EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000015979 (Gene tree)
Gene ID: 105875360
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 7942 bases
Position: chr5:116434710-116442651
Accession: 105875360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000041380	PseudoU_synth_2	PF00849.22	3.2e-32	1	1
ENSMICP00000014559	PseudoU_synth_2	PF00849.22	5.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000067945	RPUSD4-202	1358	XM_012772338	ENSMICP00000041380	332 (aa)	XP_012627792	UPI000643D20A
ENSMICT00000015970	RPUSD4-201	1437	XM_012772336	ENSMICP00000014559	377 (aa)	XP_012627790	UPI00064373D8

Gene Model

Click here to download ENSMICG00000015979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015979	RPUSD4	100	82.759	ENSG00000165526	RPUSD4	100	82.759	Homo_sapiens
ENSMICG00000015979	RPUSD4	97	52.147	ENSAPOG00000011024	rpusd4	85	51.917	Acanthochromis_polyacanthus
ENSMICG00000015979	RPUSD4	88	84.553	ENSAMEG00000005953	-	97	84.553	Ailuropoda_melanoleuca
ENSMICG00000015979	RPUSD4	98	83.827	ENSAMEG00000000127	-	98	83.827	Ailuropoda_melanoleuca
ENSMICG00000015979	RPUSD4	89	52.508	ENSACIG00000003533	rpusd4	97	49.249	Amphilophus_citrinellus
ENSMICG00000015979	RPUSD4	97	52.147	ENSAOCG00000015409	rpusd4	84	52.059	Amphiprion_ocellaris
ENSMICG00000015979	RPUSD4	97	52.454	ENSAPEG00000018935	rpusd4	84	52.353	Amphiprion_percula
ENSMICG00000015979	RPUSD4	89	54.305	ENSATEG00000008059	rpusd4	84	51.176	Anabas_testudineus
ENSMICG00000015979	RPUSD4	83	60.932	ENSAPLG00000013250	RPUSD4	99	60.000	Anas_platyrhynchos
ENSMICG00000015979	RPUSD4	97	59.511	ENSACAG00000000189	RPUSD4	100	59.511	Anolis_carolinensis
ENSMICG00000015979	RPUSD4	99	83.065	ENSANAG00000024050	RPUSD4	100	83.065	Aotus_nancymaae
ENSMICG00000015979	RPUSD4	89	54.305	ENSACLG00000020996	rpusd4	86	50.737	Astatotilapia_calliptera
ENSMICG00000015979	RPUSD4	89	53.000	ENSAMXG00000031479	rpusd4	95	49.852	Astyanax_mexicanus
ENSMICG00000015979	RPUSD4	100	79.894	ENSBTAG00000020900	RPUSD4	100	79.894	Bos_taurus
ENSMICG00000015979	RPUSD4	98	82.703	ENSCJAG00000042850	RPUSD4	93	82.703	Callithrix_jacchus
ENSMICG00000015979	RPUSD4	100	82.804	ENSCAFG00000010488	RPUSD4	100	82.804	Canis_familiaris
ENSMICG00000015979	RPUSD4	100	82.804	ENSCAFG00020010621	RPUSD4	100	82.804	Canis_lupus_dingo
ENSMICG00000015979	RPUSD4	100	80.211	ENSCHIG00000009975	RPUSD4	100	80.211	Capra_hircus
ENSMICG00000015979	RPUSD4	100	87.268	ENSTSYG00000008456	RPUSD4	100	87.268	Carlito_syrichta
ENSMICG00000015979	RPUSD4	78	81.008	ENSCAPG00000006040	RPUSD4	100	81.008	Cavia_aperea
ENSMICG00000015979	RPUSD4	100	81.432	ENSCPOG00000014971	RPUSD4	100	81.432	Cavia_porcellus
ENSMICG00000015979	RPUSD4	99	83.333	ENSCCAG00000027838	RPUSD4	100	83.333	Cebus_capucinus
ENSMICG00000015979	RPUSD4	100	83.024	ENSCATG00000041570	RPUSD4	100	83.024	Cercocebus_atys
ENSMICG00000015979	RPUSD4	100	84.085	ENSCLAG00000016553	RPUSD4	100	84.085	Chinchilla_lanigera
ENSMICG00000015979	RPUSD4	100	82.759	ENSCSAG00000002274	RPUSD4	100	82.759	Chlorocebus_sabaeus
ENSMICG00000015979	RPUSD4	85	85.159	ENSCHOG00000010249	RPUSD4	100	85.159	Choloepus_hoffmanni
ENSMICG00000015979	RPUSD4	86	67.474	ENSCPBG00000011175	RPUSD4	99	67.474	Chrysemys_picta_bellii
ENSMICG00000015979	RPUSD4	81	42.086	ENSCSAVG00000000872	-	54	42.086	Ciona_savignyi
ENSMICG00000015979	RPUSD4	100	81.963	ENSCANG00000039684	RPUSD4	100	81.963	Colobus_angolensis_palliatus
ENSMICG00000015979	RPUSD4	95	86.624	ENSCGRG00001024141	Rpusd4	100	81.432	Cricetulus_griseus_chok1gshd
ENSMICG00000015979	RPUSD4	95	86.624	ENSCGRG00000014415	Rpusd4	100	81.432	Cricetulus_griseus_crigri
ENSMICG00000015979	RPUSD4	97	51.227	ENSCVAG00000000392	rpusd4	95	50.445	Cyprinodon_variegatus
ENSMICG00000015979	RPUSD4	97	50.920	ENSCVAG00000008761	rpusd4	86	50.148	Cyprinodon_variegatus
ENSMICG00000015979	RPUSD4	91	50.329	ENSDARG00000012674	rpusd4	91	49.538	Danio_rerio
ENSMICG00000015979	RPUSD4	100	79.576	ENSDNOG00000020026	RPUSD4	100	79.576	Dasypus_novemcinctus
ENSMICG00000015979	RPUSD4	95	85.987	ENSDORG00000016717	Rpusd4	100	80.902	Dipodomys_ordii
ENSMICG00000015979	RPUSD4	99	80.749	ENSETEG00000013953	RPUSD4	99	80.749	Echinops_telfairi
ENSMICG00000015979	RPUSD4	100	85.411	ENSEASG00005022982	RPUSD4	100	85.411	Equus_asinus_asinus
ENSMICG00000015979	RPUSD4	100	85.146	ENSECAG00000000557	RPUSD4	100	85.146	Equus_caballus
ENSMICG00000015979	RPUSD4	82	82.632	ENSEEUG00000014036	RPUSD4	82	82.632	Erinaceus_europaeus
ENSMICG00000015979	RPUSD4	97	54.128	ENSELUG00000008075	rpusd4	99	51.323	Esox_lucius
ENSMICG00000015979	RPUSD4	100	83.289	ENSFCAG00000029789	RPUSD4	100	83.289	Felis_catus
ENSMICG00000015979	RPUSD4	89	61.409	ENSFALG00000005171	RPUSD4	98	58.258	Ficedula_albicollis
ENSMICG00000015979	RPUSD4	100	83.024	ENSFDAG00000014307	RPUSD4	100	83.024	Fukomys_damarensis
ENSMICG00000015979	RPUSD4	90	54.125	ENSFHEG00000004329	rpusd4	87	52.059	Fundulus_heteroclitus
ENSMICG00000015979	RPUSD4	89	51.667	ENSGMOG00000017726	rpusd4	96	50.769	Gadus_morhua
ENSMICG00000015979	RPUSD4	84	62.766	ENSGALG00000024326	RPUSD4	95	57.817	Gallus_gallus
ENSMICG00000015979	RPUSD4	90	50.987	ENSGAFG00000021559	rpusd4	85	48.083	Gambusia_affinis
ENSMICG00000015979	RPUSD4	88	53.199	ENSGACG00000001657	rpusd4	97	51.786	Gasterosteus_aculeatus
ENSMICG00000015979	RPUSD4	90	66.777	ENSGAGG00000000132	RPUSD4	99	60.942	Gopherus_agassizii
ENSMICG00000015979	RPUSD4	100	81.963	ENSGGOG00000016494	RPUSD4	100	81.963	Gorilla_gorilla
ENSMICG00000015979	RPUSD4	89	54.305	ENSHBUG00000022838	rpusd4	86	50.737	Haplochromis_burtoni
ENSMICG00000015979	RPUSD4	100	82.493	ENSHGLG00000002285	RPUSD4	100	82.493	Heterocephalus_glaber_female
ENSMICG00000015979	RPUSD4	100	82.493	ENSHGLG00100006385	RPUSD4	100	82.493	Heterocephalus_glaber_male
ENSMICG00000015979	RPUSD4	90	53.289	ENSHCOG00000006612	rpusd4	84	51.360	Hippocampus_comes
ENSMICG00000015979	RPUSD4	90	54.785	ENSIPUG00000023879	rusd4	85	53.049	Ictalurus_punctatus
ENSMICG00000015979	RPUSD4	97	84.341	ENSSTOG00000025280	RPUSD4	100	84.341	Ictidomys_tridecemlineatus
ENSMICG00000015979	RPUSD4	99	82.258	ENSJJAG00000018673	Rpusd4	100	82.258	Jaculus_jaculus
ENSMICG00000015979	RPUSD4	89	55.960	ENSKMAG00000021805	rpusd4	88	51.917	Kryptolebias_marmoratus
ENSMICG00000015979	RPUSD4	89	54.485	ENSLBEG00000020394	rpusd4	94	52.226	Labrus_bergylta
ENSMICG00000015979	RPUSD4	90	66.667	ENSLACG00000011028	RPUSD4	82	63.889	Latimeria_chalumnae
ENSMICG00000015979	RPUSD4	94	48.056	ENSLOCG00000003124	rpusd4	95	48.056	Lepisosteus_oculatus
ENSMICG00000015979	RPUSD4	100	83.069	ENSLAFG00000005211	RPUSD4	100	83.069	Loxodonta_africana
ENSMICG00000015979	RPUSD4	100	83.289	ENSMFAG00000039513	RPUSD4	100	83.289	Macaca_fascicularis
ENSMICG00000015979	RPUSD4	100	83.024	ENSMMUG00000007933	RPUSD4	100	83.024	Macaca_mulatta
ENSMICG00000015979	RPUSD4	100	83.024	ENSMNEG00000027414	RPUSD4	100	83.024	Macaca_nemestrina
ENSMICG00000015979	RPUSD4	100	83.024	ENSMLEG00000042461	RPUSD4	100	83.024	Mandrillus_leucophaeus
ENSMICG00000015979	RPUSD4	97	50.307	ENSMAMG00000023839	rpusd4	86	51.045	Mastacembelus_armatus
ENSMICG00000015979	RPUSD4	89	54.305	ENSMZEG00005011999	rpusd4	86	50.737	Maylandia_zebra
ENSMICG00000015979	RPUSD4	84	61.071	ENSMGAG00000000840	RPUSD4	99	58.951	Meleagris_gallopavo
ENSMICG00000015979	RPUSD4	100	81.432	ENSMAUG00000010280	Rpusd4	100	81.432	Mesocricetus_auratus
ENSMICG00000015979	RPUSD4	99	78.495	ENSMOCG00000000661	Rpusd4	99	78.495	Microtus_ochrogaster
ENSMICG00000015979	RPUSD4	89	55.184	ENSMMOG00000021731	rpusd4	93	53.503	Mola_mola
ENSMICG00000015979	RPUSD4	85	79.359	ENSMODG00000004521	RPUSD4	89	72.046	Monodelphis_domestica
ENSMICG00000015979	RPUSD4	89	56.291	ENSMALG00000005839	rpusd4	97	54.489	Monopterus_albus
ENSMICG00000015979	RPUSD4	95	85.032	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.310	Mus_caroli
ENSMICG00000015979	RPUSD4	94	85.531	ENSMUSG00000032044	Rpusd4	99	79.412	Mus_musculus
ENSMICG00000015979	RPUSD4	95	85.669	MGP_PahariEiJ_G0014819	Rpusd4	100	80.371	Mus_pahari
ENSMICG00000015979	RPUSD4	94	86.174	MGP_SPRETEiJ_G0033078	Rpusd4	99	79.679	Mus_spretus
ENSMICG00000015979	RPUSD4	98	81.671	ENSMPUG00000006608	RPUSD4	99	81.671	Mustela_putorius_furo
ENSMICG00000015979	RPUSD4	77	85.039	ENSMLUG00000029348	-	100	85.039	Myotis_lucifugus
ENSMICG00000015979	RPUSD4	99	82.667	ENSMLUG00000017328	-	98	82.667	Myotis_lucifugus
ENSMICG00000015979	RPUSD4	93	87.338	ENSNGAG00000020847	Rpusd4	98	81.671	Nannospalax_galili
ENSMICG00000015979	RPUSD4	89	54.636	ENSNBRG00000005207	rpusd4	95	51.976	Neolamprologus_brichardi
ENSMICG00000015979	RPUSD4	100	83.289	ENSNLEG00000007465	RPUSD4	100	83.289	Nomascus_leucogenys
ENSMICG00000015979	RPUSD4	92	75.329	ENSMEUG00000004370	RPUSD4	99	68.919	Notamacropus_eugenii
ENSMICG00000015979	RPUSD4	70	62.264	ENSOPRG00000013141	-	100	62.264	Ochotona_princeps
ENSMICG00000015979	RPUSD4	100	81.963	ENSODEG00000004577	RPUSD4	100	81.963	Octodon_degus
ENSMICG00000015979	RPUSD4	89	53.974	ENSONIG00000018879	rpusd4	93	50.000	Oreochromis_niloticus
ENSMICG00000015979	RPUSD4	88	69.492	ENSOANG00000007247	RPUSD4	95	69.360	Ornithorhynchus_anatinus
ENSMICG00000015979	RPUSD4	97	87.926	ENSOCUG00000017039	RPUSD4	99	85.561	Oryctolagus_cuniculus
ENSMICG00000015979	RPUSD4	90	53.465	ENSORLG00000002750	rpusd4	93	50.000	Oryzias_latipes
ENSMICG00000015979	RPUSD4	90	53.135	ENSORLG00020002044	rpusd4	82	50.599	Oryzias_latipes_hni
ENSMICG00000015979	RPUSD4	90	53.465	ENSORLG00015020034	rpusd4	82	50.599	Oryzias_latipes_hsok
ENSMICG00000015979	RPUSD4	90	55.082	ENSOMEG00000004861	rpusd4	82	52.083	Oryzias_melastigma
ENSMICG00000015979	RPUSD4	100	84.127	ENSOGAG00000008922	RPUSD4	100	84.127	Otolemur_garnettii
ENSMICG00000015979	RPUSD4	98	80.541	ENSOARG00000012238	RPUSD4	99	79.630	Ovis_aries
ENSMICG00000015979	RPUSD4	100	83.024	ENSPPAG00000042883	RPUSD4	93	83.024	Pan_paniscus
ENSMICG00000015979	RPUSD4	100	83.024	ENSPPRG00000003081	RPUSD4	100	83.024	Panthera_pardus
ENSMICG00000015979	RPUSD4	100	83.024	ENSPTIG00000012059	RPUSD4	100	83.024	Panthera_tigris_altaica
ENSMICG00000015979	RPUSD4	100	82.759	ENSPTRG00000004454	RPUSD4	100	82.759	Pan_troglodytes
ENSMICG00000015979	RPUSD4	100	83.024	ENSPANG00000015040	RPUSD4	100	83.024	Papio_anubis
ENSMICG00000015979	RPUSD4	90	60.066	ENSPKIG00000023986	rpusd4	85	57.910	Paramormyrops_kingsleyae
ENSMICG00000015979	RPUSD4	89	66.443	ENSPSIG00000014268	RPUSD4	95	66.443	Pelodiscus_sinensis
ENSMICG00000015979	RPUSD4	89	51.495	ENSPMGG00000002806	rpusd4	91	49.695	Periophthalmus_magnuspinnatus
ENSMICG00000015979	RPUSD4	100	74.005	ENSPEMG00000000278	Rpusd4	100	74.005	Peromyscus_maniculatus_bairdii
ENSMICG00000015979	RPUSD4	92	43.917	ENSPMAG00000008183	rpusd4	97	44.179	Petromyzon_marinus
ENSMICG00000015979	RPUSD4	97	71.703	ENSPCIG00000010212	RPUSD4	100	71.703	Phascolarctos_cinereus
ENSMICG00000015979	RPUSD4	90	52.941	ENSPFOG00000019030	rpusd4	90	49.138	Poecilia_formosa
ENSMICG00000015979	RPUSD4	90	53.618	ENSPLAG00000016848	rpusd4	87	49.711	Poecilia_latipinna
ENSMICG00000015979	RPUSD4	90	52.303	ENSPMEG00000017534	rpusd4	82	49.693	Poecilia_mexicana
ENSMICG00000015979	RPUSD4	84	54.064	ENSPREG00000005689	rpusd4	83	50.617	Poecilia_reticulata
ENSMICG00000015979	RPUSD4	100	83.820	ENSPPYG00000004043	RPUSD4	100	83.820	Pongo_abelii
ENSMICG00000015979	RPUSD4	72	94.545	ENSPCAG00000000753	RPUSD4	81	80.978	Procavia_capensis
ENSMICG00000015979	RPUSD4	98	85.445	ENSPCOG00000020694	RPUSD4	100	85.445	Propithecus_coquereli
ENSMICG00000015979	RPUSD4	100	83.024	ENSPVAG00000000988	RPUSD4	100	83.024	Pteropus_vampyrus
ENSMICG00000015979	RPUSD4	89	52.980	ENSPNYG00000009652	rpusd4	86	49.558	Pundamilia_nyererei
ENSMICG00000015979	RPUSD4	90	53.135	ENSPNAG00000012264	rpusd4	88	51.198	Pygocentrus_nattereri
ENSMICG00000015979	RPUSD4	94	86.174	ENSRNOG00000011567	Rpusd4	99	80.749	Rattus_norvegicus
ENSMICG00000015979	RPUSD4	100	83.289	ENSRBIG00000034842	RPUSD4	100	83.289	Rhinopithecus_bieti
ENSMICG00000015979	RPUSD4	100	83.289	ENSRROG00000039753	RPUSD4	100	83.289	Rhinopithecus_roxellana
ENSMICG00000015979	RPUSD4	99	82.258	ENSSBOG00000030413	RPUSD4	100	82.258	Saimiri_boliviensis_boliviensis
ENSMICG00000015979	RPUSD4	90	77.517	ENSSHAG00000008304	RPUSD4	99	77.517	Sarcophilus_harrisii
ENSMICG00000015979	RPUSD4	89	59.667	ENSSFOG00015006203	rpusd4	92	55.457	Scleropages_formosus
ENSMICG00000015979	RPUSD4	90	54.426	ENSSMAG00000020978	rpusd4	88	50.729	Scophthalmus_maximus
ENSMICG00000015979	RPUSD4	89	53.512	ENSSDUG00000013399	rpusd4	84	51.875	Seriola_dumerili
ENSMICG00000015979	RPUSD4	89	53.512	ENSSLDG00000023507	rpusd4	84	51.875	Seriola_lalandi_dorsalis
ENSMICG00000015979	RPUSD4	90	66.667	ENSSPUG00000001401	RPUSD4	93	62.426	Sphenodon_punctatus
ENSMICG00000015979	RPUSD4	90	55.776	ENSSPAG00000012163	rpusd4	87	53.216	Stegastes_partitus
ENSMICG00000015979	RPUSD4	100	84.085	ENSSSCG00000015233	RPUSD4	100	84.085	Sus_scrofa
ENSMICG00000015979	RPUSD4	89	61.616	ENSTGUG00000000773	RPUSD4	99	61.616	Taeniopygia_guttata
ENSMICG00000015979	RPUSD4	89	53.488	ENSTRUG00000012283	rpusd4	85	51.343	Takifugu_rubripes
ENSMICG00000015979	RPUSD4	89	53.156	ENSTNIG00000014676	rpusd4	84	50.606	Tetraodon_nigroviridis
ENSMICG00000015979	RPUSD4	100	81.432	ENSTTRG00000001555	RPUSD4	100	81.432	Tursiops_truncatus
ENSMICG00000015979	RPUSD4	98	83.558	ENSUMAG00000002219	RPUSD4	98	83.558	Ursus_maritimus
ENSMICG00000015979	RPUSD4	70	86.038	ENSVPAG00000001066	RPUSD4	100	86.038	Vicugna_pacos
ENSMICG00000015979	RPUSD4	100	82.540	ENSVVUG00000020101	RPUSD4	100	82.540	Vulpes_vulpes
ENSMICG00000015979	RPUSD4	90	52.961	ENSXCOG00000004676	rpusd4	87	49.558	Xiphophorus_couchianus
ENSMICG00000015979	RPUSD4	90	52.961	ENSXMAG00000023351	rpusd4	85	49.853	Xiphophorus_maculatus