EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000017428 (Gene tree)
Gene ID: 105868319
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 13978 bases
Position: chr17:29265399-29279376
Accession: 105868319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000015875	PPR	PF01535.20	4.6e-15	1	2
ENSMICP00000015875	PPR	PF01535.20	4.6e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000017427	-	2333	XM_012759023	ENSMICP00000015875	701 (aa)	XP_012614477	UPI000642F40F

Gene Model

Click here to download ENSMICG00000017428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000017428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000017428	-	100	77.606	ENSG00000248919	ATP5MF-PTCD1	93	77.151	Homo_sapiens
ENSMICG00000017428	-	100	77.606	ENSG00000106246	PTCD1	100	77.151	Homo_sapiens
ENSMICG00000017428	-	79	46.071	ENSAPOG00000010679	ptcd1	85	45.259	Acanthochromis_polyacanthus
ENSMICG00000017428	-	100	79.745	ENSAMEG00000006224	-	93	79.037	Ailuropoda_melanoleuca
ENSMICG00000017428	-	89	46.522	ENSACIG00000017861	ptcd1	92	46.390	Amphilophus_citrinellus
ENSMICG00000017428	-	88	46.104	ENSAOCG00000020741	-	85	46.104	Amphiprion_ocellaris
ENSMICG00000017428	-	84	45.408	ENSAOCG00000022617	ptcd1	86	45.408	Amphiprion_ocellaris
ENSMICG00000017428	-	95	44.060	ENSAPEG00000022632	ptcd1	92	44.060	Amphiprion_percula
ENSMICG00000017428	-	85	48.590	ENSATEG00000007016	ptcd1	82	48.161	Anabas_testudineus
ENSMICG00000017428	-	87	57.325	ENSAPLG00000006862	-	97	56.869	Anas_platyrhynchos
ENSMICG00000017428	-	98	55.070	ENSACAG00000012871	-	92	54.789	Anolis_carolinensis
ENSMICG00000017428	-	98	79.275	ENSANAG00000035790	-	100	79.275	Aotus_nancymaae
ENSMICG00000017428	-	87	46.677	ENSACLG00000002824	ptcd1	83	46.341	Astatotilapia_calliptera
ENSMICG00000017428	-	88	47.068	ENSAMXG00000037292	ptcd1	90	47.149	Astyanax_mexicanus
ENSMICG00000017428	-	100	79.149	ENSBTAG00000020440	-	87	79.149	Bos_taurus
ENSMICG00000017428	-	100	78.420	ENSCJAG00000015815	-	100	78.420	Callithrix_jacchus
ENSMICG00000017428	-	100	79.320	ENSCAFG00000015055	-	93	78.612	Canis_familiaris
ENSMICG00000017428	-	100	79.320	ENSCAFG00020014480	-	93	78.612	Canis_lupus_dingo
ENSMICG00000017428	-	100	78.156	ENSCHIG00000027000	-	99	78.156	Capra_hircus
ENSMICG00000017428	-	100	81.702	ENSTSYG00000029495	-	100	81.844	Carlito_syrichta
ENSMICG00000017428	-	93	76.596	ENSCAPG00000014660	-	100	76.596	Cavia_aperea
ENSMICG00000017428	-	100	76.271	ENSCPOG00000001780	-	100	76.271	Cavia_porcellus
ENSMICG00000017428	-	100	77.606	ENSCCAG00000034025	-	100	77.606	Cebus_capucinus
ENSMICG00000017428	-	99	77.574	ENSCATG00000040859	-	99	77.997	Cercocebus_atys
ENSMICG00000017428	-	98	78.066	ENSCLAG00000006354	-	100	77.054	Chinchilla_lanigera
ENSMICG00000017428	-	91	77.573	ENSCSAG00000017794	-	95	77.692	Chlorocebus_sabaeus
ENSMICG00000017428	-	99	54.090	ENSCPBG00000020866	-	99	53.633	Chrysemys_picta_bellii
ENSMICG00000017428	-	83	30.201	ENSCING00000007717	-	91	30.165	Ciona_intestinalis
ENSMICG00000017428	-	99	77.793	ENSCANG00000023441	-	99	77.904	Colobus_angolensis_palliatus
ENSMICG00000017428	-	99	75.429	ENSCGRG00001023686	Ptcd1	99	74.821	Cricetulus_griseus_chok1gshd
ENSMICG00000017428	-	99	74.893	ENSCGRG00000015031	Ptcd1	99	74.286	Cricetulus_griseus_crigri
ENSMICG00000017428	-	87	44.463	ENSCSEG00000002378	ptcd1	80	45.486	Cynoglossus_semilaevis
ENSMICG00000017428	-	85	46.103	ENSCVAG00000003621	ptcd1	87	45.861	Cyprinodon_variegatus
ENSMICG00000017428	-	84	46.578	ENSCVAG00000015826	ptcd1	82	46.333	Cyprinodon_variegatus
ENSMICG00000017428	-	86	49.355	ENSDARG00000076176	ptcd1	87	48.777	Danio_rerio
ENSMICG00000017428	-	99	77.240	ENSDNOG00000009957	-	99	77.525	Dasypus_novemcinctus
ENSMICG00000017428	-	98	75.325	ENSDORG00000000740	Ptcd1	99	75.325	Dipodomys_ordii
ENSMICG00000017428	-	92	40.656	ENSEBUG00000014515	ptcd1	97	40.314	Eptatretus_burgeri
ENSMICG00000017428	-	100	81.268	ENSEASG00005002480	-	100	81.268	Equus_asinus_asinus
ENSMICG00000017428	-	100	81.690	ENSECAG00000016617	-	100	81.690	Equus_caballus
ENSMICG00000017428	-	96	42.857	ENSELUG00000016517	ptcd1	94	42.441	Esox_lucius
ENSMICG00000017428	-	100	79.155	ENSFCAG00000015069	-	100	79.155	Felis_catus
ENSMICG00000017428	-	86	59.936	ENSFALG00000013803	-	86	59.840	Ficedula_albicollis
ENSMICG00000017428	-	100	75.779	ENSFDAG00000006393	-	100	75.603	Fukomys_damarensis
ENSMICG00000017428	-	75	46.011	ENSFHEG00000012491	ptcd1	89	45.656	Fundulus_heteroclitus
ENSMICG00000017428	-	86	45.977	ENSGMOG00000007639	ptcd1	94	45.813	Gadus_morhua
ENSMICG00000017428	-	86	57.256	ENSGALG00000004711	-	87	57.278	Gallus_gallus
ENSMICG00000017428	-	85	47.682	ENSGAFG00000013175	ptcd1	82	47.643	Gambusia_affinis
ENSMICG00000017428	-	85	47.438	ENSGACG00000016607	ptcd1	91	46.242	Gasterosteus_aculeatus
ENSMICG00000017428	-	86	58.333	ENSGAGG00000021832	-	84	58.979	Gopherus_agassizii
ENSMICG00000017428	-	99	77.920	ENSGGOG00000015123	-	99	77.461	Gorilla_gorilla
ENSMICG00000017428	-	87	46.515	ENSHBUG00000018275	ptcd1	83	46.179	Haplochromis_burtoni
ENSMICG00000017428	-	100	75.955	ENSHGLG00000017621	-	100	75.637	Heterocephalus_glaber_female
ENSMICG00000017428	-	100	75.955	ENSHGLG00100007218	-	100	75.637	Heterocephalus_glaber_male
ENSMICG00000017428	-	83	47.089	ENSHCOG00000010784	ptcd1	82	46.404	Hippocampus_comes
ENSMICG00000017428	-	100	76.479	ENSSTOG00000001682	-	100	76.479	Ictidomys_tridecemlineatus
ENSMICG00000017428	-	100	75.354	ENSJJAG00000000319	Ptcd1	100	74.894	Jaculus_jaculus
ENSMICG00000017428	-	88	45.527	ENSKMAG00000008708	ptcd1	81	46.050	Kryptolebias_marmoratus
ENSMICG00000017428	-	83	47.341	ENSLBEG00000008061	ptcd1	80	47.603	Labrus_bergylta
ENSMICG00000017428	-	88	56.625	ENSLACG00000011172	ptcd1	83	57.877	Latimeria_chalumnae
ENSMICG00000017428	-	92	52.212	ENSLOCG00000004833	ptcd1	99	51.487	Lepisosteus_oculatus
ENSMICG00000017428	-	99	73.191	ENSLAFG00000002588	-	99	73.796	Loxodonta_africana
ENSMICG00000017428	-	99	77.292	ENSMFAG00000041324	-	99	77.715	Macaca_fascicularis
ENSMICG00000017428	-	99	77.151	ENSMMUG00000030408	-	99	77.574	Macaca_mulatta
ENSMICG00000017428	-	99	77.292	ENSMNEG00000043786	-	99	77.715	Macaca_nemestrina
ENSMICG00000017428	-	99	58.956	ENSMLEG00000031179	-	99	60.224	Mandrillus_leucophaeus
ENSMICG00000017428	-	84	49.076	ENSMAMG00000007623	ptcd1	80	48.495	Mastacembelus_armatus
ENSMICG00000017428	-	87	46.677	ENSMZEG00005012722	ptcd1	83	46.341	Maylandia_zebra
ENSMICG00000017428	-	93	55.572	ENSMGAG00000004211	-	87	55.589	Meleagris_gallopavo
ENSMICG00000017428	-	87	45.820	ENSMMOG00000020243	ptcd1	92	45.177	Mola_mola
ENSMICG00000017428	-	98	58.799	ENSMODG00000001350	-	84	63.898	Monodelphis_domestica
ENSMICG00000017428	-	95	45.161	ENSMALG00000018442	ptcd1	88	44.874	Monopterus_albus
ENSMICG00000017428	-	99	75.323	MGP_CAROLIEiJ_G0028011	Ptcd1	99	75.287	Mus_caroli
ENSMICG00000017428	-	99	75.466	ENSMUSG00000029624	Ptcd1	99	75.610	Mus_musculus
ENSMICG00000017428	-	99	75.897	MGP_PahariEiJ_G0024580	Ptcd1	99	75.862	Mus_pahari
ENSMICG00000017428	-	99	75.323	MGP_SPRETEiJ_G0029012	Ptcd1	99	75.287	Mus_spretus
ENSMICG00000017428	-	100	76.738	ENSMPUG00000016518	-	100	76.738	Mustela_putorius_furo
ENSMICG00000017428	-	100	80.986	ENSMLUG00000010994	-	94	81.268	Myotis_lucifugus
ENSMICG00000017428	-	92	45.053	ENSNBRG00000010079	ptcd1	84	47.508	Neolamprologus_brichardi
ENSMICG00000017428	-	99	81.421	ENSNLEG00000011060	-	99	81.421	Nomascus_leucogenys
ENSMICG00000017428	-	97	61.000	ENSMEUG00000006930	-	99	60.286	Notamacropus_eugenii
ENSMICG00000017428	-	89	77.230	ENSOPRG00000013647	-	89	76.526	Ochotona_princeps
ENSMICG00000017428	-	87	45.543	ENSONIG00000003168	ptcd1	99	45.203	Oreochromis_niloticus
ENSMICG00000017428	-	81	55.214	ENSOANG00000007728	-	73	55.323	Ornithorhynchus_anatinus
ENSMICG00000017428	-	99	75.393	ENSOCUG00000010584	-	97	75.393	Oryctolagus_cuniculus
ENSMICG00000017428	-	85	45.470	ENSORLG00000009275	ptcd1	85	45.605	Oryzias_latipes
ENSMICG00000017428	-	85	45.634	ENSORLG00020000988	ptcd1	85	45.695	Oryzias_latipes_hni
ENSMICG00000017428	-	85	45.050	ENSORLG00015010557	ptcd1	85	45.183	Oryzias_latipes_hsok
ENSMICG00000017428	-	87	46.141	ENSOMEG00000020627	ptcd1	88	45.806	Oryzias_melastigma
ENSMICG00000017428	-	99	83.381	ENSOGAG00000010877	-	100	83.381	Otolemur_garnettii
ENSMICG00000017428	-	100	73.654	ENSOARG00000018676	-	100	73.654	Ovis_aries
ENSMICG00000017428	-	100	77.042	ENSPPAG00000036024	-	100	76.587	Pan_paniscus
ENSMICG00000017428	-	100	79.574	ENSPPRG00000003478	-	100	79.574	Panthera_pardus
ENSMICG00000017428	-	100	77.324	ENSPTRG00000019452	-	100	76.869	Pan_troglodytes
ENSMICG00000017428	-	99	77.574	ENSPANG00000016730	-	99	77.997	Papio_anubis
ENSMICG00000017428	-	95	48.889	ENSPKIG00000014215	ptcd1	95	48.889	Paramormyrops_kingsleyae
ENSMICG00000017428	-	85	58.167	ENSPSIG00000011184	-	100	57.285	Pelodiscus_sinensis
ENSMICG00000017428	-	73	41.412	ENSPMAG00000009667	ptcd1	100	40.727	Petromyzon_marinus
ENSMICG00000017428	-	87	64.331	ENSPCIG00000024778	-	89	61.377	Phascolarctos_cinereus
ENSMICG00000017428	-	84	47.088	ENSPFOG00000004458	ptcd1	82	46.901	Poecilia_formosa
ENSMICG00000017428	-	85	46.854	ENSPLAG00000011051	ptcd1	82	47.049	Poecilia_latipinna
ENSMICG00000017428	-	84	46.922	ENSPMEG00000020547	ptcd1	82	46.566	Poecilia_mexicana
ENSMICG00000017428	-	84	46.512	ENSPREG00000000059	ptcd1	87	44.444	Poecilia_reticulata
ENSMICG00000017428	-	95	78.892	ENSPPYG00000017377	-	99	78.411	Pongo_abelii
ENSMICG00000017428	-	80	81.481	ENSPCAG00000001852	-	88	81.481	Procavia_capensis
ENSMICG00000017428	-	100	91.155	ENSPCOG00000018596	-	100	91.155	Propithecus_coquereli
ENSMICG00000017428	-	67	83.000	ENSPVAG00000007529	-	71	83.000	Pteropus_vampyrus
ENSMICG00000017428	-	87	46.191	ENSPNYG00000019993	ptcd1	83	46.016	Pundamilia_nyererei
ENSMICG00000017428	-	89	49.612	ENSPNAG00000014931	ptcd1	92	48.851	Pygocentrus_nattereri
ENSMICG00000017428	-	99	75.827	ENSRNOG00000000987	Ptcd1	99	75.252	Rattus_norvegicus
ENSMICG00000017428	-	99	78.076	ENSRBIG00000043393	-	99	78.187	Rhinopithecus_bieti
ENSMICG00000017428	-	99	77.793	ENSRROG00000036420	-	99	77.904	Rhinopithecus_roxellana
ENSMICG00000017428	-	100	79.320	ENSSBOG00000024114	-	100	78.298	Saimiri_boliviensis_boliviensis
ENSMICG00000017428	-	91	62.442	ENSSHAG00000011376	-	98	61.824	Sarcophilus_harrisii
ENSMICG00000017428	-	87	51.817	ENSSFOG00015007909	ptcd1	81	53.115	Scleropages_formosus
ENSMICG00000017428	-	86	44.878	ENSSMAG00000000218	ptcd1	93	44.901	Scophthalmus_maximus
ENSMICG00000017428	-	99	44.176	ENSSDUG00000015671	ptcd1	96	43.670	Seriola_dumerili
ENSMICG00000017428	-	96	43.548	ENSSLDG00000014261	ptcd1	93	42.669	Seriola_lalandi_dorsalis
ENSMICG00000017428	-	88	57.387	ENSSPUG00000003540	-	86	57.614	Sphenodon_punctatus
ENSMICG00000017428	-	90	45.242	ENSSPAG00000011049	ptcd1	87	45.242	Stegastes_partitus
ENSMICG00000017428	-	91	81.366	ENSSSCG00000007622	-	98	81.193	Sus_scrofa
ENSMICG00000017428	-	87	60.033	ENSTGUG00000007563	-	99	59.967	Taeniopygia_guttata
ENSMICG00000017428	-	85	46.980	ENSTRUG00000013471	ptcd1	81	46.980	Takifugu_rubripes
ENSMICG00000017428	-	89	45.912	ENSTNIG00000008271	ptcd1	88	45.283	Tetraodon_nigroviridis
ENSMICG00000017428	-	99	79.173	ENSTBEG00000011021	-	99	79.030	Tupaia_belangeri
ENSMICG00000017428	-	100	77.872	ENSTTRG00000003006	-	100	77.872	Tursiops_truncatus
ENSMICG00000017428	-	100	79.745	ENSUAMG00000008049	-	100	79.037	Ursus_americanus
ENSMICG00000017428	-	99	79.232	ENSVVUG00000008836	-	100	79.232	Vulpes_vulpes
ENSMICG00000017428	-	89	52.126	ENSXETG00000009891	ptcd1	92	50.855	Xenopus_tropicalis
ENSMICG00000017428	-	85	46.500	ENSXMAG00000015540	ptcd1	82	46.441	Xiphophorus_maculatus