EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000026417 (Gene tree)
Gene ID: 105865403
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 44427 bases
Position: chr19:81002840-81047266
Accession: 105865403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000018252	RRM_1	PF00076.22	5.1e-38	1	3
ENSMICP00000018252	RRM_1	PF00076.22	5.1e-38	2	3
ENSMICP00000018252	RRM_1	PF00076.22	5.1e-38	3	3
ENSMICP00000038225	RRM_1	PF00076.22	8.7e-38	1	3
ENSMICP00000038225	RRM_1	PF00076.22	8.7e-38	2	3
ENSMICP00000038225	RRM_1	PF00076.22	8.7e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000033971	RBM47-202	1536	-	ENSMICP00000018252	511 (aa)	-	UPI00085B0AA6
ENSMICT00000038597	RBM47-201	6193	XM_012753913	ENSMICP00000038225	580 (aa)	XP_012609367	UPI000643803E

Gene Model

Click here to download ENSMICG00000026417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000026417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000026417	RBM47	62	54.375	ENSMICG00000000748	HNRNPR	83	45.169
ENSMICG00000026417	RBM47	58	55.482	ENSMICG00000007192	SYNCRIP	79	45.880
ENSMICG00000026417	RBM47	73	61.364	ENSMICG00000003377	A1CF	73	61.503
ENSMICG00000026417	RBM47	59	71.667	ENSMICG00000042747	RBM46	64	71.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000026417	RBM47	100	91.062	ENSG00000163694	RBM47	100	91.171	Homo_sapiens
ENSMICG00000026417	RBM47	100	81.818	ENSAPOG00000011062	rbm47	100	79.357	Acanthochromis_polyacanthus
ENSMICG00000026417	RBM47	100	91.200	ENSAMEG00000009672	RBM47	100	88.758	Ailuropoda_melanoleuca
ENSMICG00000026417	RBM47	100	82.620	ENSACIG00000011531	rbm47	100	79.733	Amphilophus_citrinellus
ENSMICG00000026417	RBM47	100	81.818	ENSAOCG00000022245	rbm47	100	78.933	Amphiprion_ocellaris
ENSMICG00000026417	RBM47	100	79.284	ENSAPEG00000018304	rbm47	100	79.357	Amphiprion_percula
ENSMICG00000026417	RBM47	100	79.949	ENSATEG00000018400	rbm47	94	82.621	Anabas_testudineus
ENSMICG00000026417	RBM47	100	85.979	ENSAPLG00000013974	RBM47	100	81.450	Anas_platyrhynchos
ENSMICG00000026417	RBM47	100	81.432	ENSACAG00000011833	RBM47	100	80.801	Anolis_carolinensis
ENSMICG00000026417	RBM47	100	90.556	ENSANAG00000029440	RBM47	100	89.207	Aotus_nancymaae
ENSMICG00000026417	RBM47	100	80.103	ENSACLG00000016902	rbm47	94	82.621	Astatotilapia_calliptera
ENSMICG00000026417	RBM47	100	78.866	ENSAMXG00000021794	rbm47	94	81.408	Astyanax_mexicanus
ENSMICG00000026417	RBM47	100	91.371	ENSBTAG00000002356	RBM47	100	89.509	Bos_taurus
ENSMICG00000026417	RBM47	96	92.330	ENSCJAG00000019385	RBM47	100	89.226	Callithrix_jacchus
ENSMICG00000026417	RBM47	96	91.501	ENSCAFG00000015898	RBM47	100	90.725	Canis_familiaris
ENSMICG00000026417	RBM47	83	91.224	ENSCAFG00020010558	RBM47	94	90.186	Canis_lupus_dingo
ENSMICG00000026417	RBM47	100	91.781	ENSCHIG00000026214	RBM47	100	89.848	Capra_hircus
ENSMICG00000026417	RBM47	86	79.842	ENSTSYG00000033612	RBM47	93	90.265	Carlito_syrichta
ENSMICG00000026417	RBM47	100	83.784	ENSCAPG00000008426	RBM47	100	82.939	Cavia_aperea
ENSMICG00000026417	RBM47	100	90.667	ENSCPOG00000014100	RBM47	100	88.851	Cavia_porcellus
ENSMICG00000026417	RBM47	99	63.051	ENSCCAG00000024397	-	99	61.735	Cebus_capucinus
ENSMICG00000026417	RBM47	100	90.323	ENSCCAG00000030129	-	100	89.057	Cebus_capucinus
ENSMICG00000026417	RBM47	100	92.164	ENSCATG00000042064	RBM47	100	90.460	Cercocebus_atys
ENSMICG00000026417	RBM47	100	90.667	ENSCLAG00000001684	RBM47	100	89.171	Chinchilla_lanigera
ENSMICG00000026417	RBM47	100	91.231	ENSCSAG00000017060	RBM47	100	89.713	Chlorocebus_sabaeus
ENSMICG00000026417	RBM47	89	93.671	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSMICG00000026417	RBM47	100	85.904	ENSCPBG00000013831	RBM47	100	83.893	Chrysemys_picta_bellii
ENSMICG00000026417	RBM47	100	91.993	ENSCANG00000019997	RBM47	100	90.460	Colobus_angolensis_palliatus
ENSMICG00000026417	RBM47	100	86.243	ENSCGRG00001000623	-	100	84.899	Cricetulus_griseus_chok1gshd
ENSMICG00000026417	RBM47	100	81.298	ENSCGRG00001020102	-	100	79.962	Cricetulus_griseus_chok1gshd
ENSMICG00000026417	RBM47	100	80.916	ENSCGRG00000014760	-	95	82.236	Cricetulus_griseus_crigri
ENSMICG00000026417	RBM47	100	85.714	ENSCGRG00000007762	-	100	84.177	Cricetulus_griseus_crigri
ENSMICG00000026417	RBM47	100	73.737	ENSCSEG00000004545	rbm47	100	76.923	Cynoglossus_semilaevis
ENSMICG00000026417	RBM47	96	83.853	ENSCVAG00000020144	rbm47	100	79.200	Cyprinodon_variegatus
ENSMICG00000026417	RBM47	96	78.910	ENSDARG00000061985	rbm47	94	81.742	Danio_rerio
ENSMICG00000026417	RBM47	100	90.160	ENSDNOG00000046854	RBM47	100	88.927	Dasypus_novemcinctus
ENSMICG00000026417	RBM47	100	89.615	ENSDORG00000010144	Rbm47	100	88.945	Dipodomys_ordii
ENSMICG00000026417	RBM47	100	88.908	ENSETEG00000009194	RBM47	100	87.899	Echinops_telfairi
ENSMICG00000026417	RBM47	99	71.237	ENSEBUG00000011912	rbm47	95	74.419	Eptatretus_burgeri
ENSMICG00000026417	RBM47	100	91.540	ENSEASG00005008443	RBM47	100	89.848	Equus_asinus_asinus
ENSMICG00000026417	RBM47	100	91.540	ENSECAG00000004400	RBM47	100	89.848	Equus_caballus
ENSMICG00000026417	RBM47	72	94.712	ENSEEUG00000001194	RBM47	75	90.043	Erinaceus_europaeus
ENSMICG00000026417	RBM47	99	82.162	ENSELUG00000006148	rbm47	93	83.193	Esox_lucius
ENSMICG00000026417	RBM47	100	91.681	ENSFCAG00000012399	RBM47	100	90.153	Felis_catus
ENSMICG00000026417	RBM47	100	86.436	ENSFALG00000002861	RBM47	100	84.370	Ficedula_albicollis
ENSMICG00000026417	RBM47	100	88.475	ENSFDAG00000016326	RBM47	100	87.288	Fukomys_damarensis
ENSMICG00000026417	RBM47	100	80.412	ENSFHEG00000007938	rbm47	100	73.469	Fundulus_heteroclitus
ENSMICG00000026417	RBM47	100	78.228	ENSGMOG00000014802	rbm47	93	82.303	Gadus_morhua
ENSMICG00000026417	RBM47	73	85.372	ENSGALG00000014267	RBM47	99	85.372	Gallus_gallus
ENSMICG00000026417	RBM47	73	82.353	ENSGAFG00000020571	rbm47	93	82.336	Gambusia_affinis
ENSMICG00000026417	RBM47	100	78.974	ENSGACG00000016223	rbm47	94	80.966	Gasterosteus_aculeatus
ENSMICG00000026417	RBM47	100	85.904	ENSGAGG00000020051	RBM47	100	84.060	Gopherus_agassizii
ENSMICG00000026417	RBM47	100	92.164	ENSGGOG00000001367	RBM47	100	90.460	Gorilla_gorilla
ENSMICG00000026417	RBM47	100	80.103	ENSHBUG00000003520	rbm47	94	82.621	Haplochromis_burtoni
ENSMICG00000026417	RBM47	100	69.866	ENSHGLG00000016914	RBM47	100	85.443	Heterocephalus_glaber_female
ENSMICG00000026417	RBM47	100	79.661	ENSHGLG00100003071	-	100	78.305	Heterocephalus_glaber_male
ENSMICG00000026417	RBM47	100	88.644	ENSHGLG00100014028	-	100	87.288	Heterocephalus_glaber_male
ENSMICG00000026417	RBM47	99	74.958	ENSHCOG00000002074	rbm47	99	77.719	Hippocampus_comes
ENSMICG00000026417	RBM47	100	81.233	ENSIPUG00000004743	rbm47	100	79.088	Ictalurus_punctatus
ENSMICG00000026417	RBM47	100	87.563	ENSSTOG00000004727	RBM47	100	87.899	Ictidomys_tridecemlineatus
ENSMICG00000026417	RBM47	96	91.501	ENSJJAG00000013823	Rbm47	100	87.919	Jaculus_jaculus
ENSMICG00000026417	RBM47	100	81.746	ENSKMAG00000000084	rbm47	94	81.250	Kryptolebias_marmoratus
ENSMICG00000026417	RBM47	100	79.947	ENSLBEG00000008436	rbm47	93	80.857	Labrus_bergylta
ENSMICG00000026417	RBM47	100	82.620	ENSLACG00000007196	RBM47	100	81.356	Latimeria_chalumnae
ENSMICG00000026417	RBM47	96	86.364	ENSLOCG00000012966	rbm47	95	78.912	Lepisosteus_oculatus
ENSMICG00000026417	RBM47	100	89.572	ENSLAFG00000011998	RBM47	100	88.640	Loxodonta_africana
ENSMICG00000026417	RBM47	100	92.164	ENSMFAG00000037967	RBM47	100	90.460	Macaca_fascicularis
ENSMICG00000026417	RBM47	100	91.231	ENSMMUG00000012036	RBM47	100	89.713	Macaca_mulatta
ENSMICG00000026417	RBM47	100	91.993	ENSMNEG00000040774	RBM47	100	90.460	Macaca_nemestrina
ENSMICG00000026417	RBM47	100	91.746	ENSMLEG00000041432	RBM47	100	91.429	Mandrillus_leucophaeus
ENSMICG00000026417	RBM47	100	80.155	ENSMAMG00000019143	rbm47	94	82.621	Mastacembelus_armatus
ENSMICG00000026417	RBM47	100	80.103	ENSMZEG00005023659	rbm47	94	82.621	Maylandia_zebra
ENSMICG00000026417	RBM47	100	85.372	ENSMGAG00000012226	RBM47	100	82.943	Meleagris_gallopavo
ENSMICG00000026417	RBM47	100	86.891	ENSMAUG00000006493	Rbm47	100	86.218	Mesocricetus_auratus
ENSMICG00000026417	RBM47	100	87.374	ENSMOCG00000021170	Rbm47	100	86.700	Microtus_ochrogaster
ENSMICG00000026417	RBM47	100	79.328	ENSMMOG00000007260	rbm47	94	81.534	Mola_mola
ENSMICG00000026417	RBM47	61	80.000	ENSMODG00000015426	-	96	79.221	Monodelphis_domestica
ENSMICG00000026417	RBM47	100	86.207	ENSMODG00000007003	RBM47	100	85.980	Monodelphis_domestica
ENSMICG00000026417	RBM47	100	79.829	ENSMODG00000020561	-	100	79.487	Monodelphis_domestica
ENSMICG00000026417	RBM47	100	78.149	ENSMALG00000005167	rbm47	100	78.933	Monopterus_albus
ENSMICG00000026417	RBM47	100	87.184	MGP_CAROLIEiJ_G0027258	Rbm47	100	86.341	Mus_caroli
ENSMICG00000026417	RBM47	100	87.521	ENSMUSG00000070780	Rbm47	100	86.678	Mus_musculus
ENSMICG00000026417	RBM47	100	87.521	MGP_PahariEiJ_G0017040	Rbm47	100	86.678	Mus_pahari
ENSMICG00000026417	RBM47	100	87.966	MGP_SPRETEiJ_G0028253	Rbm47	100	87.119	Mus_spretus
ENSMICG00000026417	RBM47	100	90.933	ENSMPUG00000006177	RBM47	94	89.376	Mustela_putorius_furo
ENSMICG00000026417	RBM47	100	88.276	ENSMLUG00000000889	RBM47	100	87.648	Myotis_lucifugus
ENSMICG00000026417	RBM47	100	87.766	ENSNGAG00000003325	Rbm47	100	86.891	Nannospalax_galili
ENSMICG00000026417	RBM47	100	80.362	ENSNBRG00000015092	rbm47	94	82.436	Neolamprologus_brichardi
ENSMICG00000026417	RBM47	100	91.823	ENSNLEG00000017151	RBM47	100	90.119	Nomascus_leucogenys
ENSMICG00000026417	RBM47	68	88.952	ENSMEUG00000009516	-	98	83.135	Notamacropus_eugenii
ENSMICG00000026417	RBM47	85	92.500	ENSOPRG00000016507	-	75	90.833	Ochotona_princeps
ENSMICG00000026417	RBM47	100	90.667	ENSODEG00000004873	RBM47	100	89.340	Octodon_degus
ENSMICG00000026417	RBM47	96	85.552	ENSONIG00000009061	rbm47	94	81.921	Oreochromis_niloticus
ENSMICG00000026417	RBM47	100	84.966	ENSOANG00000008978	RBM47	100	84.628	Ornithorhynchus_anatinus
ENSMICG00000026417	RBM47	100	91.781	ENSOCUG00000012034	RBM47	100	91.371	Oryctolagus_cuniculus
ENSMICG00000026417	RBM47	100	81.794	ENSORLG00000005847	rbm47	100	78.457	Oryzias_latipes
ENSMICG00000026417	RBM47	100	81.794	ENSORLG00020005154	rbm47	100	78.457	Oryzias_latipes_hni
ENSMICG00000026417	RBM47	100	82.058	ENSORLG00015000066	rbm47	100	78.723	Oryzias_latipes_hsok
ENSMICG00000026417	RBM47	100	82.275	ENSOMEG00000010730	rbm47	100	79.893	Oryzias_melastigma
ENSMICG00000026417	RBM47	96	92.918	ENSOGAG00000029367	-	100	89.882	Otolemur_garnettii
ENSMICG00000026417	RBM47	100	83.200	ENSOGAG00000025193	-	100	82.343	Otolemur_garnettii
ENSMICG00000026417	RBM47	100	82.741	ENSOARG00000012711	RBM47	100	81.049	Ovis_aries
ENSMICG00000026417	RBM47	100	91.993	ENSPPAG00000029763	RBM47	100	90.290	Pan_paniscus
ENSMICG00000026417	RBM47	100	88.964	ENSPPRG00000012873	RBM47	100	87.436	Panthera_pardus
ENSMICG00000026417	RBM47	85	90.505	ENSPTIG00000017046	RBM47	100	90.101	Panthera_tigris_altaica
ENSMICG00000026417	RBM47	100	92.164	ENSPTRG00000016006	RBM47	100	90.460	Pan_troglodytes
ENSMICG00000026417	RBM47	100	92.164	ENSPANG00000005980	RBM47	100	90.460	Papio_anubis
ENSMICG00000026417	RBM47	99	78.295	ENSPKIG00000013431	RBM47	100	71.864	Paramormyrops_kingsleyae
ENSMICG00000026417	RBM47	96	79.757	ENSPKIG00000005037	rbm47	95	84.091	Paramormyrops_kingsleyae
ENSMICG00000026417	RBM47	89	85.227	ENSPSIG00000017516	RBM47	97	84.280	Pelodiscus_sinensis
ENSMICG00000026417	RBM47	96	86.040	ENSPMGG00000018540	rbm47	100	78.877	Periophthalmus_magnuspinnatus
ENSMICG00000026417	RBM47	100	87.227	ENSPEMG00000011088	Rbm47	100	86.891	Peromyscus_maniculatus_bairdii
ENSMICG00000026417	RBM47	96	85.112	ENSPFOG00000007997	rbm47	94	81.356	Poecilia_formosa
ENSMICG00000026417	RBM47	96	84.831	ENSPLAG00000002072	rbm47	97	82.051	Poecilia_latipinna
ENSMICG00000026417	RBM47	100	82.620	ENSPMEG00000017492	rbm47	97	82.051	Poecilia_mexicana
ENSMICG00000026417	RBM47	96	85.836	ENSPREG00000008456	rbm47	94	82.336	Poecilia_reticulata
ENSMICG00000026417	RBM47	98	79.564	ENSPPYG00000014688	RBM47	98	77.391	Pongo_abelii
ENSMICG00000026417	RBM47	89	91.250	ENSPCAG00000011879	RBM47	81	90.000	Procavia_capensis
ENSMICG00000026417	RBM47	100	93.878	ENSPCOG00000023451	RBM47	100	93.449	Propithecus_coquereli
ENSMICG00000026417	RBM47	100	89.865	ENSPVAG00000003812	RBM47	100	89.226	Pteropus_vampyrus
ENSMICG00000026417	RBM47	100	80.103	ENSPNYG00000022868	rbm47	94	81.921	Pundamilia_nyererei
ENSMICG00000026417	RBM47	96	78.634	ENSPNAG00000007940	rbm47	94	82.535	Pygocentrus_nattereri
ENSMICG00000026417	RBM47	100	87.352	ENSRNOG00000002408	Rbm47	100	86.509	Rattus_norvegicus
ENSMICG00000026417	RBM47	100	91.993	ENSRBIG00000039601	RBM47	100	90.460	Rhinopithecus_bieti
ENSMICG00000026417	RBM47	100	91.993	ENSRROG00000044696	RBM47	100	90.460	Rhinopithecus_roxellana
ENSMICG00000026417	RBM47	100	89.708	ENSSBOG00000028475	RBM47	100	90.269	Saimiri_boliviensis_boliviensis
ENSMICG00000026417	RBM47	100	87.162	ENSSHAG00000017576	RBM47	100	86.102	Sarcophilus_harrisii
ENSMICG00000026417	RBM47	100	73.579	ENSSFOG00015012445	rbm47	94	83.944	Scleropages_formosus
ENSMICG00000026417	RBM47	96	76.801	ENSSFOG00015024101	RBM47	96	75.880	Scleropages_formosus
ENSMICG00000026417	RBM47	100	79.434	ENSSMAG00000009744	rbm47	94	81.197	Scophthalmus_maximus
ENSMICG00000026417	RBM47	100	82.275	ENSSDUG00000022684	rbm47	100	78.989	Seriola_dumerili
ENSMICG00000026417	RBM47	100	82.353	ENSSLDG00000003109	rbm47	100	78.933	Seriola_lalandi_dorsalis
ENSMICG00000026417	RBM47	86	90.625	ENSSARG00000001735	RBM47	75	89.732	Sorex_araneus
ENSMICG00000026417	RBM47	100	85.009	ENSSPUG00000007515	RBM47	100	84.327	Sphenodon_punctatus
ENSMICG00000026417	RBM47	100	80.051	ENSSPAG00000001257	rbm47	100	79.467	Stegastes_partitus
ENSMICG00000026417	RBM47	100	91.371	ENSSSCG00000008796	RBM47	100	89.509	Sus_scrofa
ENSMICG00000026417	RBM47	100	86.436	ENSTGUG00000008705	RBM47	100	84.007	Taeniopygia_guttata
ENSMICG00000026417	RBM47	100	75.593	ENSTRUG00000014050	rbm47	98	74.427	Takifugu_rubripes
ENSMICG00000026417	RBM47	100	79.845	ENSTNIG00000006127	rbm47	94	75.485	Tetraodon_nigroviridis
ENSMICG00000026417	RBM47	88	91.139	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSMICG00000026417	RBM47	100	91.171	ENSTTRG00000002839	RBM47	100	89.643	Tursiops_truncatus
ENSMICG00000026417	RBM47	100	91.200	ENSUAMG00000021346	RBM47	100	89.376	Ursus_americanus
ENSMICG00000026417	RBM47	53	93.548	ENSVPAG00000000641	-	57	91.444	Vicugna_pacos
ENSMICG00000026417	RBM47	96	93.201	ENSVVUG00000014774	RBM47	100	89.527	Vulpes_vulpes
ENSMICG00000026417	RBM47	100	83.862	ENSXETG00000012802	rbm47	100	80.607	Xenopus_tropicalis
ENSMICG00000026417	RBM47	100	75.191	ENSXCOG00000000780	rbm47	97	82.051	Xiphophorus_couchianus
ENSMICG00000026417	RBM47	100	82.086	ENSXMAG00000009874	rbm47	97	81.586	Xiphophorus_maculatus