MGP_PahariEiJ_G0019946	Cpsf1	100	97.224	Mus_pahari
ENSMICG00000015767	CPSF1	100	97.294	MGP_SPRETEiJ_G0020839	Cpsf1	100	97.294	Mus_spretus
ENSMICG00000015767	CPSF1	94	96.664	ENSMPUG00000006419	CPSF1	93	96.664	Mustela_putorius_furo
ENSMICG00000015767	CPSF1	100	96.808	ENSNGAG00000022460	Cpsf1	100	96.808	Nannospalax_galili
ENSMICG00000015767	CPSF1	100	74.948	ENSNBRG00000000813	cpsf1	100	74.948	Neolamprologus_brichardi
ENSMICG00000015767	CPSF1	86	86.108	ENSNLEG00000010633	-	100	88.889	Nomascus_leucogenys
ENSMICG00000015767	CPSF1	82	97.674	ENSMEUG00000014922	CPSF1	85	97.674	Notamacropus_eugenii
ENSMICG00000015767	CPSF1	61	97.449	ENSOPRG00000004693	-	71	97.449	Ochotona_princeps
ENSMICG00000015767	CPSF1	100	97.363	ENSODEG00000013995	CPSF1	100	97.363	Octodon_degus
ENSMICG00000015767	CPSF1	100	79.848	ENSONIG00000007676	cpsf1	100	79.917	Oreochromis_niloticus
ENSMICG00000015767	CPSF1	58	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSMICG00000015767	CPSF1	100	77.430	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSMICG00000015767	CPSF1	100	77.566	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSMICG00000015767	CPSF1	100	77.415	ENSORLG00015009979	cpsf1	100	77.551	Oryzias_latipes_hsok
ENSMICG00000015767	CPSF1	100	77.112	ENSOMEG00000011849	cpsf1	100	77.520	Oryzias_melastigma
ENSMICG00000015767	CPSF1	100	98.752	ENSOGAG00000000315	CPSF1	100	98.752	Otolemur_garnettii
ENSMICG00000015767	CPSF1	100	97.712	ENSPPAG00000019280	CPSF1	100	97.712	Pan_paniscus
ENSMICG00000015767	CPSF1	100	96.046	ENSPTRG00000051253	-	100	96.046	Pan_troglodytes
ENSMICG00000015767	CPSF1	100	97.712	ENSPTRG00000049288	-	100	97.712	Pan_troglodytes
ENSMICG00000015767	CPSF1	97	97.346	ENSPANG00000015005	CPSF1	100	97.346	Papio_anubis
ENSMICG00000015767	CPSF1	100	80.484	ENSPKIG00000002582	cpsf1	100	81.032	Paramormyrops_kingsleyae
ENSMICG00000015767	CPSF1	100	93.099	ENSPCIG00000009035	CPSF1	100	93.099	Phascolarctos_cinereus
ENSMICG00000015767	CPSF1	100	76.506	ENSPFOG00000012870	cpsf1	100	76.642	Poecilia_formosa
ENSMICG00000015767	CPSF1	100	76.184	ENSPREG00000016307	cpsf1	100	76.387	Poecilia_reticulata
ENSMICG00000015767	CPSF1	100	89.390	ENSPPYG00000018973	CPSF1	100	89.390	Pongo_abelii
ENSMICG00000015767	CPSF1	91	95.170	ENSPCAG00000011541	CPSF1	94	95.170	Procavia_capensis
ENSMICG00000015767	CPSF1	100	95.284	ENSPCOG00000020001	CPSF1	100	95.284	Propithecus_coquereli
ENSMICG00000015767	CPSF1	91	99.143	ENSPVAG00000006761	CPSF1	91	99.143	Pteropus_vampyrus
ENSMICG00000015767	CPSF1	100	78.469	ENSPNYG00000004906	cpsf1	100	78.537	Pundamilia_nyererei
ENSMICG00000015767	CPSF1	100	75.190	ENSPNAG00000024395	cpsf1	100	75.190	Pygocentrus_nattereri
ENSMICG00000015767	CPSF1	100	97.294	ENSRNOG00000030705	Cpsf1	100	97.294	Rattus_norvegicus
ENSMICG00000015767	CPSF1	100	97.365	ENSRBIG00000044907	CPSF1	100	97.365	Rhinopithecus_bieti
ENSMICG00000015767	CPSF1	100	97.295	ENSRROG00000044861	CPSF1	100	97.295	Rhinopithecus_roxellana
ENSMICG00000015767	CPSF1	97	97.633	ENSSBOG00000027177	CPSF1	100	97.633	Saimiri_boliviensis_boliviensis
ENSMICG00000015767	CPSF1	100	93.168	ENSSHAG00000006500	CPSF1	100	93.168	Sarcophilus_harrisii
ENSMICG00000015767	CPSF1	100	78.291	ENSSFOG00015004606	cpsf1	100	81.455	Scleropages_formosus
ENSMICG00000015767	CPSF1	100	78.064	ENSSMAG00000020547	cpsf1	100	78.131	Scophthalmus_maximus
ENSMICG00000015767	CPSF1	100	79.184	ENSSDUG00000001100	cpsf1	100	79.461	Seriola_dumerili
ENSMICG00000015767	CPSF1	100	79.377	ENSSLDG00000003619	cpsf1	100	79.516	Seriola_lalandi_dorsalis
ENSMICG00000015767	CPSF1	89	95.833	ENSSARG00000003643	CPSF1	92	95.833	Sorex_araneus
ENSMICG00000015767	CPSF1	96	87.743	ENSSPUG00000014396	CPSF1	100	87.743	Sphenodon_punctatus
ENSMICG00000015767	CPSF1	100	77.876	ENSSPAG00000005349	cpsf1	100	78.214	Stegastes_partitus
ENSMICG00000015767	CPSF1	100	96.330	ENSSSCG00000005906	CPSF1	100	96.330	Sus_scrofa
ENSMICG00000015767	CPSF1	96	77.801	ENSTRUG00000013134	cpsf1	99	77.965	Takifugu_rubripes
ENSMICG00000015767	CPSF1	100	78.694	ENSTNIG00000014027	cpsf1	100	78.763	Tetraodon_nigroviridis
ENSMICG00000015767	CPSF1	77	89.655	ENSTBEG00000001756	CPSF1	91	89.655	Tupaia_belangeri
ENSMICG00000015767	CPSF1	90	98.100	ENSTTRG00000001937	CPSF1	90	98.100	Tursiops_truncatus
ENSMICG00000015767	CPSF1	97	97.282	ENSUAMG00000006476	CPSF1	98	97.282	Ursus_americanus
ENSMICG00000015767	CPSF1	100	77.370	ENSXCOG00000003608	cpsf1	100	77.647	Xiphophorus_couchianus
ENSMICG00000015767	CPSF1	100	77.125	ENSXMAG00000005798	cpsf1	100	77.263	Xiphophorus_maculatus