EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000016053 (Gene tree)
Gene ID: 105855234
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 135140 bases
Position: chr17:12612013-12747152
Accession: 105855234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000020724	R3H	PF01424.22	5.4e-05	1	1
ENSMICP00000014657	R3H	PF01424.22	6e-05	1	1
ENSMICP00000028434	RNA_bind	PF08675.11	1.4e-33	1	1
ENSMICP00000020724	RNA_bind	PF08675.11	2e-33	1	1
ENSMICP00000014657	RNA_bind	PF08675.11	2.1e-33	1	1
ENSMICP00000014657	CAF1	PF04857.20	4.4e-89	1	1
ENSMICP00000020724	CAF1	PF04857.20	9.7e-68	1	2
ENSMICP00000020724	CAF1	PF04857.20	9.7e-68	2	2
ENSMICP00000028434	CAF1	PF04857.20	6.3e-52	1	2
ENSMICP00000028434	CAF1	PF04857.20	6.3e-52	2	2
ENSMICP00000043174	CAF1	PF04857.20	9.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000063950	PARN-204	340	-	ENSMICP00000043174	65 (aa)	-	UPI000C2EA39A
ENSMICT00000016076	PARN-201	3013	XM_012736094	ENSMICP00000014657	638 (aa)	XP_012591548	UPI000643A73C
ENSMICT00000053518	PARN-202	1779	-	ENSMICP00000020724	592 (aa)	-	UPI00085B169D
ENSMICT00000030998	PARN-203	1392	-	ENSMICP00000028434	463 (aa)	-	UPI00085B3F22

Gene Model

Click here to download ENSMICG00000016053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000016053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000016053	PARN	100	98.462	ENSG00000140694	PARN	100	98.462	Homo_sapiens
ENSMICG00000016053	PARN	92	78.333	ENSAPOG00000019730	-	100	68.326	Acanthochromis_polyacanthus
ENSMICG00000016053	PARN	100	98.305	ENSAMEG00000011208	PARN	100	93.427	Ailuropoda_melanoleuca
ENSMICG00000016053	PARN	92	76.667	ENSACIG00000000619	parn	97	68.269	Amphilophus_citrinellus
ENSMICG00000016053	PARN	91	76.271	ENSAOCG00000003465	parn	83	73.333	Amphiprion_ocellaris
ENSMICG00000016053	PARN	76	76.434	ENSAPEG00000010661	parn	93	76.434	Amphiprion_percula
ENSMICG00000016053	PARN	99	69.372	ENSATEG00000004661	parn	88	71.337	Anabas_testudineus
ENSMICG00000016053	PARN	99	84.202	ENSAPLG00000013914	PARN	99	84.202	Anas_platyrhynchos
ENSMICG00000016053	PARN	100	88.136	ENSACAG00000004973	PARN	100	79.385	Anolis_carolinensis
ENSMICG00000016053	PARN	100	98.462	ENSANAG00000031516	PARN	100	98.462	Aotus_nancymaae
ENSMICG00000016053	PARN	91	76.271	ENSACLG00000004742	parn	84	74.486	Astatotilapia_calliptera
ENSMICG00000016053	PARN	91	77.966	ENSAMXG00000012390	parn	92	72.174	Astyanax_mexicanus
ENSMICG00000016053	PARN	100	100.000	ENSBTAG00000018097	PARN	100	93.588	Bos_taurus
ENSMICG00000016053	PARN	100	98.462	ENSCJAG00000015866	PARN	100	98.462	Callithrix_jacchus
ENSMICG00000016053	PARN	100	96.610	ENSCAFG00000018795	PARN	100	94.201	Canis_familiaris
ENSMICG00000016053	PARN	100	98.305	ENSCAFG00020024126	PARN	100	94.201	Canis_lupus_dingo
ENSMICG00000016053	PARN	100	100.000	ENSCHIG00000018143	PARN	100	94.044	Capra_hircus
ENSMICG00000016053	PARN	73	63.825	ENSCAPG00000007984	PARN	78	63.825	Cavia_aperea
ENSMICG00000016053	PARN	100	96.610	ENSCPOG00000002263	PARN	100	91.379	Cavia_porcellus
ENSMICG00000016053	PARN	100	98.462	ENSCCAG00000030367	PARN	100	98.462	Cebus_capucinus
ENSMICG00000016053	PARN	91	98.305	ENSCATG00000041368	PARN	100	98.434	Cercocebus_atys
ENSMICG00000016053	PARN	100	94.915	ENSCLAG00000015406	PARN	99	91.379	Chinchilla_lanigera
ENSMICG00000016053	PARN	100	98.305	ENSCSAG00000008142	PARN	100	96.088	Chlorocebus_sabaeus
ENSMICG00000016053	PARN	98	100.000	ENSCHOG00000007014	PARN	100	77.021	Choloepus_hoffmanni
ENSMICG00000016053	PARN	90	85.283	ENSCPBG00000006609	PARN	97	86.059	Chrysemys_picta_bellii
ENSMICG00000016053	PARN	88	47.368	ENSCING00000010142	-	99	43.985	Ciona_intestinalis
ENSMICG00000016053	PARN	91	98.305	ENSCANG00000023734	-	100	85.455	Colobus_angolensis_palliatus
ENSMICG00000016053	PARN	100	98.305	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSMICG00000016053	PARN	100	98.305	ENSCGRG00001012096	Parn	100	87.167	Cricetulus_griseus_chok1gshd
ENSMICG00000016053	PARN	100	98.305	ENSCGRG00000004939	Parn	100	87.167	Cricetulus_griseus_crigri
ENSMICG00000016053	PARN	94	77.966	ENSCSEG00000002064	parn	100	63.801	Cynoglossus_semilaevis
ENSMICG00000016053	PARN	91	76.271	ENSCVAG00000014848	parn	83	73.116	Cyprinodon_variegatus
ENSMICG00000016053	PARN	100	69.492	ENSDARG00000102634	parn	100	58.333	Danio_rerio
ENSMICG00000016053	PARN	100	100.000	ENSDNOG00000000833	PARN	100	93.574	Dasypus_novemcinctus
ENSMICG00000016053	PARN	91	98.305	ENSDORG00000027812	-	100	88.182	Dipodomys_ordii
ENSMICG00000016053	PARN	92	93.333	ENSETEG00000014828	-	78	92.776	Echinops_telfairi
ENSMICG00000016053	PARN	100	100.000	ENSEASG00005011400	PARN	100	93.574	Equus_asinus_asinus
ENSMICG00000016053	PARN	100	98.305	ENSECAG00000017792	PARN	100	93.417	Equus_caballus
ENSMICG00000016053	PARN	92	95.000	ENSEEUG00000010370	PARN	86	82.805	Erinaceus_europaeus
ENSMICG00000016053	PARN	91	77.966	ENSELUG00000013139	parn	77	71.886	Esox_lucius
ENSMICG00000016053	PARN	100	98.305	ENSFCAG00000044961	PARN	100	98.305	Felis_catus
ENSMICG00000016053	PARN	58	30.570	ENSFALG00000012081	PNLDC1	70	31.053	Ficedula_albicollis
ENSMICG00000016053	PARN	98	86.538	ENSFALG00000003911	PARN	98	83.677	Ficedula_albicollis
ENSMICG00000016053	PARN	100	96.610	ENSFDAG00000009234	PARN	100	90.909	Fukomys_damarensis
ENSMICG00000016053	PARN	98	70.312	ENSFHEG00000013738	parn	100	70.312	Fundulus_heteroclitus
ENSMICG00000016053	PARN	91	76.271	ENSGMOG00000003231	parn	97	76.306	Gadus_morhua
ENSMICG00000016053	PARN	100	89.831	ENSGALG00000003091	PARN	100	82.602	Gallus_gallus
ENSMICG00000016053	PARN	91	77.966	ENSGAFG00000011061	parn	84	72.651	Gambusia_affinis
ENSMICG00000016053	PARN	100	72.881	ENSGACG00000019501	parn	100	68.896	Gasterosteus_aculeatus
ENSMICG00000016053	PARN	76	77.620	ENSGAGG00000023281	PARN	83	80.982	Gopherus_agassizii
ENSMICG00000016053	PARN	100	98.462	ENSGGOG00000025224	PARN	100	98.462	Gorilla_gorilla
ENSMICG00000016053	PARN	91	76.271	ENSHBUG00000017906	parn	92	75.407	Haplochromis_burtoni
ENSMICG00000016053	PARN	100	96.610	ENSHGLG00000010886	PARN	100	90.909	Heterocephalus_glaber_female
ENSMICG00000016053	PARN	100	96.610	ENSHGLG00100014659	PARN	100	90.909	Heterocephalus_glaber_male
ENSMICG00000016053	PARN	80	82.692	ENSHCOG00000008683	parn	93	72.727	Hippocampus_comes
ENSMICG00000016053	PARN	91	67.797	ENSIPUG00000012401	parn	84	62.823	Ictalurus_punctatus
ENSMICG00000016053	PARN	100	98.305	ENSSTOG00000007519	PARN	100	92.476	Ictidomys_tridecemlineatus
ENSMICG00000016053	PARN	100	100.000	ENSJJAG00000023049	Parn	100	89.028	Jaculus_jaculus
ENSMICG00000016053	PARN	91	74.576	ENSKMAG00000009462	parn	84	73.379	Kryptolebias_marmoratus
ENSMICG00000016053	PARN	91	76.271	ENSLBEG00000009167	parn	90	72.743	Labrus_bergylta
ENSMICG00000016053	PARN	79	78.968	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSMICG00000016053	PARN	91	79.661	ENSLOCG00000000715	parn	85	76.361	Lepisosteus_oculatus
ENSMICG00000016053	PARN	100	100.000	ENSLAFG00000015036	PARN	100	92.947	Loxodonta_africana
ENSMICG00000016053	PARN	100	98.305	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSMICG00000016053	PARN	100	98.305	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSMICG00000016053	PARN	100	98.305	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSMICG00000016053	PARN	100	98.305	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSMICG00000016053	PARN	91	76.271	ENSMAMG00000006939	parn	84	72.148	Mastacembelus_armatus
ENSMICG00000016053	PARN	91	76.271	ENSMZEG00005013590	parn	95	73.509	Maylandia_zebra
ENSMICG00000016053	PARN	94	96.552	ENSMGAG00000001004	PARN	95	82.730	Meleagris_gallopavo
ENSMICG00000016053	PARN	95	94.286	ENSMAUG00000008025	Parn	100	80.989	Mesocricetus_auratus
ENSMICG00000016053	PARN	91	96.610	ENSMOCG00000022211	Parn	100	92.105	Microtus_ochrogaster
ENSMICG00000016053	PARN	100	77.966	ENSMMOG00000011333	parn	89	75.413	Mola_mola
ENSMICG00000016053	PARN	92	91.667	ENSMODG00000004915	PARN	99	94.355	Monodelphis_domestica
ENSMICG00000016053	PARN	91	75.000	ENSMALG00000019426	parn	91	78.771	Monopterus_albus
ENSMICG00000016053	PARN	100	96.610	MGP_CAROLIEiJ_G0020466	Parn	100	87.618	Mus_caroli
ENSMICG00000016053	PARN	100	94.915	ENSMUSG00000022685	Parn	100	93.902	Mus_musculus
ENSMICG00000016053	PARN	51	31.024	ENSMUSG00000073460	Pnldc1	66	36.496	Mus_musculus
ENSMICG00000016053	PARN	100	98.305	MGP_PahariEiJ_G0016172	Parn	100	87.461	Mus_pahari
ENSMICG00000016053	PARN	100	96.610	MGP_SPRETEiJ_G0021361	Parn	100	87.304	Mus_spretus
ENSMICG00000016053	PARN	100	100.000	ENSMPUG00000014464	PARN	100	93.260	Mustela_putorius_furo
ENSMICG00000016053	PARN	91	96.610	ENSMLUG00000005414	PARN	100	94.737	Myotis_lucifugus
ENSMICG00000016053	PARN	91	100.000	ENSNGAG00000024082	-	100	89.091	Nannospalax_galili
ENSMICG00000016053	PARN	91	76.271	ENSNBRG00000006805	parn	93	74.909	Neolamprologus_brichardi
ENSMICG00000016053	PARN	100	98.462	ENSNLEG00000010241	PARN	100	98.462	Nomascus_leucogenys
ENSMICG00000016053	PARN	93	94.231	ENSMEUG00000008178	-	68	94.231	Notamacropus_eugenii
ENSMICG00000016053	PARN	98	100.000	ENSOPRG00000012187	PARN	100	87.005	Ochotona_princeps
ENSMICG00000016053	PARN	100	96.610	ENSODEG00000001617	PARN	100	82.527	Octodon_degus
ENSMICG00000016053	PARN	100	76.271	ENSONIG00000000151	parn	100	69.538	Oreochromis_niloticus
ENSMICG00000016053	PARN	82	83.684	ENSOANG00000020155	-	97	84.211	Ornithorhynchus_anatinus
ENSMICG00000016053	PARN	99	92.857	ENSOCUG00000000322	PARN	100	92.126	Oryctolagus_cuniculus
ENSMICG00000016053	PARN	100	75.385	ENSORLG00000024893	-	100	66.968	Oryzias_latipes
ENSMICG00000016053	PARN	93	77.966	ENSORLG00020010313	parn	88	70.820	Oryzias_latipes_hni
ENSMICG00000016053	PARN	93	77.966	ENSORLG00015000300	parn	88	70.656	Oryzias_latipes_hsok
ENSMICG00000016053	PARN	91	77.966	ENSOMEG00000019555	parn	97	66.516	Oryzias_melastigma
ENSMICG00000016053	PARN	92	96.667	ENSOGAG00000014626	PARN	100	94.545	Otolemur_garnettii
ENSMICG00000016053	PARN	91	100.000	ENSOARG00000007574	PARN	100	97.773	Ovis_aries
ENSMICG00000016053	PARN	100	98.462	ENSPPAG00000031438	PARN	100	98.462	Pan_paniscus
ENSMICG00000016053	PARN	100	98.305	ENSPPRG00000018583	PARN	100	98.305	Panthera_pardus
ENSMICG00000016053	PARN	100	98.305	ENSPTIG00000012135	PARN	100	98.305	Panthera_tigris_altaica
ENSMICG00000016053	PARN	100	98.462	ENSPTRG00000007792	PARN	100	98.462	Pan_troglodytes
ENSMICG00000016053	PARN	100	98.305	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSMICG00000016053	PARN	97	77.966	ENSPKIG00000022807	parn	91	69.558	Paramormyrops_kingsleyae
ENSMICG00000016053	PARN	98	88.136	ENSPSIG00000014804	PARN	100	83.882	Pelodiscus_sinensis
ENSMICG00000016053	PARN	91	74.576	ENSPMGG00000014431	parn	77	73.646	Periophthalmus_magnuspinnatus
ENSMICG00000016053	PARN	100	96.610	ENSPEMG00000018439	Parn	100	84.639	Peromyscus_maniculatus_bairdii
ENSMICG00000016053	PARN	81	67.692	ENSPMAG00000003956	parn	99	67.692	Petromyzon_marinus
ENSMICG00000016053	PARN	100	93.846	ENSPCIG00000001259	PARN	100	93.846	Phascolarctos_cinereus
ENSMICG00000016053	PARN	91	77.966	ENSPFOG00000012823	parn	84	72.391	Poecilia_formosa
ENSMICG00000016053	PARN	91	77.966	ENSPLAG00000006395	parn	84	72.559	Poecilia_latipinna
ENSMICG00000016053	PARN	91	77.966	ENSPMEG00000007711	parn	84	72.559	Poecilia_mexicana
ENSMICG00000016053	PARN	91	77.966	ENSPREG00000000147	parn	84	72.222	Poecilia_reticulata
ENSMICG00000016053	PARN	100	96.610	ENSPPYG00000007123	PARN	100	95.476	Pongo_abelii
ENSMICG00000016053	PARN	93	100.000	ENSPCAG00000001741	PARN	100	82.810	Procavia_capensis
ENSMICG00000016053	PARN	100	100.000	ENSPCOG00000019292	PARN	100	100.000	Propithecus_coquereli
ENSMICG00000016053	PARN	98	100.000	ENSPVAG00000002547	PARN	100	90.333	Pteropus_vampyrus
ENSMICG00000016053	PARN	98	76.271	ENSPNYG00000006835	parn	95	70.928	Pundamilia_nyererei
ENSMICG00000016053	PARN	84	72.998	ENSPNAG00000018905	parn	86	72.998	Pygocentrus_nattereri
ENSMICG00000016053	PARN	100	94.915	ENSRNOG00000002912	Parn	97	88.776	Rattus_norvegicus
ENSMICG00000016053	PARN	72	94.595	ENSRBIG00000018726	PARN	100	94.595	Rhinopithecus_bieti
ENSMICG00000016053	PARN	92	96.667	ENSRROG00000020116	-	86	96.721	Rhinopithecus_roxellana
ENSMICG00000016053	PARN	72	94.595	ENSRROG00000011162	-	100	94.595	Rhinopithecus_roxellana
ENSMICG00000016053	PARN	100	98.305	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSMICG00000016053	PARN	83	90.741	ENSSHAG00000008493	PARN	94	93.541	Sarcophilus_harrisii
ENSMICG00000016053	PARN	94	77.966	ENSSFOG00015014165	parn	94	73.549	Scleropages_formosus
ENSMICG00000016053	PARN	100	68.182	ENSSMAG00000000685	parn	100	63.020	Scophthalmus_maximus
ENSMICG00000016053	PARN	99	68.300	ENSSDUG00000014555	parn	83	73.801	Seriola_dumerili
ENSMICG00000016053	PARN	91	74.576	ENSSLDG00000007603	-	100	63.348	Seriola_lalandi_dorsalis
ENSMICG00000016053	PARN	91	79.793	ENSSARG00000014339	PARN	100	79.793	Sorex_araneus
ENSMICG00000016053	PARN	100	88.136	ENSSPUG00000007719	PARN	100	85.737	Sphenodon_punctatus
ENSMICG00000016053	PARN	91	76.271	ENSSPAG00000007095	parn	89	73.042	Stegastes_partitus
ENSMICG00000016053	PARN	100	100.000	ENSSSCG00000007878	PARN	89	93.103	Sus_scrofa
ENSMICG00000016053	PARN	99	83.307	ENSTGUG00000004971	PARN	99	83.570	Taeniopygia_guttata
ENSMICG00000016053	PARN	100	69.697	ENSTRUG00000015208	-	94	69.697	Takifugu_rubripes
ENSMICG00000016053	PARN	100	77.966	ENSTNIG00000008252	parn	100	69.350	Tetraodon_nigroviridis
ENSMICG00000016053	PARN	88	83.744	ENSTBEG00000010407	PARN	100	80.484	Tupaia_belangeri
ENSMICG00000016053	PARN	98	100.000	ENSTTRG00000002843	PARN	100	88.906	Tursiops_truncatus
ENSMICG00000016053	PARN	68	83.716	ENSUAMG00000008283	PARN	90	83.716	Ursus_americanus
ENSMICG00000016053	PARN	100	100.000	ENSUMAG00000004527	PARN	100	93.887	Ursus_maritimus
ENSMICG00000016053	PARN	95	100.000	ENSVPAG00000008968	PARN	100	90.391	Vicugna_pacos
ENSMICG00000016053	PARN	100	98.305	ENSVVUG00000019509	PARN	100	94.357	Vulpes_vulpes
ENSMICG00000016053	PARN	100	80.328	ENSXETG00000010994	parn	100	83.270	Xenopus_tropicalis
ENSMICG00000016053	PARN	91	77.966	ENSXCOG00000015990	parn	96	69.192	Xiphophorus_couchianus
ENSMICG00000016053	PARN	91	77.966	ENSXMAG00000014783	parn	84	72.896	Xiphophorus_maculatus