EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000028586 (Gene tree)
Gene ID: 105883555
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 99838 bases
Position: chr16:32451808-32551645
Accession: 105883555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000049730	zf-C2H2_jaz	PF12171.8	3.3e-06	1	1
ENSMICP00000050333	zf-C2H2_jaz	PF12171.8	3.5e-06	1	1
ENSMICP00000035537	zf-C2H2_jaz	PF12171.8	3.5e-06	1	1
ENSMICP00000050333	G-patch	PF01585.23	3.4e-13	1	1
ENSMICP00000035537	G-patch	PF01585.23	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000066635	GPATCH8-202	6803	XM_012786733	ENSMICP00000049730	1421 (aa)	XP_012642187	UPI000643C38E
ENSMICT00000033629	GPATCH8-201	7162	XM_012786732	ENSMICP00000035537	1499 (aa)	XP_012642186	UPI0006431FE6
ENSMICT00000064813	GPATCH8-203	4488	-	ENSMICP00000050333	1495 (aa)	-	UPI000C2EA70E

Gene Model

Click here to download ENSMICG00000028586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000028586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000028586	GPATCH8	100	95.606	ENSG00000186566	GPATCH8	100	95.606	Homo_sapiens
ENSMICG00000028586	GPATCH8	100	92.842	ENSAMEG00000018376	GPATCH8	99	93.071	Ailuropoda_melanoleuca
ENSMICG00000028586	GPATCH8	55	64.813	ENSAPLG00000003095	GPATCH8	54	64.813	Anas_platyrhynchos
ENSMICG00000028586	GPATCH8	100	64.370	ENSACAG00000012522	GPATCH8	54	59.193	Anolis_carolinensis
ENSMICG00000028586	GPATCH8	100	94.674	ENSANAG00000032773	GPATCH8	100	93.076	Aotus_nancymaae
ENSMICG00000028586	GPATCH8	100	92.909	ENSBTAG00000038316	GPATCH8	100	92.180	Bos_taurus
ENSMICG00000028586	GPATCH8	100	94.141	ENSCJAG00000009807	GPATCH8	100	92.543	Callithrix_jacchus
ENSMICG00000028586	GPATCH8	100	92.016	ENSCAFG00000014136	GPATCH8	100	93.679	Canis_familiaris
ENSMICG00000028586	GPATCH8	100	91.579	ENSCAFG00020009830	GPATCH8	99	93.624	Canis_lupus_dingo
ENSMICG00000028586	GPATCH8	100	92.442	ENSCHIG00000008962	GPATCH8	99	92.035	Capra_hircus
ENSMICG00000028586	GPATCH8	100	87.973	ENSTSYG00000033153	GPATCH8	100	86.379	Carlito_syrichta
ENSMICG00000028586	GPATCH8	100	95.073	ENSCCAG00000030686	GPATCH8	100	95.073	Cebus_capucinus
ENSMICG00000028586	GPATCH8	100	95.273	ENSCATG00000028156	GPATCH8	100	93.675	Cercocebus_atys
ENSMICG00000028586	GPATCH8	100	94.874	ENSCSAG00000003586	GPATCH8	100	93.276	Chlorocebus_sabaeus
ENSMICG00000028586	GPATCH8	100	69.286	ENSCPBG00000008955	GPATCH8	55	65.279	Chrysemys_picta_bellii
ENSMICG00000028586	GPATCH8	100	95.473	ENSCANG00000039731	GPATCH8	100	95.473	Colobus_angolensis_palliatus
ENSMICG00000028586	GPATCH8	100	88.660	ENSCGRG00001020210	Gpatch8	100	88.403	Cricetulus_griseus_chok1gshd
ENSMICG00000028586	GPATCH8	100	88.660	ENSCGRG00000017090	Gpatch8	100	88.403	Cricetulus_griseus_crigri
ENSMICG00000028586	GPATCH8	100	90.833	ENSDNOG00000005102	GPATCH8	100	89.854	Dasypus_novemcinctus
ENSMICG00000028586	GPATCH8	100	91.518	ENSDORG00000027664	Gpatch8	100	90.524	Dipodomys_ordii
ENSMICG00000028586	GPATCH8	99	87.350	ENSETEG00000001325	GPATCH8	100	84.621	Echinops_telfairi
ENSMICG00000028586	GPATCH8	67	47.360	ENSEBUG00000005749	gpatch8	70	49.082	Eptatretus_burgeri
ENSMICG00000028586	GPATCH8	100	93.675	ENSEASG00005010264	GPATCH8	92	93.675	Equus_asinus_asinus
ENSMICG00000028586	GPATCH8	100	93.609	ENSECAG00000040232	GPATCH8	99	93.609	Equus_caballus
ENSMICG00000028586	GPATCH8	94	100.000	ENSEEUG00000008586	GPATCH8	94	100.000	Erinaceus_europaeus
ENSMICG00000028586	GPATCH8	55	92.048	ENSFCAG00000043334	GPATCH8	56	92.048	Felis_catus
ENSMICG00000028586	GPATCH8	99	66.667	ENSFALG00000009554	GPATCH8	54	64.656	Ficedula_albicollis
ENSMICG00000028586	GPATCH8	99	64.702	ENSGALG00000041556	GPATCH8	52	63.097	Gallus_gallus
ENSMICG00000028586	GPATCH8	100	68.746	ENSGAGG00000008358	GPATCH8	55	64.362	Gopherus_agassizii
ENSMICG00000028586	GPATCH8	100	93.475	ENSGGOG00000013860	GPATCH8	100	93.475	Gorilla_gorilla
ENSMICG00000028586	GPATCH8	100	75.780	ENSHGLG00000017687	GPATCH8	55	69.820	Heterocephalus_glaber_female
ENSMICG00000028586	GPATCH8	76	76.403	ENSHGLG00100010738	GPATCH8	99	76.403	Heterocephalus_glaber_male
ENSMICG00000028586	GPATCH8	100	93.090	ENSSTOG00000025022	GPATCH8	100	92.359	Ictidomys_tridecemlineatus
ENSMICG00000028586	GPATCH8	100	89.317	ENSJJAG00000017797	Gpatch8	100	88.985	Jaculus_jaculus
ENSMICG00000028586	GPATCH8	51	57.089	ENSLACG00000017530	GPATCH8	54	56.383	Latimeria_chalumnae
ENSMICG00000028586	GPATCH8	85	89.151	ENSLAFG00000032250	GPATCH8	100	87.893	Loxodonta_africana
ENSMICG00000028586	GPATCH8	100	95.273	ENSMFAG00000039126	GPATCH8	100	93.675	Macaca_fascicularis
ENSMICG00000028586	GPATCH8	100	95.273	ENSMMUG00000012658	GPATCH8	100	93.675	Macaca_mulatta
ENSMICG00000028586	GPATCH8	100	95.140	ENSMNEG00000031426	GPATCH8	100	93.542	Macaca_nemestrina
ENSMICG00000028586	GPATCH8	100	95.206	ENSMLEG00000038860	GPATCH8	100	93.609	Mandrillus_leucophaeus
ENSMICG00000028586	GPATCH8	100	89.324	ENSMAUG00000021770	Gpatch8	100	88.329	Mesocricetus_auratus
ENSMICG00000028586	GPATCH8	100	87.963	ENSMOCG00000001658	Gpatch8	100	87.897	Microtus_ochrogaster
ENSMICG00000028586	GPATCH8	100	82.517	ENSMODG00000011442	GPATCH8	100	80.477	Monodelphis_domestica
ENSMICG00000028586	GPATCH8	100	87.359	MGP_CAROLIEiJ_G0017255	Gpatch8	100	88.286	Mus_caroli
ENSMICG00000028586	GPATCH8	100	87.815	ENSMUSG00000034621	Gpatch8	100	88.543	Mus_musculus
ENSMICG00000028586	GPATCH8	100	87.261	MGP_PahariEiJ_G0018385	Gpatch8	100	88.977	Mus_pahari
ENSMICG00000028586	GPATCH8	100	87.261	MGP_SPRETEiJ_G0018098	Gpatch8	100	88.977	Mus_spretus
ENSMICG00000028586	GPATCH8	100	92.947	ENSMPUG00000009274	GPATCH8	100	93.014	Mustela_putorius_furo
ENSMICG00000028586	GPATCH8	93	95.270	ENSMLUG00000013840	GPATCH8	99	95.918	Myotis_lucifugus
ENSMICG00000028586	GPATCH8	100	90.728	ENSNGAG00000021860	Gpatch8	100	90.397	Nannospalax_galili
ENSMICG00000028586	GPATCH8	77	77.560	ENSMEUG00000011799	GPATCH8	100	77.749	Notamacropus_eugenii
ENSMICG00000028586	GPATCH8	100	83.688	ENSOPRG00000008816	GPATCH8	100	83.688	Ochotona_princeps
ENSMICG00000028586	GPATCH8	100	88.549	ENSOCUG00000003291	GPATCH8	100	88.016	Oryctolagus_cuniculus
ENSMICG00000028586	GPATCH8	100	95.848	ENSOGAG00000033643	GPATCH8	100	95.956	Otolemur_garnettii
ENSMICG00000028586	GPATCH8	100	87.193	ENSOARG00000008370	GPATCH8	100	87.923	Ovis_aries
ENSMICG00000028586	GPATCH8	100	95.539	ENSPPAG00000040523	GPATCH8	100	95.539	Pan_paniscus
ENSMICG00000028586	GPATCH8	100	93.613	ENSPPRG00000023310	GPATCH8	100	93.679	Panthera_pardus
ENSMICG00000028586	GPATCH8	100	91.816	ENSPTIG00000020001	GPATCH8	100	91.683	Panthera_tigris_altaica
ENSMICG00000028586	GPATCH8	100	95.606	ENSPTRG00000009278	GPATCH8	100	95.606	Pan_troglodytes
ENSMICG00000028586	GPATCH8	100	94.541	ENSPANG00000021304	GPATCH8	100	93.542	Papio_anubis
ENSMICG00000028586	GPATCH8	100	88.551	ENSPEMG00000008337	Gpatch8	100	88.329	Peromyscus_maniculatus_bairdii
ENSMICG00000028586	GPATCH8	100	80.866	ENSPCIG00000019927	GPATCH8	100	79.204	Phascolarctos_cinereus
ENSMICG00000028586	GPATCH8	100	94.274	ENSPPYG00000008329	GPATCH8	100	93.009	Pongo_abelii
ENSMICG00000028586	GPATCH8	77	100.000	ENSPCAG00000004441	GPATCH8	77	100.000	Procavia_capensis
ENSMICG00000028586	GPATCH8	100	97.678	ENSPCOG00000019209	GPATCH8	99	97.738	Propithecus_coquereli
ENSMICG00000028586	GPATCH8	100	90.293	ENSPVAG00000003155	GPATCH8	100	91.622	Pteropus_vampyrus
ENSMICG00000028586	GPATCH8	100	85.912	ENSRNOG00000021044	Gpatch8	100	87.516	Rattus_norvegicus
ENSMICG00000028586	GPATCH8	100	95.340	ENSRBIG00000033713	GPATCH8	100	95.340	Rhinopithecus_bieti
ENSMICG00000028586	GPATCH8	100	95.340	ENSRROG00000029623	GPATCH8	100	95.340	Rhinopithecus_roxellana
ENSMICG00000028586	GPATCH8	100	95.073	ENSSBOG00000023544	GPATCH8	100	95.073	Saimiri_boliviensis_boliviensis
ENSMICG00000028586	GPATCH8	100	82.353	ENSSHAG00000016140	GPATCH8	100	80.106	Sarcophilus_harrisii
ENSMICG00000028586	GPATCH8	100	88.963	ENSSARG00000007516	GPATCH8	100	88.830	Sorex_araneus
ENSMICG00000028586	GPATCH8	100	91.650	ENSSSCG00000017357	ITGA2B	100	92.103	Sus_scrofa
ENSMICG00000028586	GPATCH8	91	98.758	ENSTBEG00000009486	GPATCH8	91	98.758	Tupaia_belangeri
ENSMICG00000028586	GPATCH8	100	87.972	ENSTTRG00000010527	GPATCH8	100	87.877	Tursiops_truncatus
ENSMICG00000028586	GPATCH8	100	90.105	ENSUMAG00000013891	GPATCH8	100	90.246	Ursus_maritimus
ENSMICG00000028586	GPATCH8	90	91.569	ENSVPAG00000006937	GPATCH8	99	91.056	Vicugna_pacos
ENSMICG00000028586	GPATCH8	100	91.949	ENSVVUG00000017996	GPATCH8	100	93.546	Vulpes_vulpes