EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000016424 (Gene tree)
Gene ID: 105880080
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 84121 bases
Position: chr31:33294058-33378178
Accession: 105880080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000014985	Npa1	PF11707.8	1.7e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000016441	URB1-201	6801	XM_020284712	ENSMICP00000014985	2266 (aa)	XP_020140301	UPI00098AB96E

Gene Model

Click here to download ENSMICG00000016424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000016424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000016424	URB1	99	86.125	ENSG00000142207	URB1	99	86.085	Homo_sapiens
ENSMICG00000016424	URB1	99	42.851	ENSAPOG00000020308	urb1	100	42.938	Acanthochromis_polyacanthus
ENSMICG00000016424	URB1	99	80.669	ENSAMEG00000011998	URB1	99	80.713	Ailuropoda_melanoleuca
ENSMICG00000016424	URB1	94	45.244	ENSACIG00000003248	urb1	96	45.244	Amphilophus_citrinellus
ENSMICG00000016424	URB1	99	41.340	ENSAOCG00000010364	urb1	99	41.514	Amphiprion_ocellaris
ENSMICG00000016424	URB1	97	52.643	ENSAPEG00000010758	urb1	99	52.643	Amphiprion_percula
ENSMICG00000016424	URB1	98	44.400	ENSATEG00000011790	urb1	97	44.282	Anabas_testudineus
ENSMICG00000016424	URB1	97	56.146	ENSAPLG00000012791	URB1	100	56.236	Anas_platyrhynchos
ENSMICG00000016424	URB1	99	53.089	ENSACAG00000002817	URB1	99	52.774	Anolis_carolinensis
ENSMICG00000016424	URB1	99	85.167	ENSANAG00000024617	URB1	99	85.167	Aotus_nancymaae
ENSMICG00000016424	URB1	99	44.867	ENSACLG00000024865	urb1	99	44.663	Astatotilapia_calliptera
ENSMICG00000016424	URB1	99	40.218	ENSAMXG00000012306	urb1	99	40.350	Astyanax_mexicanus
ENSMICG00000016424	URB1	100	77.257	ENSBTAG00000012412	URB1	100	77.344	Bos_taurus
ENSMICG00000016424	URB1	99	84.615	ENSCJAG00000009118	URB1	99	84.615	Callithrix_jacchus
ENSMICG00000016424	URB1	99	80.465	ENSCAFG00000008892	URB1	99	80.465	Canis_familiaris
ENSMICG00000016424	URB1	99	79.260	ENSCAFG00020025994	-	99	79.260	Canis_lupus_dingo
ENSMICG00000016424	URB1	99	80.229	ENSCAFG00020025987	-	99	80.229	Canis_lupus_dingo
ENSMICG00000016424	URB1	100	76.468	ENSCHIG00000015645	URB1	100	76.512	Capra_hircus
ENSMICG00000016424	URB1	99	84.670	ENSTSYG00000013286	URB1	99	84.670	Carlito_syrichta
ENSMICG00000016424	URB1	98	78.372	ENSCAPG00000015589	URB1	99	78.372	Cavia_aperea
ENSMICG00000016424	URB1	100	79.322	ENSCPOG00000006748	URB1	100	79.322	Cavia_porcellus
ENSMICG00000016424	URB1	99	85.249	ENSCCAG00000021299	URB1	99	85.249	Cebus_capucinus
ENSMICG00000016424	URB1	99	86.129	ENSCATG00000042630	URB1	99	86.129	Cercocebus_atys
ENSMICG00000016424	URB1	99	80.554	ENSCLAG00000005262	URB1	99	80.554	Chinchilla_lanigera
ENSMICG00000016424	URB1	99	84.130	ENSCSAG00000009584	URB1	99	84.130	Chlorocebus_sabaeus
ENSMICG00000016424	URB1	99	58.046	ENSCPBG00000006454	URB1	99	57.959	Chrysemys_picta_bellii
ENSMICG00000016424	URB1	99	85.733	ENSCANG00000031088	URB1	99	85.733	Colobus_angolensis_palliatus
ENSMICG00000016424	URB1	99	75.959	ENSCGRG00001010616	Urb1	99	76.092	Cricetulus_griseus_chok1gshd
ENSMICG00000016424	URB1	98	75.946	ENSCGRG00000015840	Urb1	99	75.946	Cricetulus_griseus_crigri
ENSMICG00000016424	URB1	99	41.768	ENSCSEG00000012616	urb1	99	41.656	Cynoglossus_semilaevis
ENSMICG00000016424	URB1	93	51.667	ENSCVAG00000009076	urb1	99	52.000	Cyprinodon_variegatus
ENSMICG00000016424	URB1	99	43.133	ENSDARG00000060308	urb1	99	43.509	Danio_rerio
ENSMICG00000016424	URB1	85	80.383	ENSDNOG00000015586	URB1	99	80.383	Dasypus_novemcinctus
ENSMICG00000016424	URB1	99	79.005	ENSDORG00000006735	Urb1	99	79.005	Dipodomys_ordii
ENSMICG00000016424	URB1	92	80.000	ENSETEG00000009080	URB1	92	80.000	Echinops_telfairi
ENSMICG00000016424	URB1	99	80.987	ENSEASG00005007711	URB1	97	83.066	Equus_asinus_asinus
ENSMICG00000016424	URB1	97	89.298	ENSECAG00000013206	URB1	99	89.298	Equus_caballus
ENSMICG00000016424	URB1	58	89.167	ENSEEUG00000003626	-	57	89.167	Erinaceus_europaeus
ENSMICG00000016424	URB1	99	44.626	ENSELUG00000020516	urb1	98	44.670	Esox_lucius
ENSMICG00000016424	URB1	99	81.041	ENSFCAG00000002177	URB1	99	80.900	Felis_catus
ENSMICG00000016424	URB1	98	51.307	ENSFALG00000004636	URB1	99	51.506	Ficedula_albicollis
ENSMICG00000016424	URB1	99	79.666	ENSFDAG00000007288	URB1	95	79.842	Fukomys_damarensis
ENSMICG00000016424	URB1	99	41.554	ENSFHEG00000000202	urb1	99	42.263	Fundulus_heteroclitus
ENSMICG00000016424	URB1	92	46.673	ENSGMOG00000001838	urb1	93	46.469	Gadus_morhua
ENSMICG00000016424	URB1	99	56.176	ENSGALG00000015887	URB1	99	56.002	Gallus_gallus
ENSMICG00000016424	URB1	93	51.739	ENSGAFG00000020694	urb1	97	52.017	Gambusia_affinis
ENSMICG00000016424	URB1	99	44.376	ENSGACG00000011703	urb1	99	44.464	Gasterosteus_aculeatus
ENSMICG00000016424	URB1	99	57.498	ENSGAGG00000022544	URB1	99	57.454	Gopherus_agassizii
ENSMICG00000016424	URB1	99	86.218	ENSGGOG00000000285	URB1	99	86.218	Gorilla_gorilla
ENSMICG00000016424	URB1	99	44.912	ENSHBUG00000001904	urb1	99	44.707	Haplochromis_burtoni
ENSMICG00000016424	URB1	100	78.163	ENSHGLG00000004907	URB1	100	78.163	Heterocephalus_glaber_female
ENSMICG00000016424	URB1	100	78.841	ENSHGLG00100010749	URB1	100	78.841	Heterocephalus_glaber_male
ENSMICG00000016424	URB1	72	48.235	ENSHCOG00000018683	urb1	97	48.824	Hippocampus_comes
ENSMICG00000016424	URB1	99	40.679	ENSIPUG00000014721	urb1	99	40.897	Ictalurus_punctatus
ENSMICG00000016424	URB1	99	81.907	ENSSTOG00000004539	URB1	99	81.770	Ictidomys_tridecemlineatus
ENSMICG00000016424	URB1	99	40.949	ENSKMAG00000006001	urb1	98	53.135	Kryptolebias_marmoratus
ENSMICG00000016424	URB1	94	51.102	ENSLBEG00000027208	urb1	98	50.943	Labrus_bergylta
ENSMICG00000016424	URB1	99	48.446	ENSLACG00000017059	URB1	99	48.489	Latimeria_chalumnae
ENSMICG00000016424	URB1	99	45.924	ENSLOCG00000009190	urb1	99	45.741	Lepisosteus_oculatus
ENSMICG00000016424	URB1	99	78.421	ENSLAFG00000010407	URB1	100	78.421	Loxodonta_africana
ENSMICG00000016424	URB1	99	85.777	ENSMFAG00000034391	URB1	97	85.777	Macaca_fascicularis
ENSMICG00000016424	URB1	99	85.557	ENSMMUG00000010295	URB1	99	85.557	Macaca_mulatta
ENSMICG00000016424	URB1	99	84.368	ENSMNEG00000032981	URB1	99	84.368	Macaca_nemestrina
ENSMICG00000016424	URB1	99	85.865	ENSMLEG00000041435	URB1	99	85.865	Mandrillus_leucophaeus
ENSMICG00000016424	URB1	99	43.275	ENSMAMG00000011238	urb1	99	43.362	Mastacembelus_armatus
ENSMICG00000016424	URB1	99	40.228	ENSMZEG00005011862	urb1	99	40.078	Maylandia_zebra
ENSMICG00000016424	URB1	98	56.997	ENSMGAG00000014512	URB1	99	56.819	Meleagris_gallopavo
ENSMICG00000016424	URB1	94	80.059	ENSMAUG00000010516	Urb1	99	79.912	Mesocricetus_auratus
ENSMICG00000016424	URB1	99	74.063	ENSMOCG00000012613	Urb1	99	74.063	Microtus_ochrogaster
ENSMICG00000016424	URB1	99	64.376	ENSMODG00000021076	URB1	100	64.245	Monodelphis_domestica
ENSMICG00000016424	URB1	94	51.753	ENSMALG00000017411	urb1	97	51.949	Monopterus_albus
ENSMICG00000016424	URB1	99	75.143	MGP_CAROLIEiJ_G0020948	Urb1	99	75.143	Mus_caroli
ENSMICG00000016424	URB1	99	75.495	ENSMUSG00000039929	Urb1	99	75.495	Mus_musculus
ENSMICG00000016424	URB1	99	75.187	MGP_PahariEiJ_G0016653	Urb1	99	75.187	Mus_pahari
ENSMICG00000016424	URB1	99	75.308	MGP_SPRETEiJ_G0021854	Urb1	99	75.308	Mus_spretus
ENSMICG00000016424	URB1	99	79.771	ENSMPUG00000001123	URB1	99	79.771	Mustela_putorius_furo
ENSMICG00000016424	URB1	99	76.178	ENSNGAG00000001905	Urb1	99	76.178	Nannospalax_galili
ENSMICG00000016424	URB1	82	45.072	ENSNBRG00000001049	urb1	99	45.003	Neolamprologus_brichardi
ENSMICG00000016424	URB1	99	84.048	ENSNLEG00000026872	URB1	99	84.016	Nomascus_leucogenys
ENSMICG00000016424	URB1	93	66.922	ENSMEUG00000010828	URB1	96	59.001	Notamacropus_eugenii
ENSMICG00000016424	URB1	99	73.955	ENSOPRG00000013482	URB1	100	73.955	Ochotona_princeps
ENSMICG00000016424	URB1	99	78.628	ENSODEG00000002587	URB1	99	78.628	Octodon_degus
ENSMICG00000016424	URB1	99	45.081	ENSONIG00000005599	urb1	99	45.081	Oreochromis_niloticus
ENSMICG00000016424	URB1	99	80.908	ENSOCUG00000009381	URB1	99	80.908	Oryctolagus_cuniculus
ENSMICG00000016424	URB1	99	43.682	ENSORLG00000003429	urb1	99	43.900	Oryzias_latipes
ENSMICG00000016424	URB1	99	43.556	ENSORLG00020013785	urb1	99	43.775	Oryzias_latipes_hni
ENSMICG00000016424	URB1	99	42.365	ENSORLG00015019421	urb1	98	46.551	Oryzias_latipes_hsok
ENSMICG00000016424	URB1	77	49.941	ENSOMEG00000002094	urb1	98	51.006	Oryzias_melastigma
ENSMICG00000016424	URB1	99	87.472	ENSOGAG00000017140	URB1	100	87.472	Otolemur_garnettii
ENSMICG00000016424	URB1	97	76.466	ENSOARG00000013679	URB1	99	76.805	Ovis_aries
ENSMICG00000016424	URB1	99	86.306	ENSPPAG00000003423	URB1	99	86.306	Pan_paniscus
ENSMICG00000016424	URB1	99	81.385	ENSPPRG00000023131	URB1	99	81.385	Panthera_pardus
ENSMICG00000016424	URB1	92	79.606	ENSPTIG00000016125	URB1	98	79.842	Panthera_tigris_altaica
ENSMICG00000016424	URB1	99	86.173	ENSPTRG00000013852	URB1	99	86.173	Pan_troglodytes
ENSMICG00000016424	URB1	99	86.041	ENSPANG00000021964	URB1	99	86.041	Papio_anubis
ENSMICG00000016424	URB1	99	45.784	ENSPKIG00000003683	urb1	98	45.903	Paramormyrops_kingsleyae
ENSMICG00000016424	URB1	99	76.004	ENSPEMG00000021205	Urb1	99	76.004	Peromyscus_maniculatus_bairdii
ENSMICG00000016424	URB1	80	34.108	ENSPMAG00000009733	URB1	99	34.047	Petromyzon_marinus
ENSMICG00000016424	URB1	99	63.807	ENSPCIG00000016350	URB1	100	63.672	Phascolarctos_cinereus
ENSMICG00000016424	URB1	97	43.198	ENSPLAG00000004371	urb1	99	43.108	Poecilia_latipinna
ENSMICG00000016424	URB1	99	43.429	ENSPMEG00000006634	urb1	99	43.601	Poecilia_mexicana
ENSMICG00000016424	URB1	99	43.648	ENSPREG00000013453	urb1	99	43.827	Poecilia_reticulata
ENSMICG00000016424	URB1	99	85.506	ENSPPYG00000011359	URB1	99	85.293	Pongo_abelii
ENSMICG00000016424	URB1	99	67.577	ENSPCAG00000007430	URB1	99	67.577	Procavia_capensis
ENSMICG00000016424	URB1	99	93.075	ENSPCOG00000022695	URB1	99	93.075	Propithecus_coquereli
ENSMICG00000016424	URB1	99	79.348	ENSPVAG00000000889	URB1	99	79.348	Pteropus_vampyrus
ENSMICG00000016424	URB1	99	43.503	ENSPNYG00000010589	urb1	99	43.270	Pundamilia_nyererei
ENSMICG00000016424	URB1	100	40.590	ENSPNAG00000019324	urb1	99	40.382	Pygocentrus_nattereri
ENSMICG00000016424	URB1	100	74.967	ENSRNOG00000002080	Urb1	99	75.099	Rattus_norvegicus
ENSMICG00000016424	URB1	99	85.381	ENSRBIG00000033122	URB1	99	85.381	Rhinopithecus_bieti
ENSMICG00000016424	URB1	99	85.513	ENSRROG00000040237	URB1	99	85.513	Rhinopithecus_roxellana
ENSMICG00000016424	URB1	99	84.903	ENSSBOG00000027672	URB1	99	84.903	Saimiri_boliviensis_boliviensis
ENSMICG00000016424	URB1	99	63.529	ENSSHAG00000005140	URB1	100	63.398	Sarcophilus_harrisii
ENSMICG00000016424	URB1	92	46.992	ENSSFOG00015000339	urb1	98	47.011	Scleropages_formosus
ENSMICG00000016424	URB1	99	43.850	ENSSMAG00000003782	urb1	99	43.981	Scophthalmus_maximus
ENSMICG00000016424	URB1	99	44.401	ENSSDUG00000012313	urb1	100	44.314	Seriola_dumerili
ENSMICG00000016424	URB1	99	44.333	ENSSLDG00000023179	urb1	100	44.333	Seriola_lalandi_dorsalis
ENSMICG00000016424	URB1	99	54.957	ENSSPUG00000012447	URB1	100	54.957	Sphenodon_punctatus
ENSMICG00000016424	URB1	99	44.125	ENSSPAG00000006325	urb1	99	44.387	Stegastes_partitus
ENSMICG00000016424	URB1	99	78.232	ENSSSCG00000032024	URB1	99	78.100	Sus_scrofa
ENSMICG00000016424	URB1	73	57.322	ENSTGUG00000013442	URB1	100	57.322	Taeniopygia_guttata
ENSMICG00000016424	URB1	99	43.554	ENSTRUG00000009372	urb1	99	43.418	Takifugu_rubripes
ENSMICG00000016424	URB1	99	42.712	ENSTNIG00000016277	urb1	99	42.712	Tetraodon_nigroviridis
ENSMICG00000016424	URB1	81	87.246	ENSTBEG00000010044	URB1	81	87.246	Tupaia_belangeri
ENSMICG00000016424	URB1	91	79.162	ENSTTRG00000007712	URB1	92	79.372	Tursiops_truncatus
ENSMICG00000016424	URB1	99	80.625	ENSUAMG00000012231	URB1	99	80.625	Ursus_americanus
ENSMICG00000016424	URB1	93	80.449	ENSUMAG00000017419	URB1	99	80.595	Ursus_maritimus
ENSMICG00000016424	URB1	68	89.683	ENSVPAG00000001164	URB1	68	89.683	Vicugna_pacos
ENSMICG00000016424	URB1	99	79.754	ENSVVUG00000000551	URB1	99	79.754	Vulpes_vulpes
ENSMICG00000016424	URB1	99	50.453	ENSXETG00000009895	urb1	99	50.453	Xenopus_tropicalis
ENSMICG00000016424	URB1	99	41.156	ENSXCOG00000005500	urb1	99	41.251	Xiphophorus_couchianus
ENSMICG00000016424	URB1	99	41.295	ENSXMAG00000007253	urb1	99	41.426	Xiphophorus_maculatus