EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000015768 (Gene tree)
Gene ID: 105863389
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 74112 bases
Position: chrX:59849845-59923956
Accession: 105863389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024613	ResIII	PF04851.15	1.5e-12	1	1
ENSMICP00000014375	ResIII	PF04851.15	1.5e-12	1	1
ENSMICP00000024613	DEAD	PF00270.29	1.5e-06	1	1
ENSMICP00000014375	DEAD	PF00270.29	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000015777	SMARCA1-202	3210	-	ENSMICP00000014375	1069 (aa)	XP_012605839	UPI000643716E
ENSMICT00000046414	SMARCA1-201	3839	XM_012750386	ENSMICP00000024613	1057 (aa)	XP_012605840	UPI000643471F

Gene Model

Click here to download ENSMICG00000015768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000015768	SMARCA1	54	43.433	ENSMICG00000002497	CHD1L	87	41.969
ENSMICG00000015768	SMARCA1	50	40.989	ENSMICG00000016641	CHD6	75	40.048
ENSMICG00000015768	SMARCA1	93	85.772	ENSMICG00000003971	SMARCA5	99	84.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015768	SMARCA1	100	98.299	ENSG00000102038	SMARCA1	100	98.299	Homo_sapiens
ENSMICG00000015768	SMARCA1	92	84.016	ENSAPOG00000016035	smarca5	98	84.245	Acanthochromis_polyacanthus
ENSMICG00000015768	SMARCA1	100	96.729	ENSAMEG00000015218	SMARCA1	100	96.729	Ailuropoda_melanoleuca
ENSMICG00000015768	SMARCA1	85	84.275	ENSACIG00000016982	smarca5	99	84.375	Amphilophus_citrinellus
ENSMICG00000015768	SMARCA1	92	84.016	ENSAOCG00000015578	smarca5	95	83.030	Amphiprion_ocellaris
ENSMICG00000015768	SMARCA1	92	84.016	ENSAPEG00000011117	smarca5	99	84.316	Amphiprion_percula
ENSMICG00000015768	SMARCA1	95	81.665	ENSATEG00000012894	smarca5	97	81.990	Anabas_testudineus
ENSMICG00000015768	SMARCA1	93	93.075	ENSAPLG00000013149	SMARCA1	100	93.075	Anas_platyrhynchos
ENSMICG00000015768	SMARCA1	97	90.107	ENSACAG00000011376	SMARCA1	95	91.908	Anolis_carolinensis
ENSMICG00000015768	SMARCA1	98	92.871	ENSANAG00000023098	SMARCA1	98	93.064	Aotus_nancymaae
ENSMICG00000015768	SMARCA1	93	84.012	ENSACLG00000025356	smarca5	95	83.434	Astatotilapia_calliptera
ENSMICG00000015768	SMARCA1	88	88.710	ENSAMXG00000011227	smarca1	99	90.303	Astyanax_mexicanus
ENSMICG00000015768	SMARCA1	97	81.402	ENSAMXG00000005709	smarca5	94	84.308	Astyanax_mexicanus
ENSMICG00000015768	SMARCA1	99	96.978	ENSBTAG00000002292	SMARCA1	99	97.048	Bos_taurus
ENSMICG00000015768	SMARCA1	93	63.572	WBGene00002169	isw-1	97	63.572	Caenorhabditis_elegans
ENSMICG00000015768	SMARCA1	100	98.110	ENSCJAG00000002868	SMARCA1	100	98.110	Callithrix_jacchus
ENSMICG00000015768	SMARCA1	100	88.011	ENSCAFG00000018673	SMARCA1	99	88.706	Canis_familiaris
ENSMICG00000015768	SMARCA1	100	98.110	ENSCAFG00020001751	SMARCA1	100	98.110	Canis_lupus_dingo
ENSMICG00000015768	SMARCA1	100	97.078	ENSCHIG00000009837	SMARCA1	100	97.078	Capra_hircus
ENSMICG00000015768	SMARCA1	96	97.556	ENSTSYG00000004240	SMARCA1	98	97.862	Carlito_syrichta
ENSMICG00000015768	SMARCA1	98	95.511	ENSCPOG00000013601	SMARCA1	99	95.511	Cavia_porcellus
ENSMICG00000015768	SMARCA1	100	95.085	ENSCCAG00000030817	SMARCA1	100	95.085	Cebus_capucinus
ENSMICG00000015768	SMARCA1	100	98.224	ENSCATG00000015921	SMARCA1	100	98.224	Cercocebus_atys
ENSMICG00000015768	SMARCA1	100	96.597	ENSCLAG00000002171	SMARCA1	100	96.597	Chinchilla_lanigera
ENSMICG00000015768	SMARCA1	100	98.393	ENSCSAG00000008460	SMARCA1	100	98.393	Chlorocebus_sabaeus
ENSMICG00000015768	SMARCA1	95	92.907	ENSCPBG00000001146	SMARCA1	95	92.907	Chrysemys_picta_bellii
ENSMICG00000015768	SMARCA1	93	73.085	ENSCING00000004110	swi/snf	98	73.085	Ciona_intestinalis
ENSMICG00000015768	SMARCA1	92	73.183	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSMICG00000015768	SMARCA1	100	98.204	ENSCANG00000007183	SMARCA1	100	98.204	Colobus_angolensis_palliatus
ENSMICG00000015768	SMARCA1	100	94.145	ENSCGRG00001010776	Smarca1	98	95.573	Cricetulus_griseus_chok1gshd
ENSMICG00000015768	SMARCA1	93	95.960	ENSCGRG00000015301	Smarca1	98	96.057	Cricetulus_griseus_crigri
ENSMICG00000015768	SMARCA1	92	84.016	ENSCSEG00000000328	smarca5	95	83.232	Cynoglossus_semilaevis
ENSMICG00000015768	SMARCA1	93	83.401	ENSCVAG00000008668	smarca5	99	83.863	Cyprinodon_variegatus
ENSMICG00000015768	SMARCA1	94	82.912	ENSDARG00000052348	smarca5	95	82.912	Danio_rerio
ENSMICG00000015768	SMARCA1	94	85.390	ENSDARG00000012776	smarca1	98	85.390	Danio_rerio
ENSMICG00000015768	SMARCA1	98	95.942	ENSDNOG00000004315	SMARCA1	99	95.942	Dasypus_novemcinctus
ENSMICG00000015768	SMARCA1	98	96.035	ENSDORG00000009270	Smarca1	97	96.252	Dipodomys_ordii
ENSMICG00000015768	SMARCA1	92	72.838	FBgn0011604	Iswi	98	72.485	Drosophila_melanogaster
ENSMICG00000015768	SMARCA1	77	94.545	ENSETEG00000017426	SMARCA1	85	94.545	Echinops_telfairi
ENSMICG00000015768	SMARCA1	93	81.001	ENSEBUG00000001239	smarca5	96	81.001	Eptatretus_burgeri
ENSMICG00000015768	SMARCA1	97	92.596	ENSEASG00005008218	SMARCA1	100	93.232	Equus_asinus_asinus
ENSMICG00000015768	SMARCA1	100	97.549	ENSECAG00000012106	SMARCA1	100	97.549	Equus_caballus
ENSMICG00000015768	SMARCA1	75	97.020	ENSEEUG00000014927	SMARCA1	83	97.020	Erinaceus_europaeus
ENSMICG00000015768	SMARCA1	98	84.541	ENSELUG00000010515	smarca1	99	86.333	Esox_lucius
ENSMICG00000015768	SMARCA1	100	98.316	ENSFCAG00000018496	SMARCA1	100	98.316	Felis_catus
ENSMICG00000015768	SMARCA1	86	93.428	ENSFALG00000000209	SMARCA1	98	93.531	Ficedula_albicollis
ENSMICG00000015768	SMARCA1	93	98.184	ENSFDAG00000009818	SMARCA1	97	98.184	Fukomys_damarensis
ENSMICG00000015768	SMARCA1	93	83.809	ENSFHEG00000007687	smarca5	94	83.232	Fundulus_heteroclitus
ENSMICG00000015768	SMARCA1	94	90.909	ENSGALG00000008431	SMARCA1	99	90.647	Gallus_gallus
ENSMICG00000015768	SMARCA1	93	83.809	ENSGAFG00000017731	smarca5	95	83.232	Gambusia_affinis
ENSMICG00000015768	SMARCA1	92	93.519	ENSGAGG00000023575	SMARCA1	100	93.519	Gopherus_agassizii
ENSMICG00000015768	SMARCA1	70	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSMICG00000015768	SMARCA1	100	96.503	ENSHGLG00000003080	SMARCA1	100	96.503	Heterocephalus_glaber_female
ENSMICG00000015768	SMARCA1	94	96.503	ENSHGLG00100001102	SMARCA1	100	96.503	Heterocephalus_glaber_male
ENSMICG00000015768	SMARCA1	92	83.845	ENSHCOG00000005458	smarca5	97	82.090	Hippocampus_comes
ENSMICG00000015768	SMARCA1	97	80.252	ENSIPUG00000005229	SMARCA5	97	82.961	Ictalurus_punctatus
ENSMICG00000015768	SMARCA1	95	85.332	ENSIPUG00000016905	Smarca1	99	86.925	Ictalurus_punctatus
ENSMICG00000015768	SMARCA1	100	97.732	ENSSTOG00000014524	SMARCA1	100	97.732	Ictidomys_tridecemlineatus
ENSMICG00000015768	SMARCA1	98	95.873	ENSJJAG00000002593	Smarca1	98	95.873	Jaculus_jaculus
ENSMICG00000015768	SMARCA1	92	84.049	ENSKMAG00000003777	smarca5	95	83.333	Kryptolebias_marmoratus
ENSMICG00000015768	SMARCA1	94	82.929	ENSLBEG00000018112	smarca5	95	82.929	Labrus_bergylta
ENSMICG00000015768	SMARCA1	88	84.211	ENSLBEG00000013295	SMARCA1	100	85.082	Labrus_bergylta
ENSMICG00000015768	SMARCA1	98	88.652	ENSLACG00000016697	SMARCA1	99	88.555	Latimeria_chalumnae
ENSMICG00000015768	SMARCA1	98	85.347	ENSLOCG00000014591	smarca1	97	89.067	Lepisosteus_oculatus
ENSMICG00000015768	SMARCA1	95	96.819	ENSLAFG00000000896	SMARCA1	100	96.819	Loxodonta_africana
ENSMICG00000015768	SMARCA1	100	98.299	ENSMFAG00000002117	SMARCA1	100	98.224	Macaca_fascicularis
ENSMICG00000015768	SMARCA1	100	98.224	ENSMMUG00000008818	SMARCA1	100	98.224	Macaca_mulatta
ENSMICG00000015768	SMARCA1	100	98.224	ENSMNEG00000041768	SMARCA1	100	98.224	Macaca_nemestrina
ENSMICG00000015768	SMARCA1	100	98.299	ENSMLEG00000043198	SMARCA1	100	98.299	Mandrillus_leucophaeus
ENSMICG00000015768	SMARCA1	93	84.012	ENSMAMG00000014294	smarca5	95	83.434	Mastacembelus_armatus
ENSMICG00000015768	SMARCA1	93	84.012	ENSMZEG00005009369	smarca5	95	83.434	Maylandia_zebra
ENSMICG00000015768	SMARCA1	95	91.232	ENSMGAG00000007042	SMARCA1	100	91.232	Meleagris_gallopavo
ENSMICG00000015768	SMARCA1	98	95.511	ENSMAUG00000008133	Smarca1	97	96.105	Mesocricetus_auratus
ENSMICG00000015768	SMARCA1	100	94.450	ENSMOCG00000009464	Smarca1	98	95.302	Microtus_ochrogaster
ENSMICG00000015768	SMARCA1	94	81.414	ENSMMOG00000005547	smarca5	99	81.414	Mola_mola
ENSMICG00000015768	SMARCA1	98	90.019	ENSMODG00000013187	-	99	90.019	Monodelphis_domestica
ENSMICG00000015768	SMARCA1	92	83.640	ENSMALG00000002081	smarca5	97	83.230	Monopterus_albus
ENSMICG00000015768	SMARCA1	100	95.198	MGP_CAROLIEiJ_G0033034	Smarca1	98	95.681	Mus_caroli
ENSMICG00000015768	SMARCA1	100	95.198	ENSMUSG00000031099	Smarca1	98	95.681	Mus_musculus
ENSMICG00000015768	SMARCA1	100	95.198	MGP_PahariEiJ_G0031579	Smarca1	98	95.585	Mus_pahari
ENSMICG00000015768	SMARCA1	100	95.292	MGP_SPRETEiJ_G0034192	Smarca1	98	95.777	Mus_spretus
ENSMICG00000015768	SMARCA1	100	97.757	ENSMPUG00000017423	SMARCA1	95	97.757	Mustela_putorius_furo
ENSMICG00000015768	SMARCA1	100	94.304	ENSMLUG00000029614	SMARCA1	100	94.304	Myotis_lucifugus
ENSMICG00000015768	SMARCA1	98	96.848	ENSNGAG00000006492	Smarca1	99	96.848	Nannospalax_galili
ENSMICG00000015768	SMARCA1	93	84.114	ENSNBRG00000004463	smarca5	99	83.535	Neolamprologus_brichardi
ENSMICG00000015768	SMARCA1	100	97.383	ENSNLEG00000015179	SMARCA1	100	97.383	Nomascus_leucogenys
ENSMICG00000015768	SMARCA1	89	82.353	ENSMEUG00000008819	SMARCA1	100	82.353	Notamacropus_eugenii
ENSMICG00000015768	SMARCA1	98	96.367	ENSODEG00000012163	SMARCA1	99	96.367	Octodon_degus
ENSMICG00000015768	SMARCA1	93	84.114	ENSONIG00000009993	smarca5	95	83.669	Oreochromis_niloticus
ENSMICG00000015768	SMARCA1	92	93.930	ENSOANG00000002862	SMARCA1	100	93.930	Ornithorhynchus_anatinus
ENSMICG00000015768	SMARCA1	100	95.936	ENSOCUG00000001047	SMARCA1	100	95.936	Oryctolagus_cuniculus
ENSMICG00000015768	SMARCA1	92	83.947	ENSORLG00000021998	smarca5	96	82.189	Oryzias_latipes
ENSMICG00000015768	SMARCA1	95	81.962	ENSORLG00020017679	smarca5	97	82.289	Oryzias_latipes_hni
ENSMICG00000015768	SMARCA1	92	83.947	ENSORLG00015017210	smarca5	97	82.090	Oryzias_latipes_hsok
ENSMICG00000015768	SMARCA1	92	83.947	ENSOMEG00000000086	smarca5	97	82.090	Oryzias_melastigma
ENSMICG00000015768	SMARCA1	98	98.376	ENSOGAG00000004399	SMARCA1	99	98.376	Otolemur_garnettii
ENSMICG00000015768	SMARCA1	95	97.038	ENSOARG00000014638	SMARCA1	100	98.469	Ovis_aries
ENSMICG00000015768	SMARCA1	100	98.299	ENSPPAG00000034647	SMARCA1	100	98.299	Pan_paniscus
ENSMICG00000015768	SMARCA1	100	98.316	ENSPPRG00000008929	SMARCA1	100	98.316	Panthera_pardus
ENSMICG00000015768	SMARCA1	95	96.955	ENSPTIG00000000915	SMARCA1	98	96.955	Panthera_tigris_altaica
ENSMICG00000015768	SMARCA1	100	98.299	ENSPTRG00000049876	SMARCA1	100	98.224	Pan_troglodytes
ENSMICG00000015768	SMARCA1	100	98.299	ENSPANG00000003871	SMARCA1	100	98.299	Papio_anubis
ENSMICG00000015768	SMARCA1	89	87.012	ENSPKIG00000013411	smarca1	98	86.826	Paramormyrops_kingsleyae
ENSMICG00000015768	SMARCA1	95	92.004	ENSPSIG00000010101	SMARCA1	100	93.210	Pelodiscus_sinensis
ENSMICG00000015768	SMARCA1	98	96.084	ENSPEMG00000017503	Smarca1	97	96.689	Peromyscus_maniculatus_bairdii
ENSMICG00000015768	SMARCA1	95	92.408	ENSPCIG00000015460	SMARCA1	98	92.408	Phascolarctos_cinereus
ENSMICG00000015768	SMARCA1	92	84.049	ENSPFOG00000007649	smarca5	95	83.232	Poecilia_formosa
ENSMICG00000015768	SMARCA1	92	84.049	ENSPLAG00000003363	smarca5	95	83.232	Poecilia_latipinna
ENSMICG00000015768	SMARCA1	92	83.947	ENSPMEG00000019849	smarca5	95	83.131	Poecilia_mexicana
ENSMICG00000015768	SMARCA1	92	83.947	ENSPREG00000023250	smarca5	95	83.131	Poecilia_reticulata
ENSMICG00000015768	SMARCA1	100	94.486	ENSPPYG00000020703	SMARCA1	100	94.486	Pongo_abelii
ENSMICG00000015768	SMARCA1	77	89.189	ENSPCOG00000020722	SMARCA1	94	94.420	Propithecus_coquereli
ENSMICG00000015768	SMARCA1	92	97.683	ENSPVAG00000003805	SMARCA1	94	97.683	Pteropus_vampyrus
ENSMICG00000015768	SMARCA1	56	85.205	ENSPNYG00000012299	smarca5	92	84.000	Pundamilia_nyererei
ENSMICG00000015768	SMARCA1	100	95.743	ENSRNOG00000003762	Smarca1	98	96.143	Rattus_norvegicus
ENSMICG00000015768	SMARCA1	100	98.204	ENSRROG00000034167	SMARCA1	100	98.204	Rhinopithecus_roxellana
ENSMICG00000015768	SMARCA1	95	98.715	ENSSBOG00000020641	SMARCA1	100	99.184	Saimiri_boliviensis_boliviensis
ENSMICG00000015768	SMARCA1	92	86.639	ENSSHAG00000013518	SMARCA1	99	86.639	Sarcophilus_harrisii
ENSMICG00000015768	SMARCA1	96	81.441	ENSSFOG00015016794	smarca5	100	83.814	Scleropages_formosus
ENSMICG00000015768	SMARCA1	98	85.783	ENSSFOG00015009043	smarca1	99	85.783	Scleropages_formosus
ENSMICG00000015768	SMARCA1	93	82.776	ENSSMAG00000004801	smarca5	95	82.776	Scophthalmus_maximus
ENSMICG00000015768	SMARCA1	93	83.503	ENSSDUG00000020690	smarca5	96	82.929	Seriola_dumerili
ENSMICG00000015768	SMARCA1	93	83.503	ENSSLDG00000025190	smarca5	96	82.929	Seriola_lalandi_dorsalis
ENSMICG00000015768	SMARCA1	85	90.642	ENSSARG00000000842	SMARCA1	92	90.642	Sorex_araneus
ENSMICG00000015768	SMARCA1	95	90.637	ENSSPUG00000000590	SMARCA1	95	92.331	Sphenodon_punctatus
ENSMICG00000015768	SMARCA1	93	83.605	ENSSPAG00000002894	smarca5	97	84.245	Stegastes_partitus
ENSMICG00000015768	SMARCA1	98	97.303	ENSSSCG00000012649	SMARCA1	99	97.303	Sus_scrofa
ENSMICG00000015768	SMARCA1	93	92.668	ENSTGUG00000003899	-	100	92.668	Taeniopygia_guttata
ENSMICG00000015768	SMARCA1	93	83.707	ENSTRUG00000014094	smarca5	95	83.131	Takifugu_rubripes
ENSMICG00000015768	SMARCA1	92	82.684	ENSTNIG00000017717	smarca5	94	81.818	Tetraodon_nigroviridis
ENSMICG00000015768	SMARCA1	93	91.304	ENSTBEG00000014973	SMARCA1	99	91.304	Tupaia_belangeri
ENSMICG00000015768	SMARCA1	92	95.320	ENSTTRG00000006168	SMARCA1	99	95.320	Tursiops_truncatus
ENSMICG00000015768	SMARCA1	100	97.543	ENSUAMG00000020201	SMARCA1	100	97.543	Ursus_americanus
ENSMICG00000015768	SMARCA1	95	93.707	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSMICG00000015768	SMARCA1	77	99.351	ENSVPAG00000010492	-	85	99.351	Vicugna_pacos
ENSMICG00000015768	SMARCA1	95	99.100	ENSVVUG00000008878	SMARCA1	99	99.269	Vulpes_vulpes
ENSMICG00000015768	SMARCA1	94	89.558	ENSXETG00000001526	smarca1	99	89.558	Xenopus_tropicalis
ENSMICG00000015768	SMARCA1	93	83.707	ENSXCOG00000011170	smarca5	98	83.131	Xiphophorus_couchianus
ENSMICG00000015768	SMARCA1	93	83.707	ENSXMAG00000009678	smarca5	97	85.307	Xiphophorus_maculatus