EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000015983 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4044 bases
Position: chr10:34019965-34024008
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000042130	LSM	PF01423.22	6.8e-14	1	1
ENSMICP00000033297	LSM	PF01423.22	8.2e-14	1	1
ENSMICP00000042560	LSM	PF01423.22	8.5e-14	1	1
ENSMICP00000045352	LSM	PF01423.22	9.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000059641	-	795	-	ENSMICP00000042560	264 (aa)	-	UPI000C2EC898
ENSMICT00000015975	-	720	-	ENSMICP00000033297	239 (aa)	-	UPI000C2ED732
ENSMICT00000060685	-	768	-	ENSMICP00000045352	255 (aa)	-	UPI000C2EC5C4
ENSMICT00000059798	-	657	-	ENSMICP00000042130	218 (aa)	-	UPI000C2EAAC2

Gene Model

Click here to download ENSMICG00000015983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000015983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000015983	-	87	90.476	ENSMICG00000016519	SNRPB	97	85.778
ENSMICG00000015983	-	95	83.575	ENSMICG00000042356	SNRPN	99	76.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000015983	-	87	89.947	ENSG00000125835	SNRPB	97	85.333	Homo_sapiens
ENSMICG00000015983	-	83	82.873	ENSAPOG00000019606	snrpb	61	83.978	Acanthochromis_polyacanthus
ENSMICG00000015983	-	86	89.894	ENSAMEG00000011353	SNRPB	98	82.700	Ailuropoda_melanoleuca
ENSMICG00000015983	-	80	82.286	ENSACIG00000014480	snrpb	76	83.429	Amphilophus_citrinellus
ENSMICG00000015983	-	83	82.320	ENSAOCG00000006876	snrpb	74	83.978	Amphiprion_ocellaris
ENSMICG00000015983	-	83	82.873	ENSAPEG00000021585	snrpb	76	83.978	Amphiprion_percula
ENSMICG00000015983	-	83	83.425	ENSATEG00000009836	snrpb	74	83.978	Anabas_testudineus
ENSMICG00000015983	-	83	85.556	ENSACAG00000002053	SNRPB	99	78.603	Anolis_carolinensis
ENSMICG00000015983	-	95	85.507	ENSANAG00000036271	-	84	80.889	Aotus_nancymaae
ENSMICG00000015983	-	87	89.947	ENSANAG00000024443	-	97	85.333	Aotus_nancymaae
ENSMICG00000015983	-	83	82.320	ENSACLG00000014707	snrpb	74	83.978	Astatotilapia_calliptera
ENSMICG00000015983	-	77	83.060	ENSAMXG00000029434	snrpb	76	84.530	Astyanax_mexicanus
ENSMICG00000015983	-	98	83.051	ENSBTAG00000001038	SNRPB	97	85.778	Bos_taurus
ENSMICG00000015983	-	95	85.024	ENSCJAG00000023097	-	79	85.185	Callithrix_jacchus
ENSMICG00000015983	-	87	89.947	ENSCJAG00000020971	-	97	85.333	Callithrix_jacchus
ENSMICG00000015983	-	87	89.947	ENSCAFG00000006693	-	97	85.333	Canis_familiaris
ENSMICG00000015983	-	86	80.000	ENSCAFG00000031109	-	87	69.196	Canis_familiaris
ENSMICG00000015983	-	87	89.947	ENSCAFG00020016981	-	99	82.773	Canis_lupus_dingo
ENSMICG00000015983	-	87	90.476	ENSCHIG00000025449	-	97	85.778	Capra_hircus
ENSMICG00000015983	-	84	66.120	ENSTSYG00000032303	-	86	65.801	Carlito_syrichta
ENSMICG00000015983	-	87	89.947	ENSTSYG00000014498	-	97	85.333	Carlito_syrichta
ENSMICG00000015983	-	86	89.894	ENSCAPG00000012669	SNRPB	97	85.268	Cavia_aperea
ENSMICG00000015983	-	87	89.947	ENSCPOG00000039408	SNRPB	97	85.333	Cavia_porcellus
ENSMICG00000015983	-	87	89.947	ENSCCAG00000026002	SNRPB	97	85.333	Cebus_capucinus
ENSMICG00000015983	-	58	81.102	ENSCCAG00000035140	-	89	74.510	Cebus_capucinus
ENSMICG00000015983	-	87	89.947	ENSCATG00000030230	SNRPB	97	85.333	Cercocebus_atys
ENSMICG00000015983	-	87	89.947	ENSCLAG00000012442	SNRPB	97	84.348	Chinchilla_lanigera
ENSMICG00000015983	-	87	89.947	ENSCSAG00000010840	SNRPB	97	85.333	Chlorocebus_sabaeus
ENSMICG00000015983	-	87	86.772	ENSCPBG00000026801	SNRPB	94	82.222	Chrysemys_picta_bellii
ENSMICG00000015983	-	87	89.947	ENSCANG00000019461	SNRPB	97	85.333	Colobus_angolensis_palliatus
ENSMICG00000015983	-	87	89.947	ENSCGRG00001023046	Snrpb	97	85.333	Cricetulus_griseus_chok1gshd
ENSMICG00000015983	-	83	90.000	ENSCGRG00000010423	Snrpb	96	85.185	Cricetulus_griseus_crigri
ENSMICG00000015983	-	84	82.514	ENSCSEG00000020328	snrpb	75	83.978	Cynoglossus_semilaevis
ENSMICG00000015983	-	77	83.333	ENSDARG00000011125	snrpb	75	84.530	Danio_rerio
ENSMICG00000015983	-	87	89.947	ENSDNOG00000015545	-	99	82.773	Dasypus_novemcinctus
ENSMICG00000015983	-	87	85.714	ENSDNOG00000007896	-	98	79.412	Dasypus_novemcinctus
ENSMICG00000015983	-	84	90.164	ENSDORG00000029558	Snrpb	99	83.772	Dipodomys_ordii
ENSMICG00000015983	-	84	56.831	FBgn0262601	SmB	74	62.416	Drosophila_melanogaster
ENSMICG00000015983	-	84	72.678	ENSETEG00000006830	SNRPB	79	72.376	Echinops_telfairi
ENSMICG00000015983	-	83	72.581	ENSEBUG00000007467	SNRPB	75	71.505	Eptatretus_burgeri
ENSMICG00000015983	-	87	89.418	ENSEASG00005012991	SNRPB	97	84.889	Equus_asinus_asinus
ENSMICG00000015983	-	87	89.947	ENSECAG00000011944	SNRPB	97	85.333	Equus_caballus
ENSMICG00000015983	-	87	89.947	ENSEEUG00000015568	SNRPB	81	83.913	Erinaceus_europaeus
ENSMICG00000015983	-	67	85.517	ENSELUG00000014564	snrpb	76	82.857	Esox_lucius
ENSMICG00000015983	-	87	89.947	ENSFCAG00000034090	-	97	85.333	Felis_catus
ENSMICG00000015983	-	83	86.111	ENSFALG00000004866	SNRPB	93	81.481	Ficedula_albicollis
ENSMICG00000015983	-	87	89.947	ENSFDAG00000009937	SNRPB	97	85.333	Fukomys_damarensis
ENSMICG00000015983	-	87	86.243	ENSGALG00000035421	SNRPN	94	81.778	Gallus_gallus
ENSMICG00000015983	-	78	83.041	ENSGAFG00000019558	snrpb	78	82.778	Gambusia_affinis
ENSMICG00000015983	-	84	81.421	ENSGACG00000003262	snrpb	75	82.873	Gasterosteus_aculeatus
ENSMICG00000015983	-	87	86.772	ENSGAGG00000001308	SNRPB	94	82.222	Gopherus_agassizii
ENSMICG00000015983	-	87	89.947	ENSGGOG00000016138	SNRPB	97	85.333	Gorilla_gorilla
ENSMICG00000015983	-	83	82.320	ENSHBUG00000008369	snrpb	74	83.978	Haplochromis_burtoni
ENSMICG00000015983	-	87	89.947	ENSHGLG00000016241	-	97	85.333	Heterocephalus_glaber_female
ENSMICG00000015983	-	69	84.000	ENSHGLG00000016505	-	85	82.222	Heterocephalus_glaber_female
ENSMICG00000015983	-	69	84.000	ENSHGLG00100004178	-	85	82.222	Heterocephalus_glaber_male
ENSMICG00000015983	-	87	89.947	ENSHGLG00100012877	-	97	85.333	Heterocephalus_glaber_male
ENSMICG00000015983	-	84	82.514	ENSHCOG00000014888	snrpb	75	83.978	Hippocampus_comes
ENSMICG00000015983	-	77	83.333	ENSIPUG00000024569	SNRPB	75	84.530	Ictalurus_punctatus
ENSMICG00000015983	-	95	88.889	ENSSTOG00000033664	-	99	81.513	Ictidomys_tridecemlineatus
ENSMICG00000015983	-	72	78.846	ENSSTOG00000027821	-	62	88.235	Ictidomys_tridecemlineatus
ENSMICG00000015983	-	87	89.947	ENSJJAG00000024170	Snrpb	97	85.333	Jaculus_jaculus
ENSMICG00000015983	-	79	84.302	ENSKMAG00000014494	snrpb	73	83.978	Kryptolebias_marmoratus
ENSMICG00000015983	-	84	82.514	ENSLBEG00000005678	snrpb	75	83.978	Labrus_bergylta
ENSMICG00000015983	-	87	83.069	ENSLACG00000011459	SNRPB	99	76.891	Latimeria_chalumnae
ENSMICG00000015983	-	77	83.929	ENSLOCG00000002687	snrpb	75	85.083	Lepisosteus_oculatus
ENSMICG00000015983	-	86	87.234	ENSLAFG00000017588	SNRPB	97	83.036	Loxodonta_africana
ENSMICG00000015983	-	87	89.947	ENSMFAG00000038756	SNRPB	97	85.333	Macaca_fascicularis
ENSMICG00000015983	-	87	89.947	ENSMMUG00000010050	SNRPB	97	85.333	Macaca_mulatta
ENSMICG00000015983	-	87	89.947	ENSMNEG00000027954	SNRPB	97	85.333	Macaca_nemestrina
ENSMICG00000015983	-	87	89.947	ENSMLEG00000022346	SNRPB	97	85.333	Mandrillus_leucophaeus
ENSMICG00000015983	-	83	82.222	ENSMAMG00000009294	snrpb	72	83.889	Mastacembelus_armatus
ENSMICG00000015983	-	83	82.320	ENSMZEG00005011856	snrpb	74	83.978	Maylandia_zebra
ENSMICG00000015983	-	87	89.418	ENSMOCG00000002892	-	97	84.889	Microtus_ochrogaster
ENSMICG00000015983	-	64	74.820	ENSMOCG00000021362	-	75	71.823	Microtus_ochrogaster
ENSMICG00000015983	-	83	82.418	ENSMMOG00000013226	snrpb	76	83.889	Mola_mola
ENSMICG00000015983	-	83	82.320	ENSMALG00000020839	snrpb	60	83.425	Monopterus_albus
ENSMICG00000015983	-	87	89.947	MGP_CAROLIEiJ_G0024293	Snrpb	97	84.889	Mus_caroli
ENSMICG00000015983	-	87	89.947	ENSMUSG00000027404	Snrpb	97	84.889	Mus_musculus
ENSMICG00000015983	-	87	89.947	MGP_PahariEiJ_G0025738	Snrpb	97	84.889	Mus_pahari
ENSMICG00000015983	-	87	89.947	MGP_SPRETEiJ_G0025213	Snrpb	97	84.889	Mus_spretus
ENSMICG00000015983	-	87	89.947	ENSMPUG00000009283	SNRPB	97	85.333	Mustela_putorius_furo
ENSMICG00000015983	-	85	87.097	ENSMLUG00000016951	SNRPB	99	80.672	Myotis_lucifugus
ENSMICG00000015983	-	87	89.947	ENSNGAG00000012051	Snrpb	97	85.333	Nannospalax_galili
ENSMICG00000015983	-	81	81.356	ENSNBRG00000006353	snrpb	67	82.486	Neolamprologus_brichardi
ENSMICG00000015983	-	87	89.947	ENSNLEG00000029067	SNRPB	99	82.773	Nomascus_leucogenys
ENSMICG00000015983	-	83	88.462	ENSMEUG00000015625	SNRPB	81	88.462	Notamacropus_eugenii
ENSMICG00000015983	-	87	89.947	ENSODEG00000004305	-	97	85.333	Octodon_degus
ENSMICG00000015983	-	77	85.119	ENSODEG00000016060	-	76	86.740	Octodon_degus
ENSMICG00000015983	-	83	82.320	ENSONIG00000000248	snrpb	74	83.978	Oreochromis_niloticus
ENSMICG00000015983	-	94	86.408	ENSOCUG00000021456	-	78	86.772	Oryctolagus_cuniculus
ENSMICG00000015983	-	78	87.719	ENSOCUG00000022423	-	88	87.719	Oryctolagus_cuniculus
ENSMICG00000015983	-	95	88.889	ENSOCUG00000028215	-	99	81.513	Oryctolagus_cuniculus
ENSMICG00000015983	-	94	67.647	ENSOCUG00000026813	-	77	66.480	Oryctolagus_cuniculus
ENSMICG00000015983	-	85	90.323	ENSOCUG00000014042	-	99	83.193	Oryctolagus_cuniculus
ENSMICG00000015983	-	83	82.320	ENSORLG00000021862	snrpb	74	83.425	Oryzias_latipes
ENSMICG00000015983	-	87	89.947	ENSOGAG00000016149	SNRPB	99	82.773	Otolemur_garnettii
ENSMICG00000015983	-	87	90.476	ENSOARG00000006740	SNRPB	97	85.778	Ovis_aries
ENSMICG00000015983	-	87	89.947	ENSPPAG00000036314	SNRPB	97	85.333	Pan_paniscus
ENSMICG00000015983	-	87	89.947	ENSPPRG00000003233	-	97	85.333	Panthera_pardus
ENSMICG00000015983	-	86	89.894	ENSPTIG00000007468	SNRPB	97	85.268	Panthera_tigris_altaica
ENSMICG00000015983	-	87	89.947	ENSPTRG00000013176	SNRPB	97	85.333	Pan_troglodytes
ENSMICG00000015983	-	87	89.947	ENSPANG00000020362	SNRPB	99	82.773	Papio_anubis
ENSMICG00000015983	-	77	82.738	ENSPKIG00000002865	snrpb	75	83.425	Paramormyrops_kingsleyae
ENSMICG00000015983	-	86	86.702	ENSPSIG00000014125	SNRPB	92	82.143	Pelodiscus_sinensis
ENSMICG00000015983	-	82	80.337	ENSPMGG00000016349	snrpb	74	81.250	Periophthalmus_magnuspinnatus
ENSMICG00000015983	-	87	89.947	ENSPEMG00000007948	Snrpb	97	85.333	Peromyscus_maniculatus_bairdii
ENSMICG00000015983	-	83	88.462	ENSPCIG00000004694	SNRPB	76	88.462	Phascolarctos_cinereus
ENSMICG00000015983	-	68	85.906	ENSPFOG00000011802	snrpb	63	85.906	Poecilia_formosa
ENSMICG00000015983	-	71	76.129	ENSPLAG00000014130	snrpb	59	84.444	Poecilia_latipinna
ENSMICG00000015983	-	62	84.444	ENSPREG00000015515	snrpb	62	84.444	Poecilia_reticulata
ENSMICG00000015983	-	87	89.947	ENSPPYG00000010841	SNRPB	97	85.333	Pongo_abelii
ENSMICG00000015983	-	87	89.947	ENSPCOG00000013686	SNRPB	97	85.333	Propithecus_coquereli
ENSMICG00000015983	-	87	88.889	ENSPVAG00000017013	SNRPB	79	84.444	Pteropus_vampyrus
ENSMICG00000015983	-	83	82.320	ENSPNYG00000014788	snrpb	74	83.978	Pundamilia_nyererei
ENSMICG00000015983	-	81	83.616	ENSPNAG00000016126	snrpb	75	85.083	Pygocentrus_nattereri
ENSMICG00000015983	-	87	89.947	ENSRNOG00000006961	Snrpb	97	85.333	Rattus_norvegicus
ENSMICG00000015983	-	78	90.000	ENSRBIG00000040505	SNRPB	78	89.503	Rhinopithecus_bieti
ENSMICG00000015983	-	87	89.947	ENSRROG00000036094	SNRPB	97	85.333	Rhinopithecus_roxellana
ENSMICG00000015983	-	87	89.947	ENSSBOG00000027310	SNRPB	97	85.333	Saimiri_boliviensis_boliviensis
ENSMICG00000015983	-	84	89.071	ENSSHAG00000010394	SNRPB	76	89.071	Sarcophilus_harrisii
ENSMICG00000015983	-	77	82.143	ENSSFOG00015002870	snrpb	76	83.425	Scleropages_formosus
ENSMICG00000015983	-	84	81.967	ENSSMAG00000006766	snrpb	75	83.425	Scophthalmus_maximus
ENSMICG00000015983	-	83	82.320	ENSSDUG00000018539	snrpb	74	83.978	Seriola_dumerili
ENSMICG00000015983	-	83	82.320	ENSSLDG00000022391	snrpb	74	83.978	Seriola_lalandi_dorsalis
ENSMICG00000015983	-	86	76.596	ENSSARG00000003084	SNRPB	97	73.568	Sorex_araneus
ENSMICG00000015983	-	86	86.702	ENSSPUG00000015659	SNRPB	94	82.143	Sphenodon_punctatus
ENSMICG00000015983	-	83	82.320	ENSSPAG00000021992	snrpb	74	83.978	Stegastes_partitus
ENSMICG00000015983	-	84	72.131	ENSSSCG00000011966	-	76	67.956	Sus_scrofa
ENSMICG00000015983	-	87	90.476	ENSSSCG00000040857	-	97	85.778	Sus_scrofa
ENSMICG00000015983	-	81	71.186	ENSTGUG00000005684	SNRPB	59	85.714	Taeniopygia_guttata
ENSMICG00000015983	-	84	81.967	ENSTRUG00000023094	snrpb	78	83.425	Takifugu_rubripes
ENSMICG00000015983	-	84	81.967	ENSTNIG00000002991	snrpb	75	83.425	Tetraodon_nigroviridis
ENSMICG00000015983	-	78	90.000	ENSUAMG00000005984	-	87	89.503	Ursus_americanus
ENSMICG00000015983	-	64	87.050	ENSUMAG00000002123	-	63	88.321	Ursus_maritimus
ENSMICG00000015983	-	87	89.418	ENSVVUG00000025654	-	99	82.353	Vulpes_vulpes
ENSMICG00000015983	-	95	75.362	ENSVVUG00000010086	-	82	74.211	Vulpes_vulpes
ENSMICG00000015983	-	87	85.714	ENSXETG00000027266	snrpb	97	80.435	Xenopus_tropicalis
ENSMICG00000015983	-	71	76.129	ENSXMAG00000028767	snrpb	58	84.444	Xiphophorus_maculatus