EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000016679 (Gene tree)
Gene ID: 105875532
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 176616 bases
Position: chr20:69683327-69859942
Accession: 105875532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000015263	ResIII	PF04851.15	7.1e-06	1	1
ENSMICP00000021252	BRK	PF07533.16	1.3e-31	1	2
ENSMICP00000021252	BRK	PF07533.16	1.3e-31	2	2
ENSMICP00000015263	BRK	PF07533.16	1.5e-30	1	2
ENSMICP00000015263	BRK	PF07533.16	1.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000016750	CHD9-201	11564	XM_012772629	ENSMICP00000015263	2884 (aa)	XP_012628083	UPI00098BC5F9
ENSMICT00000041974	CHD9-202	2892	-	ENSMICP00000021252	963 (aa)	-	UPI000C2ECEA6

Gene Model

Click here to download ENSMICG00000016679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000016679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000016679	CHD9	86	71.228	ENSMICG00000002430	CHD7	84	67.356
ENSMICG00000016679	CHD9	90	46.309	ENSMICG00000016641	CHD6	99	71.560
ENSMICG00000016679	CHD9	69	68.559	ENSMICG00000007735	CHD8	84	68.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000016679	CHD9	100	97.070	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSMICG00000016679	CHD9	91	69.718	ENSAPOG00000023034	chd9	66	75.179	Acanthochromis_polyacanthus
ENSMICG00000016679	CHD9	100	97.436	ENSAMEG00000016232	CHD9	100	96.417	Ailuropoda_melanoleuca
ENSMICG00000016679	CHD9	92	70.833	ENSACIG00000004097	chd9	73	61.907	Amphilophus_citrinellus
ENSMICG00000016679	CHD9	91	70.070	ENSAOCG00000005487	chd9	67	75.239	Amphiprion_ocellaris
ENSMICG00000016679	CHD9	91	70.070	ENSAPEG00000009859	chd9	67	75.179	Amphiprion_percula
ENSMICG00000016679	CHD9	91	72.242	ENSATEG00000002748	chd9	98	63.748	Anabas_testudineus
ENSMICG00000016679	CHD9	98	91.209	ENSAPLG00000002826	CHD9	74	86.110	Anas_platyrhynchos
ENSMICG00000016679	CHD9	98	88.278	ENSACAG00000016150	CHD9	98	81.574	Anolis_carolinensis
ENSMICG00000016679	CHD9	100	96.703	ENSANAG00000015630	CHD9	100	96.703	Aotus_nancymaae
ENSMICG00000016679	CHD9	92	69.178	ENSACLG00000016899	chd9	73	63.329	Astatotilapia_calliptera
ENSMICG00000016679	CHD9	98	71.579	ENSAMXG00000005652	chd9	68	75.030	Astyanax_mexicanus
ENSMICG00000016679	CHD9	100	97.436	ENSBTAG00000002287	CHD9	100	96.534	Bos_taurus
ENSMICG00000016679	CHD9	100	97.070	ENSCJAG00000001573	CHD9	100	97.070	Callithrix_jacchus
ENSMICG00000016679	CHD9	100	98.168	ENSCAFG00000009699	CHD9	100	96.451	Canis_familiaris
ENSMICG00000016679	CHD9	100	98.168	ENSCAFG00020002879	CHD9	100	98.168	Canis_lupus_dingo
ENSMICG00000016679	CHD9	100	97.802	ENSTSYG00000007693	CHD9	100	97.802	Carlito_syrichta
ENSMICG00000016679	CHD9	77	95.161	ENSCAPG00000011604	CHD9	81	80.185	Cavia_aperea
ENSMICG00000016679	CHD9	100	97.436	ENSCPOG00000036544	CHD9	100	91.041	Cavia_porcellus
ENSMICG00000016679	CHD9	100	97.020	ENSCCAG00000036178	CHD9	100	97.020	Cebus_capucinus
ENSMICG00000016679	CHD9	100	97.070	ENSCATG00000036753	CHD9	100	97.070	Cercocebus_atys
ENSMICG00000016679	CHD9	98	98.535	ENSCLAG00000007137	CHD9	99	97.688	Chinchilla_lanigera
ENSMICG00000016679	CHD9	100	97.070	ENSCSAG00000005311	CHD9	100	96.247	Chlorocebus_sabaeus
ENSMICG00000016679	CHD9	73	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSMICG00000016679	CHD9	98	87.179	ENSCPBG00000012459	CHD9	99	91.763	Chrysemys_picta_bellii
ENSMICG00000016679	CHD9	100	97.070	ENSCANG00000030349	CHD9	100	97.070	Colobus_angolensis_palliatus
ENSMICG00000016679	CHD9	98	95.238	ENSCGRG00001016150	Chd9	99	91.557	Cricetulus_griseus_chok1gshd
ENSMICG00000016679	CHD9	98	95.238	ENSCGRG00000012850	Chd9	99	96.763	Cricetulus_griseus_crigri
ENSMICG00000016679	CHD9	92	69.204	ENSCSEG00000009209	chd9	67	72.305	Cynoglossus_semilaevis
ENSMICG00000016679	CHD9	91	69.521	ENSCVAG00000016195	chd9	73	62.478	Cyprinodon_variegatus
ENSMICG00000016679	CHD9	98	69.718	ENSDARG00000074498	chd9	68	73.965	Danio_rerio
ENSMICG00000016679	CHD9	100	94.872	ENSDNOG00000006045	CHD9	100	94.643	Dasypus_novemcinctus
ENSMICG00000016679	CHD9	100	93.773	ENSDORG00000008523	-	100	93.753	Dipodomys_ordii
ENSMICG00000016679	CHD9	92	98.438	ENSETEG00000009565	CHD9	94	96.316	Echinops_telfairi
ENSMICG00000016679	CHD9	100	96.175	ENSEASG00005014832	CHD9	100	96.175	Equus_asinus_asinus
ENSMICG00000016679	CHD9	100	97.802	ENSECAG00000011505	CHD9	100	96.107	Equus_caballus
ENSMICG00000016679	CHD9	81	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSMICG00000016679	CHD9	94	71.579	ENSELUG00000006031	chd9	90	70.828	Esox_lucius
ENSMICG00000016679	CHD9	100	97.802	ENSFCAG00000022534	CHD9	100	97.802	Felis_catus
ENSMICG00000016679	CHD9	98	90.110	ENSFALG00000013276	CHD9	99	87.662	Ficedula_albicollis
ENSMICG00000016679	CHD9	100	98.168	ENSFDAG00000021037	CHD9	100	94.312	Fukomys_damarensis
ENSMICG00000016679	CHD9	91	69.258	ENSFHEG00000006068	chd9	68	74.776	Fundulus_heteroclitus
ENSMICG00000016679	CHD9	81	70.035	ENSGMOG00000006040	chd9	81	76.934	Gadus_morhua
ENSMICG00000016679	CHD9	95	84.829	ENSGALG00000039178	CHD9	98	85.153	Gallus_gallus
ENSMICG00000016679	CHD9	91	69.930	ENSGAFG00000010014	chd9	98	68.697	Gambusia_affinis
ENSMICG00000016679	CHD9	91	68.182	ENSGACG00000016694	chd9	96	74.893	Gasterosteus_aculeatus
ENSMICG00000016679	CHD9	98	83.439	ENSGAGG00000001048	-	98	87.546	Gopherus_agassizii
ENSMICG00000016679	CHD9	100	97.436	ENSGGOG00000014816	CHD9	100	97.436	Gorilla_gorilla
ENSMICG00000016679	CHD9	91	70.877	ENSHBUG00000023322	chd9	96	70.629	Haplochromis_burtoni
ENSMICG00000016679	CHD9	100	98.168	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSMICG00000016679	CHD9	100	92.324	ENSHGLG00100007620	-	100	93.407	Heterocephalus_glaber_male
ENSMICG00000016679	CHD9	91	70.242	ENSHCOG00000000937	chd9	69	73.463	Hippocampus_comes
ENSMICG00000016679	CHD9	92	73.358	ENSIPUG00000016448	chd9	97	74.453	Ictalurus_punctatus
ENSMICG00000016679	CHD9	100	97.070	ENSSTOG00000022273	CHD9	99	98.497	Ictidomys_tridecemlineatus
ENSMICG00000016679	CHD9	100	96.337	ENSJJAG00000015741	-	100	95.291	Jaculus_jaculus
ENSMICG00000016679	CHD9	91	72.085	ENSKMAG00000016784	chd9	96	60.907	Kryptolebias_marmoratus
ENSMICG00000016679	CHD9	91	70.070	ENSLBEG00000012077	chd9	98	67.805	Labrus_bergylta
ENSMICG00000016679	CHD9	98	73.214	ENSLACG00000005557	CHD9	73	72.323	Latimeria_chalumnae
ENSMICG00000016679	CHD9	98	76.786	ENSLOCG00000007225	chd9	68	80.012	Lepisosteus_oculatus
ENSMICG00000016679	CHD9	100	95.238	ENSLAFG00000015374	CHD9	100	94.592	Loxodonta_africana
ENSMICG00000016679	CHD9	100	97.070	ENSMFAG00000041354	CHD9	100	97.070	Macaca_fascicularis
ENSMICG00000016679	CHD9	100	97.070	ENSMMUG00000016310	CHD9	100	97.070	Macaca_mulatta
ENSMICG00000016679	CHD9	100	96.703	ENSMNEG00000031494	CHD9	100	96.329	Macaca_nemestrina
ENSMICG00000016679	CHD9	100	97.070	ENSMLEG00000043219	CHD9	100	97.070	Mandrillus_leucophaeus
ENSMICG00000016679	CHD9	91	70.070	ENSMAMG00000003909	chd9	96	61.704	Mastacembelus_armatus
ENSMICG00000016679	CHD9	91	70.877	ENSMZEG00005006581	chd9	67	75.672	Maylandia_zebra
ENSMICG00000016679	CHD9	98	91.575	ENSMGAG00000004642	CHD9	72	80.952	Meleagris_gallopavo
ENSMICG00000016679	CHD9	95	90.978	ENSMAUG00000000526	-	98	95.200	Mesocricetus_auratus
ENSMICG00000016679	CHD9	98	92.136	ENSMOCG00000010691	-	98	94.872	Microtus_ochrogaster
ENSMICG00000016679	CHD9	91	71.025	ENSMMOG00000016406	chd9	74	62.869	Mola_mola
ENSMICG00000016679	CHD9	98	84.615	ENSMODG00000013142	-	99	92.380	Monodelphis_domestica
ENSMICG00000016679	CHD9	91	64.360	ENSMALG00000013306	chd9	73	62.096	Monopterus_albus
ENSMICG00000016679	CHD9	98	94.872	MGP_CAROLIEiJ_G0031364	Chd9	99	90.614	Mus_caroli
ENSMICG00000016679	CHD9	98	94.505	ENSMUSG00000056608	Chd9	99	95.838	Mus_musculus
ENSMICG00000016679	CHD9	98	95.238	MGP_PahariEiJ_G0022964	Chd9	99	89.090	Mus_pahari
ENSMICG00000016679	CHD9	98	94.505	MGP_SPRETEiJ_G0032483	Chd9	99	90.639	Mus_spretus
ENSMICG00000016679	CHD9	100	97.802	ENSMPUG00000003285	CHD9	100	96.312	Mustela_putorius_furo
ENSMICG00000016679	CHD9	100	97.436	ENSMLUG00000004456	CHD9	100	93.657	Myotis_lucifugus
ENSMICG00000016679	CHD9	100	92.420	ENSNGAG00000015820	-	100	95.971	Nannospalax_galili
ENSMICG00000016679	CHD9	92	70.486	ENSNBRG00000009423	chd9	67	75.537	Neolamprologus_brichardi
ENSMICG00000016679	CHD9	90	96.435	ENSNLEG00000001026	CHD9	100	96.435	Nomascus_leucogenys
ENSMICG00000016679	CHD9	76	96.732	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSMICG00000016679	CHD9	87	98.529	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSMICG00000016679	CHD9	98	97.080	ENSODEG00000004466	CHD9	99	94.171	Octodon_degus
ENSMICG00000016679	CHD9	92	70.526	ENSONIG00000002816	chd9	87	63.205	Oreochromis_niloticus
ENSMICG00000016679	CHD9	100	92.364	ENSOANG00000013401	CHD9	100	86.270	Ornithorhynchus_anatinus
ENSMICG00000016679	CHD9	100	96.703	ENSOCUG00000001016	CHD9	99	96.856	Oryctolagus_cuniculus
ENSMICG00000016679	CHD9	92	70.423	ENSORLG00000013810	chd9	67	74.910	Oryzias_latipes
ENSMICG00000016679	CHD9	92	73.646	ENSORLG00020020665	chd9	75	63.227	Oryzias_latipes_hni
ENSMICG00000016679	CHD9	92	70.732	ENSORLG00015019126	chd9	81	62.586	Oryzias_latipes_hsok
ENSMICG00000016679	CHD9	100	97.436	ENSOGAG00000002110	CHD9	100	95.832	Otolemur_garnettii
ENSMICG00000016679	CHD9	100	96.377	ENSOARG00000017664	CHD9	100	95.731	Ovis_aries
ENSMICG00000016679	CHD9	100	97.436	ENSPPAG00000039388	-	100	95.851	Pan_paniscus
ENSMICG00000016679	CHD9	100	97.436	ENSPPRG00000004801	CHD9	100	97.436	Panthera_pardus
ENSMICG00000016679	CHD9	100	95.533	ENSPTIG00000021854	CHD9	100	94.967	Panthera_tigris_altaica
ENSMICG00000016679	CHD9	100	97.436	ENSPTRG00000008113	CHD9	100	97.436	Pan_troglodytes
ENSMICG00000016679	CHD9	100	97.070	ENSPANG00000019307	CHD9	100	97.070	Papio_anubis
ENSMICG00000016679	CHD9	90	73.214	ENSPKIG00000021876	chd9	68	76.882	Paramormyrops_kingsleyae
ENSMICG00000016679	CHD9	94	70.863	ENSPKIG00000025401	-	71	62.963	Paramormyrops_kingsleyae
ENSMICG00000016679	CHD9	64	85.351	ENSPSIG00000008099	CHD9	99	85.297	Pelodiscus_sinensis
ENSMICG00000016679	CHD9	92	63.274	ENSPMGG00000021802	chd9	98	72.500	Periophthalmus_magnuspinnatus
ENSMICG00000016679	CHD9	98	91.073	ENSPEMG00000021464	-	98	95.971	Peromyscus_maniculatus_bairdii
ENSMICG00000016679	CHD9	65	61.905	ENSPMAG00000006035	-	72	67.900	Petromyzon_marinus
ENSMICG00000016679	CHD9	89	87.350	ENSPCIG00000017215	CHD9	97	90.145	Phascolarctos_cinereus
ENSMICG00000016679	CHD9	91	69.580	ENSPFOG00000015839	chd9	99	60.572	Poecilia_formosa
ENSMICG00000016679	CHD9	91	70.318	ENSPLAG00000011118	chd9	98	68.856	Poecilia_latipinna
ENSMICG00000016679	CHD9	91	69.896	ENSPMEG00000015106	chd9	99	60.567	Poecilia_mexicana
ENSMICG00000016679	CHD9	91	70.318	ENSPREG00000006473	chd9	98	68.664	Poecilia_reticulata
ENSMICG00000016679	CHD9	100	97.070	ENSPPYG00000007348	CHD9	100	96.450	Pongo_abelii
ENSMICG00000016679	CHD9	78	96.232	ENSPCAG00000007564	CHD9	86	96.232	Procavia_capensis
ENSMICG00000016679	CHD9	100	98.901	ENSPCOG00000028433	CHD9	100	98.901	Propithecus_coquereli
ENSMICG00000016679	CHD9	97	93.455	ENSPVAG00000015617	CHD9	98	93.402	Pteropus_vampyrus
ENSMICG00000016679	CHD9	91	70.877	ENSPNYG00000010947	chd9	66	75.537	Pundamilia_nyererei
ENSMICG00000016679	CHD9	92	72.000	ENSPNAG00000024141	chd9	68	75.105	Pygocentrus_nattereri
ENSMICG00000016679	CHD9	88	93.220	ENSRNOG00000049302	Chd9	100	90.603	Rattus_norvegicus
ENSMICG00000016679	CHD9	100	97.070	ENSRBIG00000035553	CHD9	100	97.070	Rhinopithecus_bieti
ENSMICG00000016679	CHD9	100	97.070	ENSRROG00000033278	CHD9	100	97.070	Rhinopithecus_roxellana
ENSMICG00000016679	CHD9	100	96.416	ENSSBOG00000030240	CHD9	100	96.416	Saimiri_boliviensis_boliviensis
ENSMICG00000016679	CHD9	98	91.636	ENSSHAG00000002719	CHD9	100	87.650	Sarcophilus_harrisii
ENSMICG00000016679	CHD9	92	72.857	ENSSFOG00015020209	chd9	99	70.447	Scleropages_formosus
ENSMICG00000016679	CHD9	93	71.326	ENSSFOG00015001327	chd9	67	75.636	Scleropages_formosus
ENSMICG00000016679	CHD9	91	68.881	ENSSMAG00000008953	chd9	99	62.774	Scophthalmus_maximus
ENSMICG00000016679	CHD9	91	71.479	ENSSDUG00000006139	chd9	95	70.042	Seriola_dumerili
ENSMICG00000016679	CHD9	91	72.340	ENSSLDG00000017818	chd9	98	68.770	Seriola_lalandi_dorsalis
ENSMICG00000016679	CHD9	100	94.964	ENSSARG00000010632	CHD9	71	97.860	Sorex_araneus
ENSMICG00000016679	CHD9	98	85.881	ENSSPUG00000017465	-	98	92.308	Sphenodon_punctatus
ENSMICG00000016679	CHD9	91	69.718	ENSSPAG00000021649	chd9	67	74.896	Stegastes_partitus
ENSMICG00000016679	CHD9	98	97.436	ENSSSCG00000033591	CHD9	75	96.582	Sus_scrofa
ENSMICG00000016679	CHD9	90	84.971	ENSTGUG00000007476	CHD9	100	85.315	Taeniopygia_guttata
ENSMICG00000016679	CHD9	97	73.214	ENSTRUG00000009125	chd9	73	62.750	Takifugu_rubripes
ENSMICG00000016679	CHD9	75	68.310	ENSTNIG00000003825	chd9	86	79.439	Tetraodon_nigroviridis
ENSMICG00000016679	CHD9	64	97.297	ENSTBEG00000016052	-	78	97.297	Tupaia_belangeri
ENSMICG00000016679	CHD9	90	95.401	ENSTTRG00000012674	CHD9	90	95.401	Tursiops_truncatus
ENSMICG00000016679	CHD9	100	98.168	ENSUAMG00000022706	CHD9	100	98.168	Ursus_americanus
ENSMICG00000016679	CHD9	90	94.194	ENSUMAG00000004043	CHD9	99	98.507	Ursus_maritimus
ENSMICG00000016679	CHD9	98	96.703	ENSVPAG00000001374	CHD9	97	94.908	Vicugna_pacos
ENSMICG00000016679	CHD9	100	98.168	ENSVVUG00000019435	CHD9	100	96.451	Vulpes_vulpes
ENSMICG00000016679	CHD9	98	80.952	ENSXETG00000000349	chd9	96	76.996	Xenopus_tropicalis
ENSMICG00000016679	CHD9	91	70.318	ENSXCOG00000012997	chd9	98	69.015	Xiphophorus_couchianus
ENSMICG00000016679	CHD9	91	69.930	ENSXMAG00000016192	chd9	98	68.737	Xiphophorus_maculatus