EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000017862 (Gene tree)
Gene ID: 105886124
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 60663 bases
Position: chr2:65666280-65726942
Accession: 105886124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000016268	ResIII	PF04851.15	9e-08	1	1
ENSMICP00000023434	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000054929	CHD5-201	5793	-	ENSMICP00000023434	1930 (aa)	-	UPI000C2ED1D0
ENSMICT00000017862	CHD5-202	5652	XM_012791554	ENSMICP00000016268	1883 (aa)	XP_012647008	UPI00085B0B3B

Gene Model

Click here to download ENSMICG00000017862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000017862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000017862	CHD5	97	68.360	ENSMICG00000008741	CHD3	92	66.702
ENSMICG00000017862	CHD5	94	72.084	ENSMICG00000006588	-	95	71.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000017862	CHD5	100	92.846	ENSG00000116254	CHD5	100	92.846	Homo_sapiens
ENSMICG00000017862	CHD5	99	94.444	ENSAMEG00000009880	CHD5	99	92.236	Ailuropoda_melanoleuca
ENSMICG00000017862	CHD5	92	81.862	ENSACIG00000012582	chd5	97	78.877	Amphilophus_citrinellus
ENSMICG00000017862	CHD5	93	83.103	ENSAOCG00000020356	chd5	86	83.103	Amphiprion_ocellaris
ENSMICG00000017862	CHD5	94	83.986	ENSAPLG00000015475	CHD5	98	78.534	Anas_platyrhynchos
ENSMICG00000017862	CHD5	99	81.799	ENSACAG00000002441	CHD5	95	83.413	Anolis_carolinensis
ENSMICG00000017862	CHD5	86	92.785	ENSANAG00000001078	CHD5	91	92.021	Aotus_nancymaae
ENSMICG00000017862	CHD5	93	76.093	ENSACLG00000003012	chd5	96	76.038	Astatotilapia_calliptera
ENSMICG00000017862	CHD5	91	78.473	ENSAMXG00000008921	chd5	99	78.559	Astyanax_mexicanus
ENSMICG00000017862	CHD5	93	98.324	ENSBTAG00000040477	CHD5	96	98.393	Bos_taurus
ENSMICG00000017862	CHD5	100	92.594	ENSCJAG00000000101	CHD5	100	92.594	Callithrix_jacchus
ENSMICG00000017862	CHD5	93	93.377	ENSCAFG00000019545	CHD5	100	93.433	Canis_familiaris
ENSMICG00000017862	CHD5	99	93.169	ENSCAFG00020008689	CHD5	97	93.220	Canis_lupus_dingo
ENSMICG00000017862	CHD5	98	97.902	ENSCHIG00000015027	CHD5	98	92.469	Capra_hircus
ENSMICG00000017862	CHD5	98	95.584	ENSTSYG00000033991	CHD5	99	88.251	Carlito_syrichta
ENSMICG00000017862	CHD5	99	91.909	ENSCAPG00000009294	CHD5	99	92.104	Cavia_aperea
ENSMICG00000017862	CHD5	99	91.961	ENSCPOG00000025080	CHD5	99	92.156	Cavia_porcellus
ENSMICG00000017862	CHD5	100	93.003	ENSCCAG00000024756	CHD5	100	93.003	Cebus_capucinus
ENSMICG00000017862	CHD5	100	91.875	ENSCATG00000043011	CHD5	100	91.875	Cercocebus_atys
ENSMICG00000017862	CHD5	99	91.979	ENSCLAG00000010589	CHD5	99	92.031	Chinchilla_lanigera
ENSMICG00000017862	CHD5	100	92.897	ENSCSAG00000000733	CHD5	100	92.897	Chlorocebus_sabaeus
ENSMICG00000017862	CHD5	93	91.129	ENSCPBG00000019363	CHD5	99	90.995	Chrysemys_picta_bellii
ENSMICG00000017862	CHD5	99	93.064	ENSCANG00000032302	CHD5	99	93.064	Colobus_angolensis_palliatus
ENSMICG00000017862	CHD5	56	97.170	ENSCGRG00001011042	Chd5	100	97.170	Cricetulus_griseus_chok1gshd
ENSMICG00000017862	CHD5	99	92.160	ENSCGRG00000011341	Chd5	99	92.344	Cricetulus_griseus_crigri
ENSMICG00000017862	CHD5	96	79.932	ENSDARG00000105083	chd5	96	82.319	Danio_rerio
ENSMICG00000017862	CHD5	94	74.167	ENSDARG00000025789	chd4b	95	74.167	Danio_rerio
ENSMICG00000017862	CHD5	100	87.615	ENSDNOG00000046342	CHD5	100	87.973	Dasypus_novemcinctus
ENSMICG00000017862	CHD5	99	92.535	ENSDORG00000005923	Chd5	99	92.523	Dipodomys_ordii
ENSMICG00000017862	CHD5	99	95.663	ENSEASG00005021464	CHD5	98	93.226	Equus_asinus_asinus
ENSMICG00000017862	CHD5	99	95.217	ENSECAG00000025043	CHD5	98	97.211	Equus_caballus
ENSMICG00000017862	CHD5	75	99.535	ENSEEUG00000002772	CHD5	76	99.526	Erinaceus_europaeus
ENSMICG00000017862	CHD5	93	78.171	ENSELUG00000010742	chd5	95	78.283	Esox_lucius
ENSMICG00000017862	CHD5	100	93.022	ENSFCAG00000006319	CHD5	100	92.714	Felis_catus
ENSMICG00000017862	CHD5	98	91.344	ENSFALG00000009740	CHD5	99	86.166	Ficedula_albicollis
ENSMICG00000017862	CHD5	99	91.809	ENSFDAG00000012881	CHD5	95	92.379	Fukomys_damarensis
ENSMICG00000017862	CHD5	100	90.235	ENSGALG00000000747	CHD5	100	87.142	Gallus_gallus
ENSMICG00000017862	CHD5	58	82.434	ENSGACG00000004389	chd5	93	83.105	Gasterosteus_aculeatus
ENSMICG00000017862	CHD5	95	93.080	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSMICG00000017862	CHD5	99	98.443	ENSGGOG00000000708	CHD5	97	98.443	Gorilla_gorilla
ENSMICG00000017862	CHD5	93	77.722	ENSHBUG00000013453	chd5	96	77.667	Haplochromis_burtoni
ENSMICG00000017862	CHD5	100	91.658	ENSHGLG00000018184	CHD5	100	91.658	Heterocephalus_glaber_female
ENSMICG00000017862	CHD5	99	85.346	ENSHGLG00100013261	CHD5	97	85.570	Heterocephalus_glaber_male
ENSMICG00000017862	CHD5	93	78.950	ENSIPUG00000005446	chd5	98	77.638	Ictalurus_punctatus
ENSMICG00000017862	CHD5	96	97.297	ENSSTOG00000002778	CHD5	95	97.358	Ictidomys_tridecemlineatus
ENSMICG00000017862	CHD5	99	90.877	ENSJJAG00000019072	Chd5	100	89.903	Jaculus_jaculus
ENSMICG00000017862	CHD5	96	80.603	ENSLOCG00000004944	chd5	95	79.968	Lepisosteus_oculatus
ENSMICG00000017862	CHD5	99	97.860	ENSLAFG00000006348	CHD5	97	97.854	Loxodonta_africana
ENSMICG00000017862	CHD5	98	94.720	ENSMFAG00000033993	CHD5	100	92.692	Macaca_fascicularis
ENSMICG00000017862	CHD5	99	92.802	ENSMMUG00000016838	CHD5	99	92.802	Macaca_mulatta
ENSMICG00000017862	CHD5	99	94.720	ENSMNEG00000040044	CHD5	100	92.897	Macaca_nemestrina
ENSMICG00000017862	CHD5	99	94.076	ENSMLEG00000039166	CHD5	100	89.468	Mandrillus_leucophaeus
ENSMICG00000017862	CHD5	93	75.205	ENSMZEG00005000841	chd5	96	74.795	Maylandia_zebra
ENSMICG00000017862	CHD5	99	88.660	ENSMGAG00000001055	CHD5	99	87.538	Meleagris_gallopavo
ENSMICG00000017862	CHD5	99	92.728	ENSMOCG00000011049	Chd5	100	90.569	Microtus_ochrogaster
ENSMICG00000017862	CHD5	85	89.969	ENSMODG00000006294	CHD5	73	94.457	Monodelphis_domestica
ENSMICG00000017862	CHD5	96	78.733	ENSMALG00000002831	chd5	94	81.207	Monopterus_albus
ENSMICG00000017862	CHD5	100	91.961	MGP_CAROLIEiJ_G0026857	Chd5	100	91.347	Mus_caroli
ENSMICG00000017862	CHD5	100	90.835	ENSMUSG00000005045	Chd5	100	90.886	Mus_musculus
ENSMICG00000017862	CHD5	100	91.807	MGP_PahariEiJ_G0029205	Chd5	100	91.193	Mus_pahari
ENSMICG00000017862	CHD5	100	91.128	MGP_SPRETEiJ_G0027850	Chd5	100	91.231	Mus_spretus
ENSMICG00000017862	CHD5	99	97.667	ENSMPUG00000007122	CHD5	94	97.724	Mustela_putorius_furo
ENSMICG00000017862	CHD5	99	91.992	ENSNGAG00000019812	Chd5	96	91.137	Nannospalax_galili
ENSMICG00000017862	CHD5	99	90.627	ENSNLEG00000010320	CHD5	100	90.415	Nomascus_leucogenys
ENSMICG00000017862	CHD5	86	90.114	ENSOPRG00000004304	CHD5	87	90.114	Ochotona_princeps
ENSMICG00000017862	CHD5	99	94.566	ENSODEG00000010262	CHD5	99	91.424	Octodon_degus
ENSMICG00000017862	CHD5	93	80.546	ENSONIG00000000619	chd5	89	80.546	Oreochromis_niloticus
ENSMICG00000017862	CHD5	92	93.536	ENSOANG00000001819	CHD5	93	80.556	Ornithorhynchus_anatinus
ENSMICG00000017862	CHD5	99	96.301	ENSOGAG00000005703	CHD5	97	96.173	Otolemur_garnettii
ENSMICG00000017862	CHD5	97	96.507	ENSOARG00000013425	CHD5	94	96.558	Ovis_aries
ENSMICG00000017862	CHD5	99	95.092	ENSPPAG00000034048	CHD5	100	92.802	Pan_paniscus
ENSMICG00000017862	CHD5	100	92.458	ENSPPRG00000009453	CHD5	100	92.355	Panthera_pardus
ENSMICG00000017862	CHD5	99	88.047	ENSPTIG00000013926	CHD5	99	88.217	Panthera_tigris_altaica
ENSMICG00000017862	CHD5	100	95.092	ENSPTRG00000000075	CHD5	100	92.850	Pan_troglodytes
ENSMICG00000017862	CHD5	99	94.720	ENSPANG00000006765	CHD5	100	92.897	Papio_anubis
ENSMICG00000017862	CHD5	94	79.900	ENSPKIG00000004282	chd5	95	79.807	Paramormyrops_kingsleyae
ENSMICG00000017862	CHD5	95	90.505	ENSPSIG00000006414	CHD5	97	90.684	Pelodiscus_sinensis
ENSMICG00000017862	CHD5	71	96.697	ENSPEMG00000014799	Chd5	100	96.697	Peromyscus_maniculatus_bairdii
ENSMICG00000017862	CHD5	99	89.545	ENSPCIG00000028310	CHD5	100	87.298	Phascolarctos_cinereus
ENSMICG00000017862	CHD5	91	80.374	ENSPLAG00000005343	chd5	91	80.339	Poecilia_latipinna
ENSMICG00000017862	CHD5	99	98.114	ENSPPYG00000001952	CHD5	100	98.114	Pongo_abelii
ENSMICG00000017862	CHD5	100	96.059	ENSPCOG00000022930	CHD5	100	95.957	Propithecus_coquereli
ENSMICG00000017862	CHD5	94	79.863	ENSPNYG00000003183	chd5	94	79.863	Pundamilia_nyererei
ENSMICG00000017862	CHD5	100	92.268	ENSRNOG00000011268	Chd5	100	91.551	Rattus_norvegicus
ENSMICG00000017862	CHD5	94	97.662	ENSRBIG00000032140	CHD5	93	97.662	Rhinopithecus_bieti
ENSMICG00000017862	CHD5	99	92.642	ENSRROG00000041146	CHD5	99	92.642	Rhinopithecus_roxellana
ENSMICG00000017862	CHD5	100	89.749	ENSSBOG00000001955	CHD5	99	92.216	Saimiri_boliviensis_boliviensis
ENSMICG00000017862	CHD5	96	84.002	ENSSHAG00000018641	CHD5	99	84.135	Sarcophilus_harrisii
ENSMICG00000017862	CHD5	97	81.951	ENSSFOG00015006296	chd5	93	79.094	Scleropages_formosus
ENSMICG00000017862	CHD5	95	82.016	ENSSDUG00000017526	chd5	97	79.124	Seriola_dumerili
ENSMICG00000017862	CHD5	95	88.065	ENSSPUG00000010622	CHD5	97	81.965	Sphenodon_punctatus
ENSMICG00000017862	CHD5	98	95.746	ENSSSCG00000003366	CHD5	100	92.889	Sus_scrofa
ENSMICG00000017862	CHD5	93	86.037	ENSTGUG00000002634	-	97	85.978	Taeniopygia_guttata
ENSMICG00000017862	CHD5	54	80.980	ENSTNIG00000004346	chd5	99	81.551	Tetraodon_nigroviridis
ENSMICG00000017862	CHD5	100	90.067	ENSTTRG00000010468	CHD5	100	90.374	Tursiops_truncatus
ENSMICG00000017862	CHD5	98	94.576	ENSUAMG00000024509	CHD5	98	94.576	Ursus_americanus
ENSMICG00000017862	CHD5	98	88.155	ENSUMAG00000024173	CHD5	98	89.897	Ursus_maritimus
ENSMICG00000017862	CHD5	99	91.251	ENSVVUG00000026480	CHD5	99	91.213	Vulpes_vulpes
ENSMICG00000017862	CHD5	96	79.808	ENSXETG00000002904	chd5	99	79.404	Xenopus_tropicalis
ENSMICG00000017862	CHD5	58	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus