EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000017561 (Gene tree)
Gene ID: 105856294
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 6687 bases
Position: chr17:988841-995527
Accession: 105856294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049868	PseudoU_synth_2	PF00849.22	7.9e-24	1	1
ENSMICP00000039094	PseudoU_synth_2	PF00849.22	4.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000045587	RPUSD1-202	403	XM_020281390	ENSMICP00000039094	131 (aa)	XP_020136979	UPI00098AACE9
ENSMICT00000062788	RPUSD1-201	1932	XM_012737856	ENSMICP00000049868	307 (aa)	XP_012593310	UPI000642B0C6

Gene Model

Click here to download ENSMICG00000017561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000017561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000017561	RPUSD1	100	90.840	ENSG00000007376	RPUSD1	100	91.667	Homo_sapiens
ENSMICG00000017561	RPUSD1	98	55.776	ENSAPOG00000022221	rpusd1	98	55.776	Acanthochromis_polyacanthus
ENSMICG00000017561	RPUSD1	100	83.062	ENSAMEG00000007461	RPUSD1	100	82.410	Ailuropoda_melanoleuca
ENSMICG00000017561	RPUSD1	98	56.863	ENSACIG00000015863	rpusd1	98	57.190	Amphilophus_citrinellus
ENSMICG00000017561	RPUSD1	98	55.410	ENSAOCG00000021975	rpusd1	95	55.410	Amphiprion_ocellaris
ENSMICG00000017561	RPUSD1	98	55.738	ENSAPEG00000001316	rpusd1	95	55.738	Amphiprion_percula
ENSMICG00000017561	RPUSD1	78	73.529	ENSATEG00000002984	rpusd1	98	56.721	Anabas_testudineus
ENSMICG00000017561	RPUSD1	79	59.836	ENSAPLG00000012316	RPUSD1	100	59.836	Anas_platyrhynchos
ENSMICG00000017561	RPUSD1	98	67.550	ENSACAG00000008953	RPUSD1	100	66.776	Anolis_carolinensis
ENSMICG00000017561	RPUSD1	100	85.489	ENSANAG00000024709	RPUSD1	100	88.462	Aotus_nancymaae
ENSMICG00000017561	RPUSD1	78	75.490	ENSACLG00000013692	rpusd1	98	57.655	Astatotilapia_calliptera
ENSMICG00000017561	RPUSD1	99	57.237	ENSAMXG00000019802	rpusd1	100	56.908	Astyanax_mexicanus
ENSMICG00000017561	RPUSD1	100	83.861	ENSBTAG00000000179	RPUSD1	100	83.544	Bos_taurus
ENSMICG00000017561	RPUSD1	100	88.141	ENSCJAG00000012253	RPUSD1	100	88.141	Callithrix_jacchus
ENSMICG00000017561	RPUSD1	100	83.713	ENSCAFG00000019614	RPUSD1	100	82.736	Canis_familiaris
ENSMICG00000017561	RPUSD1	100	83.713	ENSCAFG00020008891	RPUSD1	100	82.736	Canis_lupus_dingo
ENSMICG00000017561	RPUSD1	100	82.595	ENSCHIG00000012872	RPUSD1	100	82.278	Capra_hircus
ENSMICG00000017561	RPUSD1	100	92.366	ENSTSYG00000036934	RPUSD1	100	92.366	Carlito_syrichta
ENSMICG00000017561	RPUSD1	100	85.577	ENSCAPG00000014219	RPUSD1	100	85.668	Cavia_aperea
ENSMICG00000017561	RPUSD1	100	85.577	ENSCPOG00000034604	RPUSD1	100	85.668	Cavia_porcellus
ENSMICG00000017561	RPUSD1	100	86.120	ENSCCAG00000034385	RPUSD1	100	89.423	Cebus_capucinus
ENSMICG00000017561	RPUSD1	100	93.130	ENSCATG00000042983	RPUSD1	100	93.130	Cercocebus_atys
ENSMICG00000017561	RPUSD1	100	84.887	ENSCLAG00000013966	RPUSD1	100	85.342	Chinchilla_lanigera
ENSMICG00000017561	RPUSD1	100	88.462	ENSCSAG00000012121	RPUSD1	100	88.462	Chlorocebus_sabaeus
ENSMICG00000017561	RPUSD1	100	67.586	ENSCPBG00000021101	RPUSD1	99	66.118	Chrysemys_picta_bellii
ENSMICG00000017561	RPUSD1	100	92.366	ENSCANG00000028576	RPUSD1	100	92.366	Colobus_angolensis_palliatus
ENSMICG00000017561	RPUSD1	100	86.408	ENSCGRG00001014253	Rpusd1	100	85.761	Cricetulus_griseus_chok1gshd
ENSMICG00000017561	RPUSD1	100	86.408	ENSCGRG00000017995	Rpusd1	100	85.761	Cricetulus_griseus_crigri
ENSMICG00000017561	RPUSD1	99	55.700	ENSCSEG00000018512	rpusd1	100	55.882	Cynoglossus_semilaevis
ENSMICG00000017561	RPUSD1	79	73.786	ENSCSEG00000007648	-	100	73.786	Cynoglossus_semilaevis
ENSMICG00000017561	RPUSD1	98	56.478	ENSCVAG00000022746	rpusd1	98	55.333	Cyprinodon_variegatus
ENSMICG00000017561	RPUSD1	100	62.500	ENSDARG00000060192	rpusd1	100	58.654	Danio_rerio
ENSMICG00000017561	RPUSD1	100	84.615	ENSDNOG00000003721	RPUSD1	100	84.615	Dasypus_novemcinctus
ENSMICG00000017561	RPUSD1	100	88.925	ENSDORG00000026656	Rpusd1	100	88.925	Dipodomys_ordii
ENSMICG00000017561	RPUSD1	99	45.312	ENSEBUG00000008767	rpusd1	94	45.312	Eptatretus_burgeri
ENSMICG00000017561	RPUSD1	100	84.810	ENSEASG00005018421	RPUSD1	76	86.392	Equus_asinus_asinus
ENSMICG00000017561	RPUSD1	79	71.845	ENSELUG00000014307	rpusd1	88	53.443	Esox_lucius
ENSMICG00000017561	RPUSD1	100	84.039	ENSFCAG00000010359	RPUSD1	100	83.388	Felis_catus
ENSMICG00000017561	RPUSD1	92	77.500	ENSFALG00000003211	RPUSD1	100	64.803	Ficedula_albicollis
ENSMICG00000017561	RPUSD1	100	85.897	ENSFDAG00000013398	RPUSD1	100	85.714	Fukomys_damarensis
ENSMICG00000017561	RPUSD1	98	54.455	ENSFHEG00000004736	rpusd1	98	54.785	Fundulus_heteroclitus
ENSMICG00000017561	RPUSD1	78	73.529	ENSGMOG00000010756	rpusd1	98	55.263	Gadus_morhua
ENSMICG00000017561	RPUSD1	92	75.000	ENSGALG00000005315	RPUSD1	100	64.918	Gallus_gallus
ENSMICG00000017561	RPUSD1	98	56.333	ENSGAFG00000009886	rpusd1	98	56.333	Gambusia_affinis
ENSMICG00000017561	RPUSD1	76	74.000	ENSGACG00000014276	rpusd1	97	56.106	Gasterosteus_aculeatus
ENSMICG00000017561	RPUSD1	99	65.789	ENSGAGG00000004181	RPUSD1	99	65.789	Gopherus_agassizii
ENSMICG00000017561	RPUSD1	100	90.840	ENSGGOG00000013997	RPUSD1	100	90.840	Gorilla_gorilla
ENSMICG00000017561	RPUSD1	78	74.510	ENSHBUG00000023728	rpusd1	98	57.329	Haplochromis_burtoni
ENSMICG00000017561	RPUSD1	100	85.668	ENSHGLG00000002595	RPUSD1	100	85.668	Heterocephalus_glaber_female
ENSMICG00000017561	RPUSD1	100	85.668	ENSHGLG00100014303	RPUSD1	100	85.668	Heterocephalus_glaber_male
ENSMICG00000017561	RPUSD1	79	77.670	ENSHCOG00000002390	rpusd1	99	57.756	Hippocampus_comes
ENSMICG00000017561	RPUSD1	79	77.670	ENSHCOG00000020005	-	97	77.670	Hippocampus_comes
ENSMICG00000017561	RPUSD1	99	59.736	ENSIPUG00000001570	rpusd1	99	59.736	Ictalurus_punctatus
ENSMICG00000017561	RPUSD1	100	88.141	ENSSTOG00000004276	RPUSD1	100	87.821	Ictidomys_tridecemlineatus
ENSMICG00000017561	RPUSD1	100	84.076	ENSJJAG00000015696	Rpusd1	100	86.218	Jaculus_jaculus
ENSMICG00000017561	RPUSD1	98	56.000	ENSKMAG00000017287	rpusd1	98	56.000	Kryptolebias_marmoratus
ENSMICG00000017561	RPUSD1	98	56.818	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSMICG00000017561	RPUSD1	98	56.818	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSMICG00000017561	RPUSD1	99	62.500	ENSLACG00000008869	RPUSD1	99	62.500	Latimeria_chalumnae
ENSMICG00000017561	RPUSD1	79	79.612	ENSLOCG00000005682	rpusd1	99	73.148	Lepisosteus_oculatus
ENSMICG00000017561	RPUSD1	100	81.433	ENSLAFG00000002115	RPUSD1	100	81.107	Loxodonta_africana
ENSMICG00000017561	RPUSD1	100	93.130	ENSMFAG00000003961	RPUSD1	100	93.130	Macaca_fascicularis
ENSMICG00000017561	RPUSD1	100	93.130	ENSMMUG00000000842	RPUSD1	100	93.130	Macaca_mulatta
ENSMICG00000017561	RPUSD1	100	93.130	ENSMNEG00000042712	RPUSD1	100	93.130	Macaca_nemestrina
ENSMICG00000017561	RPUSD1	100	93.130	ENSMLEG00000030591	RPUSD1	100	93.130	Mandrillus_leucophaeus
ENSMICG00000017561	RPUSD1	78	72.549	ENSMAMG00000004735	rpusd1	98	56.536	Mastacembelus_armatus
ENSMICG00000017561	RPUSD1	78	75.490	ENSMZEG00005003214	rpusd1	98	57.655	Maylandia_zebra
ENSMICG00000017561	RPUSD1	97	64.765	ENSMGAG00000005447	RPUSD1	99	64.094	Meleagris_gallopavo
ENSMICG00000017561	RPUSD1	92	83.333	ENSMAUG00000019998	Rpusd1	100	78.947	Mesocricetus_auratus
ENSMICG00000017561	RPUSD1	100	82.484	ENSMOCG00000014082	Rpusd1	100	84.295	Microtus_ochrogaster
ENSMICG00000017561	RPUSD1	82	72.222	ENSMMOG00000012569	rpusd1	99	56.146	Mola_mola
ENSMICG00000017561	RPUSD1	92	75.833	ENSMODG00000016882	RPUSD1	100	67.524	Monodelphis_domestica
ENSMICG00000017561	RPUSD1	98	55.882	ENSMALG00000017818	rpusd1	98	56.536	Monopterus_albus
ENSMICG00000017561	RPUSD1	100	83.758	MGP_CAROLIEiJ_G0021244	Rpusd1	100	85.016	Mus_caroli
ENSMICG00000017561	RPUSD1	100	84.076	ENSMUSG00000041199	Rpusd1	100	85.342	Mus_musculus
ENSMICG00000017561	RPUSD1	100	81.191	MGP_PahariEiJ_G0023562	Rpusd1	100	83.819	Mus_pahari
ENSMICG00000017561	RPUSD1	100	84.076	MGP_SPRETEiJ_G0022155	Rpusd1	100	85.342	Mus_spretus
ENSMICG00000017561	RPUSD1	100	82.085	ENSMPUG00000015897	RPUSD1	100	82.736	Mustela_putorius_furo
ENSMICG00000017561	RPUSD1	100	87.179	ENSMLUG00000001089	RPUSD1	100	87.179	Myotis_lucifugus
ENSMICG00000017561	RPUSD1	100	83.439	ENSNGAG00000003595	Rpusd1	100	84.691	Nannospalax_galili
ENSMICG00000017561	RPUSD1	78	75.490	ENSNBRG00000006457	rpusd1	98	56.908	Neolamprologus_brichardi
ENSMICG00000017561	RPUSD1	55	84.000	ENSNLEG00000008424	-	100	84.000	Nomascus_leucogenys
ENSMICG00000017561	RPUSD1	100	70.358	ENSMEUG00000016049	RPUSD1	100	68.730	Notamacropus_eugenii
ENSMICG00000017561	RPUSD1	99	79.672	ENSOPRG00000008340	RPUSD1	99	79.344	Ochotona_princeps
ENSMICG00000017561	RPUSD1	100	83.974	ENSODEG00000016945	RPUSD1	100	84.142	Octodon_degus
ENSMICG00000017561	RPUSD1	78	73.529	ENSONIG00000015672	rpusd1	99	56.678	Oreochromis_niloticus
ENSMICG00000017561	RPUSD1	79	74.757	ENSOANG00000030625	-	79	74.528	Ornithorhynchus_anatinus
ENSMICG00000017561	RPUSD1	99	58.416	ENSORLG00000013009	rpusd1	99	58.086	Oryzias_latipes
ENSMICG00000017561	RPUSD1	99	58.086	ENSORLG00020010382	rpusd1	99	57.756	Oryzias_latipes_hni
ENSMICG00000017561	RPUSD1	99	57.426	ENSORLG00015021354	rpusd1	99	57.096	Oryzias_latipes_hsok
ENSMICG00000017561	RPUSD1	94	66.129	ENSOMEG00000021426	rpusd1	98	57.667	Oryzias_melastigma
ENSMICG00000017561	RPUSD1	100	92.308	ENSOGAG00000003795	RPUSD1	100	93.590	Otolemur_garnettii
ENSMICG00000017561	RPUSD1	100	82.595	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSMICG00000017561	RPUSD1	100	90.076	ENSPPAG00000034797	RPUSD1	100	90.076	Pan_paniscus
ENSMICG00000017561	RPUSD1	100	84.365	ENSPPRG00000012389	RPUSD1	100	83.713	Panthera_pardus
ENSMICG00000017561	RPUSD1	100	84.039	ENSPTIG00000008545	RPUSD1	99	83.969	Panthera_tigris_altaica
ENSMICG00000017561	RPUSD1	100	90.076	ENSPTRG00000007565	RPUSD1	100	90.076	Pan_troglodytes
ENSMICG00000017561	RPUSD1	100	92.366	ENSPANG00000024401	RPUSD1	100	92.366	Papio_anubis
ENSMICG00000017561	RPUSD1	99	59.804	ENSPKIG00000018890	rpusd1	91	59.672	Paramormyrops_kingsleyae
ENSMICG00000017561	RPUSD1	92	78.333	ENSPSIG00000013945	RPUSD1	100	66.557	Pelodiscus_sinensis
ENSMICG00000017561	RPUSD1	98	57.667	ENSPMGG00000014950	rpusd1	98	57.667	Periophthalmus_magnuspinnatus
ENSMICG00000017561	RPUSD1	100	84.039	ENSPEMG00000000497	Rpusd1	100	83.974	Peromyscus_maniculatus_bairdii
ENSMICG00000017561	RPUSD1	98	50.329	ENSPMAG00000001563	rpusd1	99	50.329	Petromyzon_marinus
ENSMICG00000017561	RPUSD1	92	77.500	ENSPCIG00000021216	-	94	68.730	Phascolarctos_cinereus
ENSMICG00000017561	RPUSD1	98	57.667	ENSPFOG00000007946	rpusd1	98	57.667	Poecilia_formosa
ENSMICG00000017561	RPUSD1	98	57.667	ENSPLAG00000011925	rpusd1	98	57.667	Poecilia_latipinna
ENSMICG00000017561	RPUSD1	98	57.000	ENSPMEG00000002910	rpusd1	98	57.000	Poecilia_mexicana
ENSMICG00000017561	RPUSD1	98	56.667	ENSPREG00000019851	rpusd1	98	56.667	Poecilia_reticulata
ENSMICG00000017561	RPUSD1	100	68.404	ENSPCAG00000002258	RPUSD1	100	68.404	Procavia_capensis
ENSMICG00000017561	RPUSD1	100	95.192	ENSPCOG00000022582	RPUSD1	100	95.192	Propithecus_coquereli
ENSMICG00000017561	RPUSD1	100	85.256	ENSPVAG00000013104	RPUSD1	100	85.256	Pteropus_vampyrus
ENSMICG00000017561	RPUSD1	98	57.000	ENSPNYG00000024076	rpusd1	98	57.333	Pundamilia_nyererei
ENSMICG00000017561	RPUSD1	98	58.140	ENSPNAG00000013806	rpusd1	99	57.190	Pygocentrus_nattereri
ENSMICG00000017561	RPUSD1	100	83.758	ENSRNOG00000023639	Rpusd1	100	85.016	Rattus_norvegicus
ENSMICG00000017561	RPUSD1	100	93.130	ENSRBIG00000030238	RPUSD1	100	93.130	Rhinopithecus_bieti
ENSMICG00000017561	RPUSD1	100	93.130	ENSRROG00000036663	RPUSD1	100	93.130	Rhinopithecus_roxellana
ENSMICG00000017561	RPUSD1	100	86.971	ENSSBOG00000033063	RPUSD1	100	88.274	Saimiri_boliviensis_boliviensis
ENSMICG00000017561	RPUSD1	100	69.156	ENSSHAG00000013500	RPUSD1	100	68.404	Sarcophilus_harrisii
ENSMICG00000017561	RPUSD1	81	79.245	ENSSFOG00015014394	rpusd1	99	60.458	Scleropages_formosus
ENSMICG00000017561	RPUSD1	98	56.066	ENSSMAG00000008045	rpusd1	91	56.393	Scophthalmus_maximus
ENSMICG00000017561	RPUSD1	78	75.490	ENSSDUG00000001829	rpusd1	95	59.016	Seriola_dumerili
ENSMICG00000017561	RPUSD1	78	75.490	ENSSLDG00000020853	rpusd1	95	59.016	Seriola_lalandi_dorsalis
ENSMICG00000017561	RPUSD1	54	91.617	ENSSARG00000011187	-	100	91.617	Sorex_araneus
ENSMICG00000017561	RPUSD1	63	53.266	ENSSPUG00000005119	-	100	52.736	Sphenodon_punctatus
ENSMICG00000017561	RPUSD1	98	57.049	ENSSPAG00000012708	rpusd1	98	57.377	Stegastes_partitus
ENSMICG00000017561	RPUSD1	100	85.577	ENSSSCG00000008000	RPUSD1	99	88.327	Sus_scrofa
ENSMICG00000017561	RPUSD1	92	76.667	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSMICG00000017561	RPUSD1	98	57.049	ENSTRUG00000003041	rpusd1	97	57.049	Takifugu_rubripes
ENSMICG00000017561	RPUSD1	78	75.490	ENSTNIG00000002660	rpusd1	99	53.667	Tetraodon_nigroviridis
ENSMICG00000017561	RPUSD1	100	87.179	ENSTTRG00000010167	RPUSD1	100	87.179	Tursiops_truncatus
ENSMICG00000017561	RPUSD1	100	83.388	ENSUAMG00000012736	RPUSD1	100	82.736	Ursus_americanus
ENSMICG00000017561	RPUSD1	100	83.388	ENSUMAG00000021174	RPUSD1	100	82.736	Ursus_maritimus
ENSMICG00000017561	RPUSD1	100	83.062	ENSVVUG00000012357	RPUSD1	100	82.736	Vulpes_vulpes
ENSMICG00000017561	RPUSD1	83	77.982	ENSXETG00000007184	rpusd1	100	60.586	Xenopus_tropicalis
ENSMICG00000017561	RPUSD1	98	55.333	ENSXCOG00000017930	rpusd1	98	55.333	Xiphophorus_couchianus
ENSMICG00000017561	RPUSD1	98	56.333	ENSXMAG00000024084	rpusd1	98	56.333	Xiphophorus_maculatus