EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000016615 (Gene tree)
Gene ID: 105867615
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 21061 bases
Position: chr26:2544800-2565860
Accession: 105867615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000015135	PolyA_pol	PF01743.20	7.3e-33	1	1
ENSMICP00000044160	PolyA_pol	PF01743.20	7.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000050802	TRNT1-203	174	-	ENSMICP00000021266	57 (aa)	-	UPI000C2EB1AD
ENSMICT00000016609	TRNT1-202	1536	XM_012757868	ENSMICP00000015135	434 (aa)	XP_012613322	UPI000642D62E
ENSMICT00000058603	TRNT1-201	2517	XM_012757867	ENSMICP00000044160	434 (aa)	XP_012613321	UPI000642D62E

Gene Model

Click here to download ENSMICG00000016615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000016615's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000016615	TRNT1	100	92.627	ENSG00000072756	TRNT1	100	92.627	Homo_sapiens
ENSMICG00000016615	TRNT1	98	66.509	ENSAPOG00000013687	trnt1	99	66.509	Acanthochromis_polyacanthus
ENSMICG00000016615	TRNT1	100	91.284	ENSAMEG00000014520	TRNT1	100	91.284	Ailuropoda_melanoleuca
ENSMICG00000016615	TRNT1	98	68.235	ENSACIG00000021706	trnt1	99	68.235	Amphilophus_citrinellus
ENSMICG00000016615	TRNT1	98	67.765	ENSAOCG00000024612	trnt1	99	67.765	Amphiprion_ocellaris
ENSMICG00000016615	TRNT1	96	60.671	ENSAPEG00000022627	trnt1	97	60.671	Amphiprion_percula
ENSMICG00000016615	TRNT1	93	70.720	ENSATEG00000008928	trnt1	99	70.720	Anabas_testudineus
ENSMICG00000016615	TRNT1	89	77.261	ENSAPLG00000004258	TRNT1	96	77.261	Anas_platyrhynchos
ENSMICG00000016615	TRNT1	99	74.596	ENSACAG00000005657	TRNT1	99	74.596	Anolis_carolinensis
ENSMICG00000016615	TRNT1	100	92.627	ENSANAG00000024802	TRNT1	100	92.627	Aotus_nancymaae
ENSMICG00000016615	TRNT1	98	67.294	ENSACLG00000022227	trnt1	99	67.294	Astatotilapia_calliptera
ENSMICG00000016615	TRNT1	97	68.974	ENSAMXG00000003960	trnt1	96	68.810	Astyanax_mexicanus
ENSMICG00000016615	TRNT1	100	91.244	ENSBTAG00000019534	TRNT1	100	91.244	Bos_taurus
ENSMICG00000016615	TRNT1	93	44.391	WBGene00010089	hpo-31	94	44.391	Caenorhabditis_elegans
ENSMICG00000016615	TRNT1	100	92.627	ENSCJAG00000015466	TRNT1	100	92.627	Callithrix_jacchus
ENSMICG00000016615	TRNT1	100	91.014	ENSCAFG00000005985	TRNT1	99	91.014	Canis_familiaris
ENSMICG00000016615	TRNT1	100	91.014	ENSCAFG00020014746	TRNT1	99	91.014	Canis_lupus_dingo
ENSMICG00000016615	TRNT1	100	91.244	ENSCHIG00000007030	TRNT1	99	91.244	Capra_hircus
ENSMICG00000016615	TRNT1	100	92.857	ENSTSYG00000013390	TRNT1	100	92.857	Carlito_syrichta
ENSMICG00000016615	TRNT1	87	74.074	ENSCAPG00000006891	TRNT1	100	74.074	Cavia_aperea
ENSMICG00000016615	TRNT1	99	92.148	ENSCPOG00000007849	TRNT1	100	93.284	Cavia_porcellus
ENSMICG00000016615	TRNT1	95	89.423	ENSCCAG00000002919	TRNT1	100	91.521	Cebus_capucinus
ENSMICG00000016615	TRNT1	99	93.303	ENSCATG00000031985	TRNT1	99	93.303	Cercocebus_atys
ENSMICG00000016615	TRNT1	99	92.610	ENSCLAG00000005186	TRNT1	99	92.610	Chinchilla_lanigera
ENSMICG00000016615	TRNT1	100	93.548	ENSCSAG00000011052	TRNT1	100	93.548	Chlorocebus_sabaeus
ENSMICG00000016615	TRNT1	85	92.079	ENSCHOG00000005712	TRNT1	85	92.079	Choloepus_hoffmanni
ENSMICG00000016615	TRNT1	94	82.152	ENSCPBG00000017636	TRNT1	93	82.152	Chrysemys_picta_bellii
ENSMICG00000016615	TRNT1	93	44.068	ENSCING00000007069	-	100	44.068	Ciona_intestinalis
ENSMICG00000016615	TRNT1	97	45.261	ENSCSAVG00000007494	-	99	45.261	Ciona_savignyi
ENSMICG00000016615	TRNT1	100	93.088	ENSCANG00000039030	TRNT1	100	93.088	Colobus_angolensis_palliatus
ENSMICG00000016615	TRNT1	100	92.396	ENSCGRG00001009998	Trnt1	100	92.396	Cricetulus_griseus_chok1gshd
ENSMICG00000016615	TRNT1	100	92.396	ENSCGRG00000013410	Trnt1	100	92.396	Cricetulus_griseus_crigri
ENSMICG00000016615	TRNT1	94	69.118	ENSCSEG00000008157	trnt1	96	69.118	Cynoglossus_semilaevis
ENSMICG00000016615	TRNT1	95	69.082	ENSCVAG00000019770	trnt1	97	69.082	Cyprinodon_variegatus
ENSMICG00000016615	TRNT1	94	70.000	ENSDARG00000075297	trnt1	95	70.000	Danio_rerio
ENSMICG00000016615	TRNT1	100	91.475	ENSDNOG00000008837	TRNT1	100	91.475	Dasypus_novemcinctus
ENSMICG00000016615	TRNT1	100	91.475	ENSDORG00000014035	Trnt1	100	91.475	Dipodomys_ordii
ENSMICG00000016615	TRNT1	92	49.752	FBgn0037369	CG2100	83	49.752	Drosophila_melanogaster
ENSMICG00000016615	TRNT1	57	91.566	ENSETEG00000018177	TRNT1	100	91.566	Echinops_telfairi
ENSMICG00000016615	TRNT1	93	63.275	ENSEBUG00000012779	-	95	63.275	Eptatretus_burgeri
ENSMICG00000016615	TRNT1	100	92.396	ENSEASG00005003577	TRNT1	100	92.396	Equus_asinus_asinus
ENSMICG00000016615	TRNT1	100	92.627	ENSECAG00000014420	TRNT1	100	92.627	Equus_caballus
ENSMICG00000016615	TRNT1	100	88.249	ENSEEUG00000009567	TRNT1	100	88.249	Erinaceus_europaeus
ENSMICG00000016615	TRNT1	97	69.048	ENSELUG00000003802	trnt1	98	69.048	Esox_lucius
ENSMICG00000016615	TRNT1	100	91.244	ENSFCAG00000026805	TRNT1	99	91.244	Felis_catus
ENSMICG00000016615	TRNT1	88	76.042	ENSFALG00000013539	TRNT1	99	76.042	Ficedula_albicollis
ENSMICG00000016615	TRNT1	99	92.841	ENSFDAG00000018412	TRNT1	99	92.841	Fukomys_damarensis
ENSMICG00000016615	TRNT1	96	68.322	ENSFHEG00000019294	trnt1	99	68.322	Fundulus_heteroclitus
ENSMICG00000016615	TRNT1	97	66.587	ENSGMOG00000007460	trnt1	97	66.587	Gadus_morhua
ENSMICG00000016615	TRNT1	95	74.638	ENSGALG00000017368	TRNT1	96	74.638	Gallus_gallus
ENSMICG00000016615	TRNT1	94	69.608	ENSGAFG00000008647	trnt1	96	69.608	Gambusia_affinis
ENSMICG00000016615	TRNT1	96	66.588	ENSGACG00000011903	trnt1	99	66.588	Gasterosteus_aculeatus
ENSMICG00000016615	TRNT1	99	79.535	ENSGAGG00000020942	TRNT1	97	79.535	Gopherus_agassizii
ENSMICG00000016615	TRNT1	100	92.857	ENSGGOG00000015286	TRNT1	100	92.857	Gorilla_gorilla
ENSMICG00000016615	TRNT1	98	67.294	ENSHBUG00000002797	trnt1	99	67.294	Haplochromis_burtoni
ENSMICG00000016615	TRNT1	99	86.866	ENSHGLG00000000221	-	99	86.866	Heterocephalus_glaber_female
ENSMICG00000016615	TRNT1	99	92.379	ENSHGLG00000003649	TRNT1	99	92.379	Heterocephalus_glaber_female
ENSMICG00000016615	TRNT1	99	91.224	ENSHGLG00100016421	TRNT1	99	91.224	Heterocephalus_glaber_male
ENSMICG00000016615	TRNT1	94	68.627	ENSHCOG00000010618	trnt1	96	68.627	Hippocampus_comes
ENSMICG00000016615	TRNT1	96	68.750	ENSIPUG00000000971	trnt1	97	68.750	Ictalurus_punctatus
ENSMICG00000016615	TRNT1	100	89.171	ENSSTOG00000000150	TRNT1	98	94.059	Ictidomys_tridecemlineatus
ENSMICG00000016615	TRNT1	100	92.396	ENSJJAG00000018561	Trnt1	99	92.396	Jaculus_jaculus
ENSMICG00000016615	TRNT1	96	67.689	ENSKMAG00000011307	trnt1	99	67.689	Kryptolebias_marmoratus
ENSMICG00000016615	TRNT1	94	63.415	ENSLBEG00000019457	trnt1	97	63.415	Labrus_bergylta
ENSMICG00000016615	TRNT1	99	72.558	ENSLACG00000013227	TRNT1	99	72.558	Latimeria_chalumnae
ENSMICG00000016615	TRNT1	97	71.429	ENSLOCG00000011105	trnt1	95	71.429	Lepisosteus_oculatus
ENSMICG00000016615	TRNT1	100	94.240	ENSLAFG00000023191	TRNT1	100	94.240	Loxodonta_africana
ENSMICG00000016615	TRNT1	99	93.533	ENSMFAG00000045113	TRNT1	99	93.533	Macaca_fascicularis
ENSMICG00000016615	TRNT1	99	93.533	ENSMMUG00000017983	TRNT1	99	93.533	Macaca_mulatta
ENSMICG00000016615	TRNT1	99	93.533	ENSMNEG00000037805	TRNT1	99	93.533	Macaca_nemestrina
ENSMICG00000016615	TRNT1	88	94.764	ENSMLEG00000033671	TRNT1	99	94.764	Mandrillus_leucophaeus
ENSMICG00000016615	TRNT1	98	68.000	ENSMAMG00000023401	trnt1	99	68.000	Mastacembelus_armatus
ENSMICG00000016615	TRNT1	98	67.294	ENSMZEG00005009141	trnt1	99	67.294	Maylandia_zebra
ENSMICG00000016615	TRNT1	74	75.625	ENSMGAG00000009971	TRNT1	99	75.625	Meleagris_gallopavo
ENSMICG00000016615	TRNT1	100	92.627	ENSMAUG00000020707	Trnt1	100	92.627	Mesocricetus_auratus
ENSMICG00000016615	TRNT1	100	91.935	ENSMOCG00000004539	Trnt1	100	91.935	Microtus_ochrogaster
ENSMICG00000016615	TRNT1	96	68.193	ENSMMOG00000010742	trnt1	98	68.193	Mola_mola
ENSMICG00000016615	TRNT1	99	84.527	ENSMODG00000004368	TRNT1	99	84.527	Monodelphis_domestica
ENSMICG00000016615	TRNT1	98	67.059	ENSMALG00000008376	trnt1	99	67.059	Monopterus_albus
ENSMICG00000016615	TRNT1	99	93.256	MGP_CAROLIEiJ_G0028698	Trnt1	99	93.256	Mus_caroli
ENSMICG00000016615	TRNT1	99	93.256	ENSMUSG00000013736	Trnt1	99	93.256	Mus_musculus
ENSMICG00000016615	TRNT1	100	91.935	MGP_PahariEiJ_G0022449	Trnt1	100	92.611	Mus_pahari
ENSMICG00000016615	TRNT1	99	93.256	MGP_SPRETEiJ_G0029726	Trnt1	99	93.256	Mus_spretus
ENSMICG00000016615	TRNT1	100	92.166	ENSMPUG00000017017	TRNT1	99	92.166	Mustela_putorius_furo
ENSMICG00000016615	TRNT1	89	88.342	ENSMLUG00000011864	TRNT1	100	88.342	Myotis_lucifugus
ENSMICG00000016615	TRNT1	99	92.610	ENSNGAG00000000537	Trnt1	99	92.610	Nannospalax_galili
ENSMICG00000016615	TRNT1	79	67.246	ENSNBRG00000023606	trnt1	99	67.246	Neolamprologus_brichardi
ENSMICG00000016615	TRNT1	100	93.548	ENSNLEG00000003226	TRNT1	100	93.548	Nomascus_leucogenys
ENSMICG00000016615	TRNT1	99	84.296	ENSMEUG00000004684	TRNT1	99	84.296	Notamacropus_eugenii
ENSMICG00000016615	TRNT1	88	80.157	ENSOPRG00000015067	TRNT1	99	80.157	Ochotona_princeps
ENSMICG00000016615	TRNT1	99	91.224	ENSODEG00000007597	TRNT1	99	91.224	Octodon_degus
ENSMICG00000016615	TRNT1	98	67.765	ENSONIG00000020273	trnt1	98	67.765	Oreochromis_niloticus
ENSMICG00000016615	TRNT1	99	75.463	ENSOANG00000007514	TRNT1	99	75.463	Ornithorhynchus_anatinus
ENSMICG00000016615	TRNT1	100	85.484	ENSOCUG00000008580	TRNT1	99	85.484	Oryctolagus_cuniculus
ENSMICG00000016615	TRNT1	97	66.429	ENSORLG00000003165	trnt1	99	66.429	Oryzias_latipes
ENSMICG00000016615	TRNT1	97	66.905	ENSORLG00020022060	trnt1	99	66.905	Oryzias_latipes_hni
ENSMICG00000016615	TRNT1	97	66.429	ENSORLG00015018915	trnt1	99	66.429	Oryzias_latipes_hsok
ENSMICG00000016615	TRNT1	98	64.554	ENSOMEG00000003331	trnt1	99	64.554	Oryzias_melastigma
ENSMICG00000016615	TRNT1	100	91.014	ENSOARG00000008631	TRNT1	99	91.014	Ovis_aries
ENSMICG00000016615	TRNT1	100	92.857	ENSPPAG00000043566	TRNT1	100	92.857	Pan_paniscus
ENSMICG00000016615	TRNT1	99	91.455	ENSPPRG00000001327	TRNT1	99	91.455	Panthera_pardus
ENSMICG00000016615	TRNT1	100	91.244	ENSPTIG00000011448	TRNT1	99	91.244	Panthera_tigris_altaica
ENSMICG00000016615	TRNT1	100	92.857	ENSPTRG00000014564	TRNT1	100	92.857	Pan_troglodytes
ENSMICG00000016615	TRNT1	99	93.303	ENSPANG00000025944	TRNT1	99	93.303	Papio_anubis
ENSMICG00000016615	TRNT1	98	68.941	ENSPKIG00000020015	trnt1	98	68.941	Paramormyrops_kingsleyae
ENSMICG00000016615	TRNT1	91	80.856	ENSPSIG00000017356	TRNT1	99	82.778	Pelodiscus_sinensis
ENSMICG00000016615	TRNT1	98	66.353	ENSPMGG00000008888	trnt1	98	66.353	Periophthalmus_magnuspinnatus
ENSMICG00000016615	TRNT1	100	92.857	ENSPEMG00000019845	Trnt1	100	92.857	Peromyscus_maniculatus_bairdii
ENSMICG00000016615	TRNT1	99	84.296	ENSPCIG00000030436	TRNT1	99	84.296	Phascolarctos_cinereus
ENSMICG00000016615	TRNT1	94	69.363	ENSPFOG00000006194	trnt1	96	69.363	Poecilia_formosa
ENSMICG00000016615	TRNT1	94	69.363	ENSPLAG00000015623	trnt1	99	69.231	Poecilia_latipinna
ENSMICG00000016615	TRNT1	94	69.363	ENSPMEG00000012216	trnt1	99	69.231	Poecilia_mexicana
ENSMICG00000016615	TRNT1	94	69.268	ENSPREG00000021470	trnt1	96	69.268	Poecilia_reticulata
ENSMICG00000016615	TRNT1	100	93.779	ENSPPYG00000013702	TRNT1	100	93.779	Pongo_abelii
ENSMICG00000016615	TRNT1	88	92.950	ENSPCAG00000001951	TRNT1	100	92.950	Procavia_capensis
ENSMICG00000016615	TRNT1	100	96.083	ENSPCOG00000022228	TRNT1	100	96.083	Propithecus_coquereli
ENSMICG00000016615	TRNT1	88	91.146	ENSPVAG00000008784	TRNT1	100	91.146	Pteropus_vampyrus
ENSMICG00000016615	TRNT1	98	67.294	ENSPNYG00000003120	trnt1	99	67.294	Pundamilia_nyererei
ENSMICG00000016615	TRNT1	97	68.095	ENSPNAG00000000565	trnt1	96	68.095	Pygocentrus_nattereri
ENSMICG00000016615	TRNT1	99	93.256	ENSRNOG00000006432	Trnt1	99	93.256	Rattus_norvegicus
ENSMICG00000016615	TRNT1	100	91.014	ENSRBIG00000042632	TRNT1	100	91.014	Rhinopithecus_bieti
ENSMICG00000016615	TRNT1	100	92.857	ENSRROG00000036866	TRNT1	100	92.857	Rhinopithecus_roxellana
ENSMICG00000016615	TRNT1	100	92.627	ENSSBOG00000021208	TRNT1	100	92.627	Saimiri_boliviensis_boliviensis
ENSMICG00000016615	TRNT1	99	83.603	ENSSHAG00000018861	TRNT1	99	83.603	Sarcophilus_harrisii
ENSMICG00000016615	TRNT1	94	71.007	ENSSFOG00015020844	trnt1	94	71.007	Scleropages_formosus
ENSMICG00000016615	TRNT1	98	67.529	ENSSMAG00000015432	trnt1	97	67.529	Scophthalmus_maximus
ENSMICG00000016615	TRNT1	98	66.824	ENSSDUG00000012320	trnt1	99	66.824	Seriola_dumerili
ENSMICG00000016615	TRNT1	98	66.824	ENSSLDG00000009325	trnt1	99	66.824	Seriola_lalandi_dorsalis
ENSMICG00000016615	TRNT1	56	64.315	ENSSLDG00000016463	-	91	64.435	Seriola_lalandi_dorsalis
ENSMICG00000016615	TRNT1	88	81.462	ENSSPUG00000014153	TRNT1	99	81.462	Sphenodon_punctatus
ENSMICG00000016615	TRNT1	98	67.059	ENSSPAG00000021005	trnt1	99	67.059	Stegastes_partitus
ENSMICG00000016615	TRNT1	100	92.627	ENSSSCG00000011529	TRNT1	100	92.627	Sus_scrofa
ENSMICG00000016615	TRNT1	93	75.556	ENSTGUG00000010192	TRNT1	99	75.556	Taeniopygia_guttata
ENSMICG00000016615	TRNT1	98	68.000	ENSTRUG00000001088	trnt1	99	68.000	Takifugu_rubripes
ENSMICG00000016615	TRNT1	99	67.056	ENSTNIG00000007363	trnt1	99	67.056	Tetraodon_nigroviridis
ENSMICG00000016615	TRNT1	70	77.154	ENSTBEG00000006367	TRNT1	100	77.154	Tupaia_belangeri
ENSMICG00000016615	TRNT1	100	91.705	ENSTTRG00000007803	TRNT1	100	91.705	Tursiops_truncatus
ENSMICG00000016615	TRNT1	100	91.244	ENSUAMG00000022574	TRNT1	99	91.244	Ursus_americanus
ENSMICG00000016615	TRNT1	100	91.244	ENSUMAG00000024092	TRNT1	99	91.244	Ursus_maritimus
ENSMICG00000016615	TRNT1	100	91.244	ENSVVUG00000012810	TRNT1	99	91.244	Vulpes_vulpes
ENSMICG00000016615	TRNT1	95	65.385	ENSXETG00000025091	trnt1	99	66.169	Xenopus_tropicalis
ENSMICG00000016615	TRNT1	94	69.363	ENSXCOG00000010150	trnt1	96	69.363	Xiphophorus_couchianus
ENSMICG00000016615	TRNT1	94	69.118	ENSXMAG00000002227	trnt1	96	69.118	Xiphophorus_maculatus