EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000028252 (Gene tree)
Gene ID: 105880699
Gene Symbol: -
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 9760 bases
Position: chr8:62239772-62249531
Accession: 105880699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000036779	RRM_1	PF00076.22	4.9e-15	1	1
ENSMICP00000036779	RRM_3	PF08777.11	8e-31	1	1
ENSMICP00000036779	La	PF05383.17	8.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000051597	-	1677	XM_012781907	ENSMICP00000036779	406 (aa)	XP_012637361	UPI000643701C

Gene Model

Click here to download ENSMICG00000028252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000028252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000028252	-	99	89.356	ENSMICG00000033304	-	95	93.011

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000028252	-	99	96.059	ENSG00000138385	SSB	100	99.167	Homo_sapiens
ENSMICG00000028252	-	98	54.975	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSMICG00000028252	-	99	91.627	ENSAMEG00000010507	SSB	99	91.627	Ailuropoda_melanoleuca
ENSMICG00000028252	-	92	58.556	ENSACIG00000001738	ssb	97	58.556	Amphilophus_citrinellus
ENSMICG00000028252	-	98	55.224	ENSAOCG00000020398	ssb	100	55.911	Amphiprion_ocellaris
ENSMICG00000028252	-	98	55.473	ENSAPEG00000020395	ssb	100	56.158	Amphiprion_percula
ENSMICG00000028252	-	99	58.128	ENSATEG00000016884	ssb	100	58.621	Anabas_testudineus
ENSMICG00000028252	-	99	70.755	ENSAPLG00000006109	SSB	99	72.235	Anas_platyrhynchos
ENSMICG00000028252	-	99	67.402	ENSACAG00000017008	SSB	99	67.402	Anolis_carolinensis
ENSMICG00000028252	-	99	86.849	ENSANAG00000027195	-	99	86.849	Aotus_nancymaae
ENSMICG00000028252	-	99	55.446	ENSACLG00000010798	ssb	100	55.198	Astatotilapia_calliptera
ENSMICG00000028252	-	98	55.392	ENSAMXG00000012606	ssb	100	56.174	Astyanax_mexicanus
ENSMICG00000028252	-	99	95.037	ENSBTAG00000008716	SSB	99	95.037	Bos_taurus
ENSMICG00000028252	-	73	35.099	WBGene00016653	C44E4.4	91	33.424	Caenorhabditis_elegans
ENSMICG00000028252	-	99	96.030	ENSCJAG00000045073	SSB	99	96.030	Callithrix_jacchus
ENSMICG00000028252	-	99	95.050	ENSCAFG00000012418	SSB	99	95.050	Canis_familiaris
ENSMICG00000028252	-	99	95.050	ENSCAFG00020002900	SSB	99	95.050	Canis_lupus_dingo
ENSMICG00000028252	-	99	89.082	ENSCHIG00000022196	-	99	89.082	Capra_hircus
ENSMICG00000028252	-	99	95.037	ENSCHIG00000022624	-	99	95.037	Capra_hircus
ENSMICG00000028252	-	99	96.509	ENSTSYG00000000097	SSB	99	96.509	Carlito_syrichta
ENSMICG00000028252	-	99	96.774	ENSCPOG00000003338	SSB	99	96.774	Cavia_porcellus
ENSMICG00000028252	-	99	96.526	ENSCCAG00000035147	SSB	99	96.526	Cebus_capucinus
ENSMICG00000028252	-	99	74.690	ENSCATG00000036701	SSB	99	74.194	Cercocebus_atys
ENSMICG00000028252	-	99	70.968	ENSCATG00000042909	-	99	69.727	Cercocebus_atys
ENSMICG00000028252	-	99	96.526	ENSCLAG00000015617	-	99	96.526	Chinchilla_lanigera
ENSMICG00000028252	-	98	87.406	ENSCSAG00000018390	-	100	87.406	Chlorocebus_sabaeus
ENSMICG00000028252	-	99	96.278	ENSCSAG00000015200	SSB	88	96.278	Chlorocebus_sabaeus
ENSMICG00000028252	-	99	95.285	ENSCHOG00000007763	SSB	99	95.285	Choloepus_hoffmanni
ENSMICG00000028252	-	99	80.344	ENSCPBG00000006519	SSB	99	80.590	Chrysemys_picta_bellii
ENSMICG00000028252	-	98	75.188	ENSCANG00000028838	-	95	75.188	Colobus_angolensis_palliatus
ENSMICG00000028252	-	99	96.278	ENSCANG00000027695	SSB	99	96.278	Colobus_angolensis_palliatus
ENSMICG00000028252	-	99	82.090	ENSCANG00000033240	-	99	82.090	Colobus_angolensis_palliatus
ENSMICG00000028252	-	99	79.607	ENSCGRG00001024831	Ssb	99	80.835	Cricetulus_griseus_chok1gshd
ENSMICG00000028252	-	99	79.607	ENSCGRG00000005387	Ssb	99	80.835	Cricetulus_griseus_crigri
ENSMICG00000028252	-	98	57.250	ENSCSEG00000011599	ssb	99	58.000	Cynoglossus_semilaevis
ENSMICG00000028252	-	99	57.002	ENSCVAG00000021558	ssb	100	57.494	Cyprinodon_variegatus
ENSMICG00000028252	-	98	56.824	ENSDARG00000029252	ssb	99	57.214	Danio_rerio
ENSMICG00000028252	-	99	95.285	ENSDNOG00000013450	SSB	99	95.285	Dasypus_novemcinctus
ENSMICG00000028252	-	99	85.086	ENSDORG00000005543	Ssb	99	85.086	Dipodomys_ordii
ENSMICG00000028252	-	83	34.384	FBgn0011638	La	86	34.831	Drosophila_melanogaster
ENSMICG00000028252	-	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSMICG00000028252	-	96	48.980	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSMICG00000028252	-	99	96.526	ENSEASG00005022835	SSB	99	96.526	Equus_asinus_asinus
ENSMICG00000028252	-	99	96.526	ENSECAG00000018495	SSB	99	96.526	Equus_caballus
ENSMICG00000028252	-	82	84.615	ENSEEUG00000008077	SSB	86	84.615	Erinaceus_europaeus
ENSMICG00000028252	-	98	60.050	ENSELUG00000020929	ssb	100	60.539	Esox_lucius
ENSMICG00000028252	-	99	95.792	ENSFCAG00000011601	SSB	99	95.792	Felis_catus
ENSMICG00000028252	-	99	74.265	ENSFALG00000000930	SSB	99	75.430	Ficedula_albicollis
ENSMICG00000028252	-	99	96.278	ENSFDAG00000000598	SSB	99	96.278	Fukomys_damarensis
ENSMICG00000028252	-	72	54.515	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSMICG00000028252	-	97	54.455	ENSGMOG00000002664	ssb	99	54.950	Gadus_morhua
ENSMICG00000028252	-	99	75.795	ENSGALG00000009677	SSB	99	75.795	Gallus_gallus
ENSMICG00000028252	-	99	55.911	ENSGAFG00000002749	ssb	100	56.158	Gambusia_affinis
ENSMICG00000028252	-	99	54.369	ENSGACG00000005107	ssb	100	54.722	Gasterosteus_aculeatus
ENSMICG00000028252	-	99	79.607	ENSGAGG00000007807	SSB	99	79.853	Gopherus_agassizii
ENSMICG00000028252	-	99	80.149	ENSGGOG00000024891	-	99	80.149	Gorilla_gorilla
ENSMICG00000028252	-	62	92.825	ENSGGOG00000023471	-	99	92.825	Gorilla_gorilla
ENSMICG00000028252	-	99	54.950	ENSHBUG00000006584	ssb	100	54.703	Haplochromis_burtoni
ENSMICG00000028252	-	99	87.901	ENSHGLG00000004478	-	99	87.901	Heterocephalus_glaber_female
ENSMICG00000028252	-	99	95.122	ENSHGLG00000017580	-	99	95.122	Heterocephalus_glaber_female
ENSMICG00000028252	-	99	87.097	ENSHGLG00000005832	-	99	87.097	Heterocephalus_glaber_female
ENSMICG00000028252	-	99	95.122	ENSHGLG00100003084	-	99	95.122	Heterocephalus_glaber_male
ENSMICG00000028252	-	99	82.630	ENSHGLG00100008767	-	99	82.630	Heterocephalus_glaber_male
ENSMICG00000028252	-	97	56.171	ENSHCOG00000019011	ssb	99	56.423	Hippocampus_comes
ENSMICG00000028252	-	97	57.960	ENSIPUG00000003681	SSB	99	58.416	Ictalurus_punctatus
ENSMICG00000028252	-	99	96.526	ENSSTOG00000008416	SSB	99	96.526	Ictidomys_tridecemlineatus
ENSMICG00000028252	-	99	80.714	ENSJJAG00000023158	-	99	79.762	Jaculus_jaculus
ENSMICG00000028252	-	99	68.408	ENSJJAG00000016250	-	99	68.408	Jaculus_jaculus
ENSMICG00000028252	-	99	56.404	ENSKMAG00000017317	ssb	100	56.897	Kryptolebias_marmoratus
ENSMICG00000028252	-	98	54.229	ENSLBEG00000017345	ssb	100	55.172	Labrus_bergylta
ENSMICG00000028252	-	100	66.748	ENSLACG00000014056	SSB	100	69.512	Latimeria_chalumnae
ENSMICG00000028252	-	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSMICG00000028252	-	99	86.905	ENSLAFG00000000867	-	99	89.762	Loxodonta_africana
ENSMICG00000028252	-	74	69.536	ENSLAFG00000026721	-	99	69.536	Loxodonta_africana
ENSMICG00000028252	-	99	80.149	ENSLAFG00000028909	-	99	80.149	Loxodonta_africana
ENSMICG00000028252	-	99	96.526	ENSMFAG00000039066	SSB	99	96.526	Macaca_fascicularis
ENSMICG00000028252	-	88	82.073	ENSMFAG00000041478	-	100	80.392	Macaca_fascicularis
ENSMICG00000028252	-	99	66.833	ENSMMUG00000039889	-	99	65.835	Macaca_mulatta
ENSMICG00000028252	-	99	81.343	ENSMMUG00000011724	-	97	81.343	Macaca_mulatta
ENSMICG00000028252	-	99	96.526	ENSMMUG00000023051	SSB	99	96.526	Macaca_mulatta
ENSMICG00000028252	-	88	82.073	ENSMNEG00000034698	-	100	80.392	Macaca_nemestrina
ENSMICG00000028252	-	99	84.559	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSMICG00000028252	-	99	68.657	ENSMLEG00000042644	-	99	67.164	Mandrillus_leucophaeus
ENSMICG00000028252	-	99	96.526	ENSMLEG00000035717	SSB	99	96.526	Mandrillus_leucophaeus
ENSMICG00000028252	-	99	58.867	ENSMAMG00000004800	ssb	100	59.360	Mastacembelus_armatus
ENSMICG00000028252	-	99	55.446	ENSMZEG00005005749	ssb	100	55.198	Maylandia_zebra
ENSMICG00000028252	-	99	75.184	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSMICG00000028252	-	99	63.524	ENSMODG00000007027	-	99	63.524	Monodelphis_domestica
ENSMICG00000028252	-	99	78.692	ENSMODG00000008227	-	99	79.419	Monodelphis_domestica
ENSMICG00000028252	-	99	55.283	ENSMODG00000019271	-	99	55.528	Monodelphis_domestica
ENSMICG00000028252	-	90	58.856	ENSMALG00000008045	ssb	90	59.151	Monopterus_albus
ENSMICG00000028252	-	99	78.230	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSMICG00000028252	-	99	77.512	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSMICG00000028252	-	99	77.512	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSMICG00000028252	-	99	77.512	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSMICG00000028252	-	99	95.782	ENSMPUG00000000785	SSB	99	95.782	Mustela_putorius_furo
ENSMICG00000028252	-	99	89.713	ENSMLUG00000016316	SSB	99	89.713	Myotis_lucifugus
ENSMICG00000028252	-	99	55.693	ENSNBRG00000012661	ssb	100	55.446	Neolamprologus_brichardi
ENSMICG00000028252	-	99	68.564	ENSNLEG00000028754	-	99	68.564	Nomascus_leucogenys
ENSMICG00000028252	-	99	96.774	ENSNLEG00000004958	SSB	99	96.774	Nomascus_leucogenys
ENSMICG00000028252	-	61	87.500	ENSMEUG00000001650	-	100	87.500	Notamacropus_eugenii
ENSMICG00000028252	-	71	70.833	ENSOPRG00000008475	-	99	75.000	Ochotona_princeps
ENSMICG00000028252	-	93	89.628	ENSODEG00000004202	-	99	89.628	Octodon_degus
ENSMICG00000028252	-	99	55.198	ENSONIG00000008776	ssb	100	54.950	Oreochromis_niloticus
ENSMICG00000028252	-	99	84.577	ENSOANG00000008543	SSB	99	84.577	Ornithorhynchus_anatinus
ENSMICG00000028252	-	99	95.533	ENSOCUG00000010396	SSB	99	95.533	Oryctolagus_cuniculus
ENSMICG00000028252	-	99	58.128	ENSORLG00000017208	ssb	100	58.374	Oryzias_latipes
ENSMICG00000028252	-	99	58.128	ENSORLG00020022574	ssb	100	58.374	Oryzias_latipes_hni
ENSMICG00000028252	-	99	57.882	ENSORLG00015016592	ssb	100	58.128	Oryzias_latipes_hsok
ENSMICG00000028252	-	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSMICG00000028252	-	99	90.476	ENSOGAG00000029768	SSB	99	90.476	Otolemur_garnettii
ENSMICG00000028252	-	99	94.541	ENSOARG00000002906	SSB	99	94.541	Ovis_aries
ENSMICG00000028252	-	99	96.059	ENSPPAG00000042673	SSB	99	96.059	Pan_paniscus
ENSMICG00000028252	-	99	79.156	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSMICG00000028252	-	96	75.448	ENSPPAG00000006189	-	95	78.049	Pan_paniscus
ENSMICG00000028252	-	99	95.792	ENSPPRG00000006599	SSB	99	95.792	Panthera_pardus
ENSMICG00000028252	-	99	95.545	ENSPTIG00000011021	SSB	97	95.545	Panthera_tigris_altaica
ENSMICG00000028252	-	99	96.059	ENSPTRG00000012620	SSB	99	96.059	Pan_troglodytes
ENSMICG00000028252	-	99	75.682	ENSPTRG00000042880	-	99	73.945	Pan_troglodytes
ENSMICG00000028252	-	99	96.526	ENSPANG00000007440	SSB	99	96.526	Papio_anubis
ENSMICG00000028252	-	98	67.168	ENSPANG00000031877	-	95	65.664	Papio_anubis
ENSMICG00000028252	-	99	68.238	ENSPANG00000034126	-	99	68.734	Papio_anubis
ENSMICG00000028252	-	98	62.344	ENSPKIG00000019325	ssb	99	63.210	Paramormyrops_kingsleyae
ENSMICG00000028252	-	99	76.413	ENSPSIG00000002265	SSB	93	77.150	Pelodiscus_sinensis
ENSMICG00000028252	-	84	55.620	ENSPMGG00000020075	ssb	91	55.908	Periophthalmus_magnuspinnatus
ENSMICG00000028252	-	81	50.606	ENSPMAG00000002982	ssb	100	45.940	Petromyzon_marinus
ENSMICG00000028252	-	99	83.168	ENSPCIG00000028591	-	99	83.416	Phascolarctos_cinereus
ENSMICG00000028252	-	99	56.897	ENSPFOG00000009650	ssb	100	57.143	Poecilia_formosa
ENSMICG00000028252	-	99	56.650	ENSPLAG00000020498	ssb	100	56.897	Poecilia_latipinna
ENSMICG00000028252	-	99	56.404	ENSPMEG00000001051	ssb	100	56.897	Poecilia_mexicana
ENSMICG00000028252	-	94	57.031	ENSPREG00000003708	ssb	99	57.292	Poecilia_reticulata
ENSMICG00000028252	-	99	96.774	ENSPPYG00000012919	SSB	99	96.774	Pongo_abelii
ENSMICG00000028252	-	94	90.026	ENSPCAG00000010276	SSB	99	90.026	Procavia_capensis
ENSMICG00000028252	-	99	86.352	ENSPCOG00000023189	-	99	86.352	Propithecus_coquereli
ENSMICG00000028252	-	99	94.541	ENSPCOG00000015741	-	99	94.541	Propithecus_coquereli
ENSMICG00000028252	-	87	95.198	ENSPVAG00000006615	SSB	100	95.198	Pteropus_vampyrus
ENSMICG00000028252	-	99	55.446	ENSPNYG00000006444	ssb	100	55.198	Pundamilia_nyererei
ENSMICG00000028252	-	98	57.143	ENSPNAG00000011708	ssb	100	58.252	Pygocentrus_nattereri
ENSMICG00000028252	-	99	79.259	ENSRNOG00000011606	AABR07061825.1	99	79.259	Rattus_norvegicus
ENSMICG00000028252	-	99	78.469	ENSRNOG00000007998	Ssb	99	78.469	Rattus_norvegicus
ENSMICG00000028252	-	99	69.554	ENSRBIG00000029918	-	99	67.822	Rhinopithecus_bieti
ENSMICG00000028252	-	93	80.585	ENSRBIG00000041232	-	98	80.585	Rhinopithecus_bieti
ENSMICG00000028252	-	99	79.657	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSMICG00000028252	-	88	88.056	ENSRBIG00000041608	-	98	88.056	Rhinopithecus_bieti
ENSMICG00000028252	-	97	81.679	ENSRROG00000031684	-	99	81.679	Rhinopithecus_roxellana
ENSMICG00000028252	-	99	96.278	ENSRROG00000040346	SSB	99	96.278	Rhinopithecus_roxellana
ENSMICG00000028252	-	97	86.432	ENSRROG00000034102	-	97	86.364	Rhinopithecus_roxellana
ENSMICG00000028252	-	99	79.455	ENSRROG00000007149	-	99	79.455	Rhinopithecus_roxellana
ENSMICG00000028252	-	99	97.022	ENSSBOG00000027204	SSB	99	97.022	Saimiri_boliviensis_boliviensis
ENSMICG00000028252	-	99	83.168	ENSSHAG00000018062	SSB	99	83.416	Sarcophilus_harrisii
ENSMICG00000028252	-	99	64.865	ENSSFOG00015000550	ssb	99	65.356	Scleropages_formosus
ENSMICG00000028252	-	98	53.885	ENSSMAG00000013885	ssb	99	57.487	Scophthalmus_maximus
ENSMICG00000028252	-	99	57.389	ENSSDUG00000020117	ssb	100	57.635	Seriola_dumerili
ENSMICG00000028252	-	99	55.583	ENSSLDG00000002525	ssb	100	55.335	Seriola_lalandi_dorsalis
ENSMICG00000028252	-	94	86.352	ENSSARG00000007747	SSB	99	86.352	Sorex_araneus
ENSMICG00000028252	-	99	77.037	ENSSPUG00000012112	SSB	99	77.037	Sphenodon_punctatus
ENSMICG00000028252	-	98	55.473	ENSSPAG00000005696	ssb	100	56.158	Stegastes_partitus
ENSMICG00000028252	-	98	77.582	ENSSSCG00000015938	SSB	98	77.638	Sus_scrofa
ENSMICG00000028252	-	99	75.430	ENSTGUG00000007942	SSB	99	75.430	Taeniopygia_guttata
ENSMICG00000028252	-	99	57.921	ENSTRUG00000017839	ssb	100	58.272	Takifugu_rubripes
ENSMICG00000028252	-	90	59.783	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSMICG00000028252	-	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSMICG00000028252	-	99	94.802	ENSTTRG00000002152	SSB	99	94.802	Tursiops_truncatus
ENSMICG00000028252	-	93	96.552	ENSUAMG00000027833	SSB	99	96.552	Ursus_americanus
ENSMICG00000028252	-	99	95.545	ENSUMAG00000013907	SSB	99	95.545	Ursus_maritimus
ENSMICG00000028252	-	99	94.789	ENSVPAG00000007183	SSB	99	94.789	Vicugna_pacos
ENSMICG00000028252	-	99	95.050	ENSVVUG00000016573	SSB	77	95.050	Vulpes_vulpes
ENSMICG00000028252	-	99	58.962	ENSXETG00000025402	ssb	99	60.706	Xenopus_tropicalis
ENSMICG00000028252	-	94	55.091	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSMICG00000028252	-	99	55.911	ENSXMAG00000004888	ssb	100	56.158	Xiphophorus_maculatus