EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000017539 (Gene tree)
Gene ID: 105870219
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 33119 bases
Position: chr15:516373-549491
Accession: 105870219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000038907	GUCT	PF08152.12	1.5e-28	1	1
ENSMICP00000015973	GUCT	PF08152.12	9.6e-28	1	1
ENSMICP00000038907	ResIII	PF04851.15	1.9e-09	1	1
ENSMICP00000015973	ResIII	PF04851.15	3e-09	1	1
ENSMICP00000038907	DEAD	PF00270.29	8.3e-37	1	1
ENSMICP00000015973	DEAD	PF00270.29	9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000046839	DDX50-202	2019	-	ENSMICP00000038907	673 (aa)	-	UPI000C2ED6E4
ENSMICT00000017539	DDX50-201	2052	XM_012762666	ENSMICP00000015973	683 (aa)	XP_012618120	UPI000C2EA8AA

Gene Model

Click here to download ENSMICG00000017539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000017539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000017539	DDX50	55	31.034	ENSMICG00000047072	-	53	32.329
ENSMICG00000017539	DDX50	91	58.110	ENSMICG00000033371	-	88	68.489
ENSMICG00000017539	DDX50	50	32.708	ENSMICG00000035071	DDX10	52	32.708
ENSMICG00000017539	DDX50	50	30.623	ENSMICG00000045127	-	88	30.623
ENSMICG00000017539	DDX50	56	31.116	ENSMICG00000002005	DDX27	52	31.116
ENSMICG00000017539	DDX50	50	30.055	ENSMICG00000044243	-	88	30.055
ENSMICG00000017539	DDX50	50	30.055	ENSMICG00000041585	-	86	30.055
ENSMICG00000017539	DDX50	91	60.000	ENSMICG00000015112	-	70	66.120
ENSMICG00000017539	DDX50	50	30.894	ENSMICG00000034467	-	88	30.894
ENSMICG00000017539	DDX50	58	30.524	ENSMICG00000017145	DDX43	65	33.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000017539	DDX50	100	90.773	ENSG00000107625	DDX50	100	90.773	Homo_sapiens
ENSMICG00000017539	DDX50	100	89.566	ENSAMEG00000017992	DDX50	100	89.566	Ailuropoda_melanoleuca
ENSMICG00000017539	DDX50	52	69.748	ENSANAG00000030991	-	87	76.846	Aotus_nancymaae
ENSMICG00000017539	DDX50	91	70.188	ENSANAG00000017785	-	91	70.188	Aotus_nancymaae
ENSMICG00000017539	DDX50	100	89.688	ENSBTAG00000033413	DDX50	100	89.688	Bos_taurus
ENSMICG00000017539	DDX50	100	90.909	ENSCJAG00000018844	DDX50	99	97.878	Callithrix_jacchus
ENSMICG00000017539	DDX50	100	89.973	ENSCAFG00000013776	DDX50	100	89.973	Canis_familiaris
ENSMICG00000017539	DDX50	100	89.973	ENSCAFG00020025977	DDX50	99	89.973	Canis_lupus_dingo
ENSMICG00000017539	DDX50	100	89.281	ENSCHIG00000000285	DDX50	99	89.281	Capra_hircus
ENSMICG00000017539	DDX50	100	90.529	ENSTSYG00000004192	DDX50	99	97.861	Carlito_syrichta
ENSMICG00000017539	DDX50	91	68.101	ENSCAPG00000007230	-	87	69.954	Cavia_aperea
ENSMICG00000017539	DDX50	100	88.723	ENSCPOG00000002131	-	100	88.723	Cavia_porcellus
ENSMICG00000017539	DDX50	91	87.500	ENSCCAG00000030543	DDX50	100	87.500	Cebus_capucinus
ENSMICG00000017539	DDX50	99	90.429	ENSCATG00000032463	DDX50	97	90.429	Cercocebus_atys
ENSMICG00000017539	DDX50	97	68.466	ENSCATG00000035153	-	89	88.715	Cercocebus_atys
ENSMICG00000017539	DDX50	99	63.611	ENSCATG00000039259	-	89	65.490	Cercocebus_atys
ENSMICG00000017539	DDX50	100	89.688	ENSCLAG00000012957	-	100	89.688	Chinchilla_lanigera
ENSMICG00000017539	DDX50	54	86.188	ENSCLAG00000001553	-	79	87.097	Chinchilla_lanigera
ENSMICG00000017539	DDX50	96	62.781	ENSCLAG00000001938	-	91	63.093	Chinchilla_lanigera
ENSMICG00000017539	DDX50	100	90.909	ENSCSAG00000007703	DDX50	100	90.909	Chlorocebus_sabaeus
ENSMICG00000017539	DDX50	84	91.400	ENSCHOG00000000233	DDX50	97	87.461	Choloepus_hoffmanni
ENSMICG00000017539	DDX50	100	83.122	ENSCANG00000036450	-	100	83.122	Colobus_angolensis_palliatus
ENSMICG00000017539	DDX50	88	69.836	ENSCANG00000018820	-	88	70.483	Colobus_angolensis_palliatus
ENSMICG00000017539	DDX50	96	64.950	ENSCANG00000028077	-	91	64.318	Colobus_angolensis_palliatus
ENSMICG00000017539	DDX50	100	87.924	ENSCGRG00001020223	Ddx50	100	87.924	Cricetulus_griseus_chok1gshd
ENSMICG00000017539	DDX50	91	87.407	ENSCGRG00000015884	Ddx50	92	87.463	Cricetulus_griseus_crigri
ENSMICG00000017539	DDX50	87	82.870	ENSDNOG00000001675	DDX50	100	82.407	Dasypus_novemcinctus
ENSMICG00000017539	DDX50	100	88.874	ENSDORG00000007310	Ddx50	100	88.874	Dipodomys_ordii
ENSMICG00000017539	DDX50	89	96.163	ENSETEG00000014069	DDX50	85	96.163	Echinops_telfairi
ENSMICG00000017539	DDX50	100	89.417	ENSEASG00005015595	DDX50	99	89.417	Equus_asinus_asinus
ENSMICG00000017539	DDX50	100	89.552	ENSECAG00000023044	DDX50	99	89.552	Equus_caballus
ENSMICG00000017539	DDX50	88	93.103	ENSEEUG00000005782	DDX50	79	93.103	Erinaceus_europaeus
ENSMICG00000017539	DDX50	100	90.379	ENSFCAG00000012678	DDX50	99	90.379	Felis_catus
ENSMICG00000017539	DDX50	91	82.153	ENSFDAG00000016109	-	91	82.153	Fukomys_damarensis
ENSMICG00000017539	DDX50	55	81.671	ENSGGOG00000041063	-	81	84.177	Gorilla_gorilla
ENSMICG00000017539	DDX50	52	74.425	ENSGGOG00000022568	-	90	77.778	Gorilla_gorilla
ENSMICG00000017539	DDX50	100	90.773	ENSGGOG00000010100	DDX50	99	98.396	Gorilla_gorilla
ENSMICG00000017539	DDX50	100	88.060	ENSHGLG00000013466	DDX50	100	88.060	Heterocephalus_glaber_female
ENSMICG00000017539	DDX50	100	88.060	ENSHGLG00100017191	DDX50	100	88.060	Heterocephalus_glaber_male
ENSMICG00000017539	DDX50	81	85.638	ENSHGLG00100006568	-	92	85.638	Heterocephalus_glaber_male
ENSMICG00000017539	DDX50	100	87.534	ENSSTOG00000021852	-	100	87.534	Ictidomys_tridecemlineatus
ENSMICG00000017539	DDX50	100	87.636	ENSJJAG00000023928	-	100	87.636	Jaculus_jaculus
ENSMICG00000017539	DDX50	100	68.269	ENSJJAG00000019626	-	91	68.453	Jaculus_jaculus
ENSMICG00000017539	DDX50	100	89.417	ENSLAFG00000006186	DDX50	100	89.417	Loxodonta_africana
ENSMICG00000017539	DDX50	100	90.909	ENSMFAG00000044067	DDX50	100	90.909	Macaca_fascicularis
ENSMICG00000017539	DDX50	97	67.482	ENSMFAG00000045339	-	89	88.088	Macaca_fascicularis
ENSMICG00000017539	DDX50	100	91.619	ENSMMUG00000001006	DDX50	100	90.909	Macaca_mulatta
ENSMICG00000017539	DDX50	92	65.039	ENSMMUG00000045343	-	88	64.937	Macaca_mulatta
ENSMICG00000017539	DDX50	97	67.552	ENSMNEG00000045530	-	89	89.028	Macaca_nemestrina
ENSMICG00000017539	DDX50	100	84.668	ENSMNEG00000031664	DDX50	92	83.481	Macaca_nemestrina
ENSMICG00000017539	DDX50	53	74.022	ENSMNEG00000034754	-	89	72.840	Macaca_nemestrina
ENSMICG00000017539	DDX50	100	89.145	ENSMLEG00000037313	DDX50	100	89.145	Mandrillus_leucophaeus
ENSMICG00000017539	DDX50	97	69.604	ENSMLEG00000041988	-	88	87.147	Mandrillus_leucophaeus
ENSMICG00000017539	DDX50	53	81.840	ENSMAUG00000022192	Ddx50	100	81.840	Mesocricetus_auratus
ENSMICG00000017539	DDX50	100	87.551	ENSMOCG00000001676	Ddx50	100	87.551	Microtus_ochrogaster
ENSMICG00000017539	DDX50	91	73.568	ENSMODG00000010741	DDX50	92	73.830	Monodelphis_domestica
ENSMICG00000017539	DDX50	100	88.315	MGP_CAROLIEiJ_G0015389	Ddx50	100	88.315	Mus_caroli
ENSMICG00000017539	DDX50	100	88.451	ENSMUSG00000020076	Ddx50	100	88.451	Mus_musculus
ENSMICG00000017539	DDX50	100	88.587	MGP_PahariEiJ_G0030805	Ddx50	100	88.587	Mus_pahari
ENSMICG00000017539	DDX50	100	88.451	MGP_SPRETEiJ_G0016200	Ddx50	100	88.451	Mus_spretus
ENSMICG00000017539	DDX50	87	89.043	ENSMPUG00000004589	DDX50	99	89.043	Mustela_putorius_furo
ENSMICG00000017539	DDX50	91	88.201	ENSMLUG00000017590	DDX50	92	88.201	Myotis_lucifugus
ENSMICG00000017539	DDX50	100	88.602	ENSNGAG00000004283	Ddx50	100	88.602	Nannospalax_galili
ENSMICG00000017539	DDX50	100	90.773	ENSNLEG00000011631	DDX50	100	90.773	Nomascus_leucogenys
ENSMICG00000017539	DDX50	98	65.936	ENSNLEG00000035506	-	88	76.875	Nomascus_leucogenys
ENSMICG00000017539	DDX50	91	85.988	ENSOPRG00000001619	DDX50	92	86.283	Ochotona_princeps
ENSMICG00000017539	DDX50	100	88.874	ENSODEG00000014597	-	100	88.874	Octodon_degus
ENSMICG00000017539	DDX50	91	66.104	ENSOANG00000004776	DDX50	82	64.363	Ornithorhynchus_anatinus
ENSMICG00000017539	DDX50	100	84.803	ENSOCUG00000002879	DDX50	95	87.316	Oryctolagus_cuniculus
ENSMICG00000017539	DDX50	100	90.909	ENSOGAG00000001844	DDX50	100	90.909	Otolemur_garnettii
ENSMICG00000017539	DDX50	100	89.145	ENSOARG00000005264	DDX50	99	89.145	Ovis_aries
ENSMICG00000017539	DDX50	51	74.419	ENSPPAG00000026788	-	89	77.812	Pan_paniscus
ENSMICG00000017539	DDX50	53	82.222	ENSPPAG00000033902	-	86	83.228	Pan_paniscus
ENSMICG00000017539	DDX50	100	90.638	ENSPPAG00000040723	DDX50	100	90.638	Pan_paniscus
ENSMICG00000017539	DDX50	100	90.379	ENSPPRG00000015826	DDX50	100	90.379	Panthera_pardus
ENSMICG00000017539	DDX50	100	90.379	ENSPTIG00000008454	DDX50	100	90.379	Panthera_tigris_altaica
ENSMICG00000017539	DDX50	100	90.638	ENSPTRG00000002562	DDX50	100	90.638	Pan_troglodytes
ENSMICG00000017539	DDX50	51	74.709	ENSPTRG00000044913	-	99	69.921	Pan_troglodytes
ENSMICG00000017539	DDX50	100	83.718	ENSPANG00000022143	-	100	83.718	Papio_anubis
ENSMICG00000017539	DDX50	53	74.581	ENSPANG00000032548	-	89	73.457	Papio_anubis
ENSMICG00000017539	DDX50	91	86.283	ENSPEMG00000020899	-	92	86.431	Peromyscus_maniculatus_bairdii
ENSMICG00000017539	DDX50	98	70.289	ENSPCIG00000016036	DDX50	94	74.307	Phascolarctos_cinereus
ENSMICG00000017539	DDX50	92	93.827	ENSPPYG00000002390	DDX50	97	93.740	Pongo_abelii
ENSMICG00000017539	DDX50	82	74.188	ENSPCAG00000009692	DDX50	100	74.188	Procavia_capensis
ENSMICG00000017539	DDX50	78	89.362	ENSPCOG00000012574	DDX50	99	80.077	Propithecus_coquereli
ENSMICG00000017539	DDX50	85	81.267	ENSPVAG00000009519	DDX50	74	86.477	Pteropus_vampyrus
ENSMICG00000017539	DDX50	100	88.043	ENSRNOG00000000396	Ddx50	98	97.059	Rattus_norvegicus
ENSMICG00000017539	DDX50	99	64.580	ENSRBIG00000039673	-	90	63.721	Rhinopithecus_bieti
ENSMICG00000017539	DDX50	87	88.026	ENSRBIG00000042841	-	95	93.262	Rhinopithecus_bieti
ENSMICG00000017539	DDX50	99	65.473	ENSRBIG00000036573	-	92	65.258	Rhinopithecus_bieti
ENSMICG00000017539	DDX50	56	71.353	ENSRROG00000031940	-	87	74.462	Rhinopithecus_roxellana
ENSMICG00000017539	DDX50	99	63.324	ENSRROG00000022853	-	91	63.067	Rhinopithecus_roxellana
ENSMICG00000017539	DDX50	100	90.638	ENSRROG00000032158	DDX50	97	93.740	Rhinopithecus_roxellana
ENSMICG00000017539	DDX50	100	80.190	ENSSBOG00000014441	DDX50	100	80.190	Saimiri_boliviensis_boliviensis
ENSMICG00000017539	DDX50	84	63.443	ENSSHAG00000005334	-	80	63.443	Sarcophilus_harrisii
ENSMICG00000017539	DDX50	84	79.530	ENSSHAG00000005690	DDX50	91	74.471	Sarcophilus_harrisii
ENSMICG00000017539	DDX50	87	79.814	ENSSARG00000013553	DDX50	88	79.814	Sorex_araneus
ENSMICG00000017539	DDX50	100	88.874	ENSSSCG00000010246	DDX50	99	88.874	Sus_scrofa
ENSMICG00000017539	DDX50	84	92.090	ENSTBEG00000001085	DDX50	84	83.012	Tupaia_belangeri
ENSMICG00000017539	DDX50	100	83.311	ENSTTRG00000012408	DDX50	99	83.311	Tursiops_truncatus
ENSMICG00000017539	DDX50	100	89.702	ENSUAMG00000010976	DDX50	99	92.662	Ursus_americanus
ENSMICG00000017539	DDX50	100	89.702	ENSUMAG00000007726	DDX50	99	89.702	Ursus_maritimus
ENSMICG00000017539	DDX50	100	89.145	ENSVPAG00000000626	DDX50	100	89.145	Vicugna_pacos
ENSMICG00000017539	DDX50	77	88.385	ENSVVUG00000020366	DDX50	98	97.594	Vulpes_vulpes