EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000016883 (Gene tree)
Gene ID: 105859846
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC105859846
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 36373 bases
Position: chr13:77800932-77837304
Accession: 105859846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000015381	RNA_pol_L_2	PF13656.6	6e-28	1	1
ENSMICP00000015381	RNA_pol_L	PF01193.24	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000016879	-	794	XM_012744055	ENSMICP00000015381	133 (aa)	XP_012599509	UPI000643E6A6
ENSMICT00000061191	-	530	XM_012744057	ENSMICP00000040500	122 (aa)	XP_012599511	UPI00064324D1

Gene Model

Click here to download ENSMICG00000016883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000016883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000016883	-	83	30.909	ENSMICG00000010323	-	85	33.981
ENSMICG00000016883	-	99	80.303	ENSMICG00000007349	-	100	80.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000016883	-	100	96.992	ENSG00000186184	POLR1D	100	96.992	Homo_sapiens
ENSMICG00000016883	-	83	65.766	ENSAPOG00000021882	polr1d	98	65.766	Acanthochromis_polyacanthus
ENSMICG00000016883	-	94	96.800	ENSAMEG00000019095	POLR1D	100	96.800	Ailuropoda_melanoleuca
ENSMICG00000016883	-	80	70.370	ENSACIG00000013328	polr1d	94	70.370	Amphilophus_citrinellus
ENSMICG00000016883	-	84	66.071	ENSAOCG00000018500	polr1d	98	66.071	Amphiprion_ocellaris
ENSMICG00000016883	-	84	65.179	ENSAPEG00000009489	polr1d	98	65.179	Amphiprion_percula
ENSMICG00000016883	-	80	66.355	ENSATEG00000019322	polr1d	94	66.355	Anabas_testudineus
ENSMICG00000016883	-	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSMICG00000016883	-	100	96.992	ENSANAG00000024486	POLR1D	100	96.992	Aotus_nancymaae
ENSMICG00000016883	-	77	73.529	ENSACLG00000023805	polr1d	94	70.093	Astatotilapia_calliptera
ENSMICG00000016883	-	80	67.925	ENSAMXG00000036118	polr1d	92	67.925	Astyanax_mexicanus
ENSMICG00000016883	-	100	94.737	ENSBTAG00000008642	POLR1D	100	94.737	Bos_taurus
ENSMICG00000016883	-	100	94.737	ENSBTAG00000033252	-	100	94.737	Bos_taurus
ENSMICG00000016883	-	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSMICG00000016883	-	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSMICG00000016883	-	100	96.992	ENSCAFG00000006755	POLR1D	100	96.992	Canis_familiaris
ENSMICG00000016883	-	100	95.489	ENSCHIG00000021910	POLR1D	100	95.489	Capra_hircus
ENSMICG00000016883	-	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSMICG00000016883	-	96	81.538	ENSTSYG00000034852	-	98	81.513	Carlito_syrichta
ENSMICG00000016883	-	96	55.469	ENSCAPG00000006058	-	99	55.469	Cavia_aperea
ENSMICG00000016883	-	96	56.250	ENSCPOG00000030450	-	99	56.250	Cavia_porcellus
ENSMICG00000016883	-	100	95.489	ENSCCAG00000021349	-	100	95.489	Cebus_capucinus
ENSMICG00000016883	-	100	77.444	ENSCCAG00000020191	-	100	77.444	Cebus_capucinus
ENSMICG00000016883	-	100	84.962	ENSCATG00000022900	-	100	84.962	Cercocebus_atys
ENSMICG00000016883	-	100	95.489	ENSCATG00000030710	-	100	95.489	Cercocebus_atys
ENSMICG00000016883	-	93	95.968	ENSCLAG00000017623	POLR1D	100	95.968	Chinchilla_lanigera
ENSMICG00000016883	-	73	79.381	ENSCPBG00000004719	POLR1D	96	79.381	Chrysemys_picta_bellii
ENSMICG00000016883	-	100	95.489	ENSCANG00000028632	-	100	95.489	Colobus_angolensis_palliatus
ENSMICG00000016883	-	100	92.481	ENSCANG00000037694	-	100	92.481	Colobus_angolensis_palliatus
ENSMICG00000016883	-	100	93.985	ENSCGRG00001021251	Polr1d	100	93.985	Cricetulus_griseus_chok1gshd
ENSMICG00000016883	-	100	93.985	ENSCGRG00000011639	Polr1d	100	93.985	Cricetulus_griseus_crigri
ENSMICG00000016883	-	78	69.231	ENSCSEG00000018268	polr1d	91	68.224	Cynoglossus_semilaevis
ENSMICG00000016883	-	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSMICG00000016883	-	83	65.455	ENSDARG00000037570	polr1d	98	65.455	Danio_rerio
ENSMICG00000016883	-	100	91.791	ENSDNOG00000046247	-	100	91.791	Dasypus_novemcinctus
ENSMICG00000016883	-	100	93.985	ENSDNOG00000043676	-	100	93.985	Dasypus_novemcinctus
ENSMICG00000016883	-	100	93.985	ENSDORG00000029155	Polr1d	100	93.985	Dipodomys_ordii
ENSMICG00000016883	-	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSMICG00000016883	-	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSMICG00000016883	-	65	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSMICG00000016883	-	96	96.094	ENSEASG00005022487	POLR1D	99	96.094	Equus_asinus_asinus
ENSMICG00000016883	-	93	95.161	ENSEEUG00000013144	POLR1D	100	95.161	Erinaceus_europaeus
ENSMICG00000016883	-	80	69.811	ENSELUG00000005105	rpac2	93	69.811	Esox_lucius
ENSMICG00000016883	-	100	96.241	ENSFCAG00000030162	POLR1D	100	96.241	Felis_catus
ENSMICG00000016883	-	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSMICG00000016883	-	100	96.241	ENSFDAG00000004463	POLR1D	100	96.241	Fukomys_damarensis
ENSMICG00000016883	-	80	73.148	ENSFHEG00000015410	polr1d	94	73.148	Fundulus_heteroclitus
ENSMICG00000016883	-	79	71.429	ENSGAFG00000001693	polr1d	92	71.429	Gambusia_affinis
ENSMICG00000016883	-	86	68.103	ENSGACG00000018585	polr1d	98	68.103	Gasterosteus_aculeatus
ENSMICG00000016883	-	81	77.778	ENSGAGG00000008503	POLR1D	95	77.778	Gopherus_agassizii
ENSMICG00000016883	-	100	96.992	ENSGGOG00000004235	POLR1D	100	96.992	Gorilla_gorilla
ENSMICG00000016883	-	80	70.093	ENSHBUG00000002111	polr1d	94	70.093	Haplochromis_burtoni
ENSMICG00000016883	-	100	96.241	ENSHGLG00000003202	POLR1D	100	96.241	Heterocephalus_glaber_female
ENSMICG00000016883	-	100	96.241	ENSHGLG00100009393	POLR1D	100	96.241	Heterocephalus_glaber_male
ENSMICG00000016883	-	80	68.224	ENSHCOG00000003258	polr1d	94	68.224	Hippocampus_comes
ENSMICG00000016883	-	82	70.642	ENSIPUG00000014810	polr1d	95	70.642	Ictalurus_punctatus
ENSMICG00000016883	-	100	97.744	ENSSTOG00000013877	POLR1D	100	97.744	Ictidomys_tridecemlineatus
ENSMICG00000016883	-	95	73.810	ENSJJAG00000021667	-	75	73.810	Jaculus_jaculus
ENSMICG00000016883	-	95	90.769	ENSJJAG00000022671	-	98	94.017	Jaculus_jaculus
ENSMICG00000016883	-	80	66.038	ENSKMAG00000015256	polr1d	93	66.038	Kryptolebias_marmoratus
ENSMICG00000016883	-	79	71.429	ENSLBEG00000015919	polr1d	92	71.429	Labrus_bergylta
ENSMICG00000016883	-	87	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSMICG00000016883	-	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSMICG00000016883	-	100	87.970	ENSLAFG00000032290	POLR1D	100	87.970	Loxodonta_africana
ENSMICG00000016883	-	94	95.200	ENSMFAG00000045264	POLR1D	97	95.200	Macaca_fascicularis
ENSMICG00000016883	-	87	95.690	ENSMMUG00000020386	POLR1D	100	95.690	Macaca_mulatta
ENSMICG00000016883	-	100	76.692	ENSMMUG00000041570	-	100	76.692	Macaca_mulatta
ENSMICG00000016883	-	100	79.699	ENSMNEG00000038120	-	100	79.699	Macaca_nemestrina
ENSMICG00000016883	-	100	96.241	ENSMNEG00000008630	-	100	96.241	Macaca_nemestrina
ENSMICG00000016883	-	100	85.714	ENSMLEG00000032251	-	100	85.714	Mandrillus_leucophaeus
ENSMICG00000016883	-	100	96.241	ENSMLEG00000041048	-	100	96.241	Mandrillus_leucophaeus
ENSMICG00000016883	-	76	70.297	ENSMAMG00000014834	polr1d	94	70.297	Mastacembelus_armatus
ENSMICG00000016883	-	77	73.529	ENSMZEG00005006638	polr1d	90	73.529	Maylandia_zebra
ENSMICG00000016883	-	69	77.174	ENSMGAG00000005322	POLR1D	84	77.174	Meleagris_gallopavo
ENSMICG00000016883	-	100	93.985	ENSMAUG00000001946	Polr1d	100	93.985	Mesocricetus_auratus
ENSMICG00000016883	-	100	94.737	ENSMOCG00000021288	Polr1d	100	94.737	Microtus_ochrogaster
ENSMICG00000016883	-	80	67.290	ENSMMOG00000009605	polr1d	94	67.290	Mola_mola
ENSMICG00000016883	-	80	83.962	ENSMODG00000023881	POLR1D	93	83.962	Monodelphis_domestica
ENSMICG00000016883	-	80	66.355	ENSMALG00000010652	polr1d	94	66.355	Monopterus_albus
ENSMICG00000016883	-	100	89.474	MGP_CAROLIEiJ_G0028034	Polr1d	100	89.474	Mus_caroli
ENSMICG00000016883	-	100	89.474	ENSMUSG00000029642	Polr1d	100	89.474	Mus_musculus
ENSMICG00000016883	-	100	88.722	MGP_PahariEiJ_G0024600	Polr1d	100	88.722	Mus_pahari
ENSMICG00000016883	-	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSMICG00000016883	-	99	84.848	ENSMLUG00000004118	-	99	84.848	Myotis_lucifugus
ENSMICG00000016883	-	100	94.737	ENSMLUG00000027169	-	100	94.737	Myotis_lucifugus
ENSMICG00000016883	-	87	94.828	ENSNGAG00000006014	Polr1d	100	94.828	Nannospalax_galili
ENSMICG00000016883	-	80	70.093	ENSNBRG00000020327	polr1d	94	70.093	Neolamprologus_brichardi
ENSMICG00000016883	-	100	96.992	ENSNLEG00000000358	POLR1D	100	96.992	Nomascus_leucogenys
ENSMICG00000016883	-	100	80.451	ENSODEG00000014801	-	100	80.451	Octodon_degus
ENSMICG00000016883	-	100	94.737	ENSODEG00000005294	-	100	94.737	Octodon_degus
ENSMICG00000016883	-	79	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSMICG00000016883	-	100	96.241	ENSOCUG00000015706	POLR1D	82	96.241	Oryctolagus_cuniculus
ENSMICG00000016883	-	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSMICG00000016883	-	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSMICG00000016883	-	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSMICG00000016883	-	91	64.463	ENSOMEG00000014912	polr1d	81	64.463	Oryzias_melastigma
ENSMICG00000016883	-	100	96.992	ENSOGAG00000014601	POLR1D	100	96.992	Otolemur_garnettii
ENSMICG00000016883	-	94	95.200	ENSOARG00000017005	POLR1D	96	95.200	Ovis_aries
ENSMICG00000016883	-	100	95.489	ENSPPAG00000028138	POLR1D	100	95.489	Pan_paniscus
ENSMICG00000016883	-	99	96.970	ENSPPRG00000003381	POLR1D	99	96.970	Panthera_pardus
ENSMICG00000016883	-	93	95.968	ENSPTIG00000018137	POLR1D	93	95.968	Panthera_tigris_altaica
ENSMICG00000016883	-	100	96.992	ENSPTRG00000005734	POLR1D	100	96.992	Pan_troglodytes
ENSMICG00000016883	-	100	84.962	ENSPANG00000035051	-	100	84.962	Papio_anubis
ENSMICG00000016883	-	100	96.241	ENSPANG00000020259	-	100	96.241	Papio_anubis
ENSMICG00000016883	-	86	61.739	ENSPKIG00000021891	polr1d	90	51.754	Paramormyrops_kingsleyae
ENSMICG00000016883	-	87	73.504	ENSPSIG00000011822	POLR1D	91	73.504	Pelodiscus_sinensis
ENSMICG00000016883	-	84	66.964	ENSPMGG00000010359	polr1d	97	66.964	Periophthalmus_magnuspinnatus
ENSMICG00000016883	-	93	57.600	ENSPMGG00000012998	POLR1D	93	57.600	Periophthalmus_magnuspinnatus
ENSMICG00000016883	-	100	90.226	ENSPEMG00000006336	-	100	90.226	Peromyscus_maniculatus_bairdii
ENSMICG00000016883	-	82	58.716	ENSPMAG00000004228	polr1d	92	58.716	Petromyzon_marinus
ENSMICG00000016883	-	80	83.962	ENSPCIG00000001673	POLR1D	93	83.962	Phascolarctos_cinereus
ENSMICG00000016883	-	79	71.429	ENSPFOG00000023343	polr1d	92	72.500	Poecilia_formosa
ENSMICG00000016883	-	79	71.429	ENSPLAG00000009675	polr1d	92	71.429	Poecilia_latipinna
ENSMICG00000016883	-	79	71.429	ENSPMEG00000004628	polr1d	92	71.429	Poecilia_mexicana
ENSMICG00000016883	-	79	71.429	ENSPREG00000022032	polr1d	92	71.429	Poecilia_reticulata
ENSMICG00000016883	-	100	96.992	ENSPCOG00000028175	POLR1D	100	96.992	Propithecus_coquereli
ENSMICG00000016883	-	80	70.093	ENSPNYG00000000107	polr1d	94	70.093	Pundamilia_nyererei
ENSMICG00000016883	-	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSMICG00000016883	-	100	92.481	ENSRBIG00000000336	-	100	92.481	Rhinopithecus_bieti
ENSMICG00000016883	-	100	96.241	ENSRBIG00000036378	-	100	96.241	Rhinopithecus_bieti
ENSMICG00000016883	-	100	96.241	ENSRROG00000042232	-	100	96.241	Rhinopithecus_roxellana
ENSMICG00000016883	-	100	92.481	ENSRROG00000026751	-	100	92.481	Rhinopithecus_roxellana
ENSMICG00000016883	-	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSMICG00000016883	-	100	96.992	ENSSBOG00000028482	-	100	96.992	Saimiri_boliviensis_boliviensis
ENSMICG00000016883	-	86	92.105	ENSSBOG00000030146	-	84	92.105	Saimiri_boliviensis_boliviensis
ENSMICG00000016883	-	80	82.075	ENSSHAG00000001190	POLR1D	82	82.075	Sarcophilus_harrisii
ENSMICG00000016883	-	82	72.477	ENSSFOG00015011375	polr1d	96	72.477	Scleropages_formosus
ENSMICG00000016883	-	80	67.290	ENSSMAG00000011861	polr1d	94	67.290	Scophthalmus_maximus
ENSMICG00000016883	-	80	66.355	ENSSDUG00000011930	polr1d	94	66.355	Seriola_dumerili
ENSMICG00000016883	-	86	63.158	ENSSLDG00000023871	polr1d	97	63.158	Seriola_lalandi_dorsalis
ENSMICG00000016883	-	100	95.489	ENSSARG00000007840	POLR1D	100	95.489	Sorex_araneus
ENSMICG00000016883	-	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSMICG00000016883	-	79	71.429	ENSSPAG00000011764	polr1d	92	71.429	Stegastes_partitus
ENSMICG00000016883	-	100	95.489	ENSSSCG00000009310	POLR1D	100	95.489	Sus_scrofa
ENSMICG00000016883	-	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSMICG00000016883	-	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSMICG00000016883	-	93	95.968	ENSTBEG00000007006	POLR1D	100	95.968	Tupaia_belangeri
ENSMICG00000016883	-	100	96.992	ENSUAMG00000011413	POLR1D	100	96.992	Ursus_americanus
ENSMICG00000016883	-	93	96.774	ENSUMAG00000016968	POLR1D	97	96.774	Ursus_maritimus
ENSMICG00000016883	-	100	96.992	ENSVVUG00000009216	POLR1D	100	96.992	Vulpes_vulpes
ENSMICG00000016883	-	74	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSMICG00000016883	-	74	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus