EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000028179 (Gene tree)
Gene ID: 105855898
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 2772 bases
Position: chr20:1069646-1072417
Accession: 105855898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046372	RRM_1	PF00076.22	1.5e-15	1	1
ENSMICP00000028522	RRM_1	PF00076.22	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000028708	PABPN1L-202	759	-	ENSMICP00000028522	253 (aa)	-	UPI000C2EB751
ENSMICT00000066912	PABPN1L-201	906	XM_012737151	ENSMICP00000046372	275 (aa)	XP_012592605	UPI000642E77A

Gene Model

Click here to download ENSMICG00000028179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000028179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000028179	PABPN1L	53	56.579	ENSMICG00000010002	BCL2L2-PABPN1	88	44.800

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000028179	PABPN1L	100	77.419	ENSG00000205022	PABPN1L	100	78.495	Homo_sapiens
ENSMICG00000028179	PABPN1L	54	57.718	ENSAPOG00000000685	PABPN1L	58	50.521	Acanthochromis_polyacanthus
ENSMICG00000028179	PABPN1L	56	54.878	ENSACIG00000021400	PABPN1L	92	54.878	Amphilophus_citrinellus
ENSMICG00000028179	PABPN1L	59	48.765	ENSAOCG00000019844	PABPN1L	71	49.754	Amphiprion_ocellaris
ENSMICG00000028179	PABPN1L	59	48.765	ENSAPEG00000019534	PABPN1L	71	49.754	Amphiprion_percula
ENSMICG00000028179	PABPN1L	54	56.757	ENSATEG00000011646	PABPN1L	70	48.947	Anabas_testudineus
ENSMICG00000028179	PABPN1L	71	58.247	ENSACAG00000013250	PABPN1L	99	58.247	Anolis_carolinensis
ENSMICG00000028179	PABPN1L	100	70.758	ENSANAG00000038178	PABPN1L	100	72.202	Aotus_nancymaae
ENSMICG00000028179	PABPN1L	73	47.264	ENSACLG00000025147	PABPN1L	71	47.783	Astatotilapia_calliptera
ENSMICG00000028179	PABPN1L	54	54.362	ENSAMXG00000010873	PABPN1L	67	51.685	Astyanax_mexicanus
ENSMICG00000028179	PABPN1L	100	67.384	ENSBTAG00000023752	-	100	68.345	Bos_taurus
ENSMICG00000028179	PABPN1L	52	81.690	ENSBTAG00000006727	-	87	81.690	Bos_taurus
ENSMICG00000028179	PABPN1L	100	71.739	ENSCJAG00000045284	PABPN1L	100	72.924	Callithrix_jacchus
ENSMICG00000028179	PABPN1L	100	64.505	ENSCHIG00000013987	PABPN1L	100	64.041	Capra_hircus
ENSMICG00000028179	PABPN1L	95	69.403	ENSCAPG00000007240	PABPN1L	99	69.776	Cavia_aperea
ENSMICG00000028179	PABPN1L	100	71.273	ENSCPOG00000025951	PABPN1L	100	71.636	Cavia_porcellus
ENSMICG00000028179	PABPN1L	100	72.826	ENSCCAG00000027631	PABPN1L	100	73.646	Cebus_capucinus
ENSMICG00000028179	PABPN1L	100	77.818	ENSCATG00000031060	PABPN1L	100	78.986	Cercocebus_atys
ENSMICG00000028179	PABPN1L	100	72.000	ENSCLAG00000000704	PABPN1L	100	72.000	Chinchilla_lanigera
ENSMICG00000028179	PABPN1L	100	72.603	ENSCSAG00000002881	PABPN1L	100	73.973	Chlorocebus_sabaeus
ENSMICG00000028179	PABPN1L	71	55.612	ENSCPBG00000023441	PABPN1L	61	57.360	Chrysemys_picta_bellii
ENSMICG00000028179	PABPN1L	100	76.812	ENSCANG00000039336	PABPN1L	100	77.978	Colobus_angolensis_palliatus
ENSMICG00000028179	PABPN1L	100	70.545	ENSCGRG00001013211	Pabpn1l	100	70.545	Cricetulus_griseus_chok1gshd
ENSMICG00000028179	PABPN1L	100	70.545	ENSCGRG00000015868	Pabpn1l	100	70.545	Cricetulus_griseus_crigri
ENSMICG00000028179	PABPN1L	100	58.304	ENSDNOG00000034677	PABPN1L	100	59.011	Dasypus_novemcinctus
ENSMICG00000028179	PABPN1L	100	70.863	ENSEASG00005000777	PABPN1L	100	69.314	Equus_asinus_asinus
ENSMICG00000028179	PABPN1L	100	71.223	ENSECAG00000000378	PABPN1L	100	70.144	Equus_caballus
ENSMICG00000028179	PABPN1L	100	61.818	ENSEEUG00000004747	PABPN1L	100	61.818	Erinaceus_europaeus
ENSMICG00000028179	PABPN1L	59	51.852	ENSELUG00000018385	PABPN1L	63	51.786	Esox_lucius
ENSMICG00000028179	PABPN1L	100	69.892	ENSFCAG00000010465	PABPN1L	100	68.705	Felis_catus
ENSMICG00000028179	PABPN1L	73	55.024	ENSFALG00000003319	PABPN1L	80	55.024	Ficedula_albicollis
ENSMICG00000028179	PABPN1L	100	70.182	ENSFDAG00000021067	PABPN1L	100	70.182	Fukomys_damarensis
ENSMICG00000028179	PABPN1L	59	50.307	ENSFHEG00000018295	PABPN1L	71	48.515	Fundulus_heteroclitus
ENSMICG00000028179	PABPN1L	54	66.443	ENSGALG00000006242	PABPN1L	85	66.443	Gallus_gallus
ENSMICG00000028179	PABPN1L	65	57.542	ENSGAGG00000010613	PABPN1L	59	56.983	Gopherus_agassizii
ENSMICG00000028179	PABPN1L	100	76.727	ENSGGOG00000012670	PABPN1L	100	77.536	Gorilla_gorilla
ENSMICG00000028179	PABPN1L	54	56.000	ENSHBUG00000002388	PABPN1L	71	48.276	Haplochromis_burtoni
ENSMICG00000028179	PABPN1L	96	68.061	ENSHGLG00000014207	PABPN1L	100	69.202	Heterocephalus_glaber_female
ENSMICG00000028179	PABPN1L	96	68.061	ENSHGLG00100005230	PABPN1L	100	69.202	Heterocephalus_glaber_male
ENSMICG00000028179	PABPN1L	58	51.553	ENSHCOG00000004151	PABPN1L	69	49.749	Hippocampus_comes
ENSMICG00000028179	PABPN1L	68	50.785	ENSIPUG00000023583	PABPN1L	93	51.010	Ictalurus_punctatus
ENSMICG00000028179	PABPN1L	100	68.214	ENSSTOG00000020814	PABPN1L	100	68.929	Ictidomys_tridecemlineatus
ENSMICG00000028179	PABPN1L	100	69.675	ENSJJAG00000006433	Pabpn1l	100	68.592	Jaculus_jaculus
ENSMICG00000028179	PABPN1L	59	50.307	ENSLBEG00000011647	PABPN1L	69	49.020	Labrus_bergylta
ENSMICG00000028179	PABPN1L	71	68.367	ENSLAFG00000025902	-	78	68.367	Loxodonta_africana
ENSMICG00000028179	PABPN1L	100	77.455	ENSMFAG00000002924	PABPN1L	100	78.623	Macaca_fascicularis
ENSMICG00000028179	PABPN1L	100	76.364	ENSMMUG00000012438	PABPN1L	100	76.449	Macaca_mulatta
ENSMICG00000028179	PABPN1L	100	77.455	ENSMNEG00000044808	PABPN1L	100	78.623	Macaca_nemestrina
ENSMICG00000028179	PABPN1L	100	77.818	ENSMLEG00000032667	PABPN1L	100	78.986	Mandrillus_leucophaeus
ENSMICG00000028179	PABPN1L	73	47.264	ENSMZEG00005002186	PABPN1L	71	47.783	Maylandia_zebra
ENSMICG00000028179	PABPN1L	100	67.273	ENSMAUG00000014032	Pabpn1l	100	68.000	Mesocricetus_auratus
ENSMICG00000028179	PABPN1L	100	70.545	ENSMOCG00000007955	Pabpn1l	100	70.545	Microtus_ochrogaster
ENSMICG00000028179	PABPN1L	100	53.737	ENSMODG00000003873	-	100	53.381	Monodelphis_domestica
ENSMICG00000028179	PABPN1L	61	50.000	ENSMALG00000016926	PABPN1L	71	47.264	Monopterus_albus
ENSMICG00000028179	PABPN1L	100	66.182	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.182	Mus_caroli
ENSMICG00000028179	PABPN1L	100	65.818	ENSMUSG00000069867	Pabpn1l	100	65.818	Mus_musculus
ENSMICG00000028179	PABPN1L	100	66.182	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.182	Mus_pahari
ENSMICG00000028179	PABPN1L	100	65.455	MGP_SPRETEiJ_G0032788	Pabpn1l	100	65.455	Mus_spretus
ENSMICG00000028179	PABPN1L	96	54.182	ENSMLUG00000003228	PABPN1L	95	54.182	Myotis_lucifugus
ENSMICG00000028179	PABPN1L	100	71.273	ENSNGAG00000023992	Pabpn1l	100	71.273	Nannospalax_galili
ENSMICG00000028179	PABPN1L	54	56.000	ENSNBRG00000017078	PABPN1L	64	55.000	Neolamprologus_brichardi
ENSMICG00000028179	PABPN1L	100	72.826	ENSOPRG00000005597	PABPN1L	100	72.826	Ochotona_princeps
ENSMICG00000028179	PABPN1L	100	64.583	ENSODEG00000004649	PABPN1L	100	64.583	Octodon_degus
ENSMICG00000028179	PABPN1L	100	52.899	ENSOANG00000013901	PABPN1L	100	53.986	Ornithorhynchus_anatinus
ENSMICG00000028179	PABPN1L	70	50.000	ENSORLG00000026560	PABPN1L	74	49.246	Oryzias_latipes
ENSMICG00000028179	PABPN1L	70	50.000	ENSORLG00020015068	PABPN1L	74	49.246	Oryzias_latipes_hni
ENSMICG00000028179	PABPN1L	70	50.000	ENSORLG00015000397	PABPN1L	74	49.246	Oryzias_latipes_hsok
ENSMICG00000028179	PABPN1L	73	48.058	ENSOMEG00000017896	PABPN1L	55	48.058	Oryzias_melastigma
ENSMICG00000028179	PABPN1L	100	80.000	ENSOGAG00000000433	PABPN1L	100	78.909	Otolemur_garnettii
ENSMICG00000028179	PABPN1L	100	67.327	ENSOARG00000013682	PABPN1L	100	68.543	Ovis_aries
ENSMICG00000028179	PABPN1L	100	76.344	ENSPPAG00000028866	PABPN1L	100	77.419	Pan_paniscus
ENSMICG00000028179	PABPN1L	100	69.892	ENSPPRG00000015106	PABPN1L	100	68.705	Panthera_pardus
ENSMICG00000028179	PABPN1L	93	63.813	ENSPTIG00000015606	PABPN1L	100	62.692	Panthera_tigris_altaica
ENSMICG00000028179	PABPN1L	100	76.344	ENSPTRG00000031120	PABPN1L	100	77.419	Pan_troglodytes
ENSMICG00000028179	PABPN1L	100	77.455	ENSPANG00000026039	PABPN1L	100	78.623	Papio_anubis
ENSMICG00000028179	PABPN1L	70	54.315	ENSPSIG00000003404	PABPN1L	100	55.838	Pelodiscus_sinensis
ENSMICG00000028179	PABPN1L	51	59.859	ENSPMGG00000013927	PABPN1L	73	59.259	Periophthalmus_magnuspinnatus
ENSMICG00000028179	PABPN1L	100	69.818	ENSPEMG00000016624	Pabpn1l	100	69.818	Peromyscus_maniculatus_bairdii
ENSMICG00000028179	PABPN1L	52	63.946	ENSPCIG00000007038	-	100	63.946	Phascolarctos_cinereus
ENSMICG00000028179	PABPN1L	100	76.978	ENSPPYG00000007655	PABPN1L	100	78.136	Pongo_abelii
ENSMICG00000028179	PABPN1L	100	84.727	ENSPCOG00000024077	PABPN1L	100	84.727	Propithecus_coquereli
ENSMICG00000028179	PABPN1L	100	68.440	ENSPVAG00000002716	PABPN1L	100	68.085	Pteropus_vampyrus
ENSMICG00000028179	PABPN1L	73	47.264	ENSPNYG00000004803	PABPN1L	71	47.783	Pundamilia_nyererei
ENSMICG00000028179	PABPN1L	100	69.818	ENSRNOG00000029558	Pabpn1l	100	69.818	Rattus_norvegicus
ENSMICG00000028179	PABPN1L	100	77.455	ENSRBIG00000030740	PABPN1L	100	78.623	Rhinopithecus_bieti
ENSMICG00000028179	PABPN1L	99	77.737	ENSRROG00000035483	-	99	78.909	Rhinopithecus_roxellana
ENSMICG00000028179	PABPN1L	100	78.261	ENSRROG00000032240	-	100	78.623	Rhinopithecus_roxellana
ENSMICG00000028179	PABPN1L	100	72.826	ENSSBOG00000018410	PABPN1L	100	74.368	Saimiri_boliviensis_boliviensis
ENSMICG00000028179	PABPN1L	100	52.265	ENSSHAG00000010001	-	100	52.203	Sarcophilus_harrisii
ENSMICG00000028179	PABPN1L	59	50.307	ENSSMAG00000021348	PABPN1L	72	49.515	Scophthalmus_maximus
ENSMICG00000028179	PABPN1L	59	49.693	ENSSDUG00000006986	PABPN1L	75	47.030	Seriola_dumerili
ENSMICG00000028179	PABPN1L	59	50.307	ENSSLDG00000021845	PABPN1L	75	47.525	Seriola_lalandi_dorsalis
ENSMICG00000028179	PABPN1L	94	51.351	ENSSARG00000005178	-	99	49.807	Sorex_araneus
ENSMICG00000028179	PABPN1L	70	58.031	ENSSPUG00000007031	PABPN1L	84	57.732	Sphenodon_punctatus
ENSMICG00000028179	PABPN1L	73	48.259	ENSSPAG00000017978	PABPN1L	71	48.756	Stegastes_partitus
ENSMICG00000028179	PABPN1L	100	71.886	ENSSSCG00000036367	PABPN1L	100	72.887	Sus_scrofa
ENSMICG00000028179	PABPN1L	59	50.307	ENSTRUG00000024725	PABPN1L	80	49.010	Takifugu_rubripes
ENSMICG00000028179	PABPN1L	100	71.583	ENSTTRG00000004691	PABPN1L	100	72.302	Tursiops_truncatus
ENSMICG00000028179	PABPN1L	56	52.174	ENSXETG00000011258	pabpn1l	92	51.923	Xenopus_tropicalis