EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000028965 (Gene tree)
Gene ID: 105868746
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 218187 bases
Position: chr6:110245532-110463718
Accession: 105868746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000016643	RRM_1	PF00076.22	2.2e-09	1	1
ENSMICP00000030470	RRM_1	PF00076.22	2.2e-09	1	1
ENSMICP00000049604	RRM_1	PF00076.22	2.2e-09	1	1
ENSMICP00000045379	RRM_1	PF00076.22	2.2e-09	1	1
ENSMICP00000033589	RRM_1	PF00076.22	2.2e-09	1	1
ENSMICP00000034117	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000026397	SCAF8-204	7106	XM_012759851	ENSMICP00000030470	1292 (aa)	XP_012615305	UPI00098A5D17
ENSMICT00000041160	SCAF8-205	4098	-	ENSMICP00000034117	1365 (aa)	-	UPI000C2EAA14
ENSMICT00000045483	SCAF8-206	3801	-	ENSMICP00000033589	1266 (aa)	-	UPI000C2EAACD
ENSMICT00000058250	SCAF8-202	8547	XM_012759846	ENSMICP00000049604	1292 (aa)	XP_012615300	UPI00098A5D17
ENSMICT00000039692	SCAF8-201	4551	XM_012759849	ENSMICP00000016643	1292 (aa)	XP_012615303	UPI00098A5D17
ENSMICT00000061949	SCAF8-203	8484	XM_012759852	ENSMICP00000045379	1271 (aa)	XP_012615306	UPI00098BA953

Gene Model

Click here to download ENSMICG00000028965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000028965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000028965	SCAF8	100	96.442	ENSG00000213079	SCAF8	100	96.384	Homo_sapiens
ENSMICG00000028965	SCAF8	88	68.075	ENSAPOG00000015527	SCAF8	77	67.723	Acanthochromis_polyacanthus
ENSMICG00000028965	SCAF8	100	95.437	ENSAMEG00000007583	SCAF8	97	95.592	Ailuropoda_melanoleuca
ENSMICG00000028965	SCAF8	88	68.075	ENSAOCG00000002421	SCAF8	76	67.723	Amphiprion_ocellaris
ENSMICG00000028965	SCAF8	89	65.176	ENSATEG00000006959	SCAF8	97	64.547	Anabas_testudineus
ENSMICG00000028965	SCAF8	100	78.816	ENSAPLG00000005765	SCAF8	100	78.972	Anas_platyrhynchos
ENSMICG00000028965	SCAF8	99	74.764	ENSACAG00000005282	SCAF8	99	74.823	Anolis_carolinensis
ENSMICG00000028965	SCAF8	100	96.365	ENSANAG00000036184	SCAF8	100	96.305	Aotus_nancymaae
ENSMICG00000028965	SCAF8	88	67.882	ENSACLG00000018828	SCAF8	80	56.122	Astatotilapia_calliptera
ENSMICG00000028965	SCAF8	100	94.261	ENSBTAG00000031917	SCAF8	100	94.418	Bos_taurus
ENSMICG00000028965	SCAF8	100	96.210	ENSCJAG00000012631	SCAF8	100	94.217	Callithrix_jacchus
ENSMICG00000028965	SCAF8	99	95.099	ENSCAFG00000000570	SCAF8	100	95.351	Canis_familiaris
ENSMICG00000028965	SCAF8	99	95.095	ENSCAFG00020015048	SCAF8	99	95.189	Canis_lupus_dingo
ENSMICG00000028965	SCAF8	100	94.182	ENSCHIG00000025041	SCAF8	100	94.340	Capra_hircus
ENSMICG00000028965	SCAF8	99	95.479	ENSTSYG00000010991	SCAF8	98	95.635	Carlito_syrichta
ENSMICG00000028965	SCAF8	65	98.276	ENSCAPG00000003300	SCAF8	88	98.246	Cavia_aperea
ENSMICG00000028965	SCAF8	99	85.872	ENSCPOG00000022216	-	99	85.478	Cavia_porcellus
ENSMICG00000028965	SCAF8	100	96.056	ENSCCAG00000024952	SCAF8	100	96.056	Cebus_capucinus
ENSMICG00000028965	SCAF8	100	96.597	ENSCATG00000035361	SCAF8	100	96.541	Cercocebus_atys
ENSMICG00000028965	SCAF8	100	93.323	ENSCLAG00000004910	SCAF8	100	93.983	Chinchilla_lanigera
ENSMICG00000028965	SCAF8	100	96.752	ENSCSAG00000013430	SCAF8	100	96.752	Chlorocebus_sabaeus
ENSMICG00000028965	SCAF8	100	96.442	ENSCANG00000039499	SCAF8	99	96.442	Colobus_angolensis_palliatus
ENSMICG00000028965	SCAF8	100	90.966	ENSCGRG00001020167	Scaf8	100	91.123	Cricetulus_griseus_chok1gshd
ENSMICG00000028965	SCAF8	99	90.823	ENSCGRG00000004120	Scaf8	99	91.053	Cricetulus_griseus_crigri
ENSMICG00000028965	SCAF8	88	65.448	ENSCSEG00000000043	-	78	66.627	Cynoglossus_semilaevis
ENSMICG00000028965	SCAF8	82	67.192	ENSCVAG00000000925	SCAF8	77	66.667	Cyprinodon_variegatus
ENSMICG00000028965	SCAF8	96	89.180	ENSDNOG00000025271	SCAF8	100	92.787	Dasypus_novemcinctus
ENSMICG00000028965	SCAF8	100	92.120	ENSDORG00000006391	Scaf8	100	93.297	Dipodomys_ordii
ENSMICG00000028965	SCAF8	100	95.592	ENSEASG00005018879	SCAF8	100	95.746	Equus_asinus_asinus
ENSMICG00000028965	SCAF8	100	95.669	ENSECAG00000005540	SCAF8	100	95.824	Equus_caballus
ENSMICG00000028965	SCAF8	88	65.349	ENSELUG00000002779	SCAF8	75	65.000	Esox_lucius
ENSMICG00000028965	SCAF8	100	95.676	ENSFCAG00000023424	SCAF8	100	95.833	Felis_catus
ENSMICG00000028965	SCAF8	100	77.136	ENSFALG00000012433	SCAF8	100	78.694	Ficedula_albicollis
ENSMICG00000028965	SCAF8	99	94.299	ENSFDAG00000010335	SCAF8	99	94.458	Fukomys_damarensis
ENSMICG00000028965	SCAF8	92	54.971	ENSFHEG00000008284	SCAF8	77	56.030	Fundulus_heteroclitus
ENSMICG00000028965	SCAF8	66	62.690	ENSGMOG00000018812	SCAF8	73	64.561	Gadus_morhua
ENSMICG00000028965	SCAF8	100	78.845	ENSGALG00000013635	SCAF8	99	79.222	Gallus_gallus
ENSMICG00000028965	SCAF8	89	65.292	ENSGAFG00000018033	SCAF8	78	62.400	Gambusia_affinis
ENSMICG00000028965	SCAF8	93	53.635	ENSGACG00000006909	SCAF8	100	54.604	Gasterosteus_aculeatus
ENSMICG00000028965	SCAF8	63	72.940	ENSGAGG00000017820	-	88	73.342	Gopherus_agassizii
ENSMICG00000028965	SCAF8	100	96.384	ENSGGOG00000008645	SCAF8	100	96.384	Gorilla_gorilla
ENSMICG00000028965	SCAF8	88	67.765	ENSHBUG00000019537	SCAF8	80	56.039	Haplochromis_burtoni
ENSMICG00000028965	SCAF8	100	94.030	ENSHGLG00000003619	SCAF8	100	94.187	Heterocephalus_glaber_female
ENSMICG00000028965	SCAF8	100	93.401	ENSHGLG00100004708	SCAF8	100	94.141	Heterocephalus_glaber_male
ENSMICG00000028965	SCAF8	99	95.099	ENSSTOG00000026043	SCAF8	100	95.351	Ictidomys_tridecemlineatus
ENSMICG00000028965	SCAF8	100	92.302	ENSJJAG00000020480	Scaf8	100	92.380	Jaculus_jaculus
ENSMICG00000028965	SCAF8	88	67.373	ENSKMAG00000012767	SCAF8	78	67.020	Kryptolebias_marmoratus
ENSMICG00000028965	SCAF8	62	76.667	ENSLBEG00000012484	-	60	76.125	Labrus_bergylta
ENSMICG00000028965	SCAF8	86	77.623	ENSLACG00000001394	SCAF8	99	76.051	Latimeria_chalumnae
ENSMICG00000028965	SCAF8	100	61.202	ENSLOCG00000016856	SCAF8	100	60.343	Lepisosteus_oculatus
ENSMICG00000028965	SCAF8	100	93.014	ENSLAFG00000000022	SCAF8	100	93.721	Loxodonta_africana
ENSMICG00000028965	SCAF8	100	96.752	ENSMFAG00000032738	SCAF8	100	96.698	Macaca_fascicularis
ENSMICG00000028965	SCAF8	100	96.752	ENSMMUG00000015163	SCAF8	100	96.698	Macaca_mulatta
ENSMICG00000028965	SCAF8	100	96.752	ENSMNEG00000043466	SCAF8	100	96.698	Macaca_nemestrina
ENSMICG00000028965	SCAF8	99	96.571	ENSMLEG00000034845	SCAF8	100	96.571	Mandrillus_leucophaeus
ENSMICG00000028965	SCAF8	85	64.134	ENSMAMG00000009457	SCAF8	76	63.433	Mastacembelus_armatus
ENSMICG00000028965	SCAF8	88	67.765	ENSMZEG00005005698	SCAF8	80	56.039	Maylandia_zebra
ENSMICG00000028965	SCAF8	99	79.487	ENSMGAG00000012762	SCAF8	100	79.409	Meleagris_gallopavo
ENSMICG00000028965	SCAF8	99	90.340	ENSMAUG00000009513	Scaf8	100	90.499	Mesocricetus_auratus
ENSMICG00000028965	SCAF8	100	91.438	ENSMOCG00000014950	Scaf8	100	91.595	Microtus_ochrogaster
ENSMICG00000028965	SCAF8	83	64.975	ENSMMOG00000002216	SCAF8	78	52.548	Mola_mola
ENSMICG00000028965	SCAF8	99	86.019	ENSMODG00000008301	SCAF8	100	86.299	Monodelphis_domestica
ENSMICG00000028965	SCAF8	93	55.916	ENSMALG00000011584	SCAF8	78	55.897	Monopterus_albus
ENSMICG00000028965	SCAF8	100	90.645	MGP_CAROLIEiJ_G0021016	Scaf8	100	90.802	Mus_caroli
ENSMICG00000028965	SCAF8	100	90.881	ENSMUSG00000046201	Scaf8	100	91.038	Mus_musculus
ENSMICG00000028965	SCAF8	100	91.274	MGP_PahariEiJ_G0023334	Scaf8	100	91.431	Mus_pahari
ENSMICG00000028965	SCAF8	100	94.973	ENSMPUG00000001974	SCAF8	100	95.128	Mustela_putorius_furo
ENSMICG00000028965	SCAF8	100	92.610	ENSMLUG00000029190	SCAF8	100	92.767	Myotis_lucifugus
ENSMICG00000028965	SCAF8	100	92.459	ENSNGAG00000012332	Scaf8	100	92.616	Nannospalax_galili
ENSMICG00000028965	SCAF8	100	52.733	ENSNBRG00000009067	SCAF8	100	52.668	Neolamprologus_brichardi
ENSMICG00000028965	SCAF8	100	95.896	ENSNLEG00000015509	SCAF8	99	96.054	Nomascus_leucogenys
ENSMICG00000028965	SCAF8	70	94.495	ENSOPRG00000018413	-	77	94.286	Ochotona_princeps
ENSMICG00000028965	SCAF8	100	93.799	ENSODEG00000007296	SCAF8	100	93.956	Octodon_degus
ENSMICG00000028965	SCAF8	100	54.851	ENSONIG00000008119	SCAF8	99	54.873	Oreochromis_niloticus
ENSMICG00000028965	SCAF8	99	95.494	ENSOCUG00000026063	SCAF8	100	95.745	Oryctolagus_cuniculus
ENSMICG00000028965	SCAF8	93	55.793	ENSORLG00000017358	SCAF8	78	66.588	Oryzias_latipes
ENSMICG00000028965	SCAF8	93	55.957	ENSORLG00020002214	SCAF8	78	66.706	Oryzias_latipes_hni
ENSMICG00000028965	SCAF8	93	55.793	ENSORLG00015015779	SCAF8	78	66.824	Oryzias_latipes_hsok
ENSMICG00000028965	SCAF8	88	66.941	ENSOMEG00000015471	SCAF8	77	66.941	Oryzias_melastigma
ENSMICG00000028965	SCAF8	100	96.133	ENSOGAG00000034223	SCAF8	97	96.133	Otolemur_garnettii
ENSMICG00000028965	SCAF8	99	93.903	ENSOARG00000004159	SCAF8	100	94.062	Ovis_aries
ENSMICG00000028965	SCAF8	100	96.226	ENSPPAG00000039826	SCAF8	100	96.226	Pan_paniscus
ENSMICG00000028965	SCAF8	100	95.755	ENSPPRG00000023175	SCAF8	100	95.912	Panthera_pardus
ENSMICG00000028965	SCAF8	99	95.649	ENSPTIG00000014836	SCAF8	100	95.807	Panthera_tigris_altaica
ENSMICG00000028965	SCAF8	100	96.442	ENSPTRG00000018727	SCAF8	100	96.384	Pan_troglodytes
ENSMICG00000028965	SCAF8	100	96.597	ENSPANG00000017489	SCAF8	100	94.874	Papio_anubis
ENSMICG00000028965	SCAF8	100	56.928	ENSPKIG00000021212	SCAF8	100	57.175	Paramormyrops_kingsleyae
ENSMICG00000028965	SCAF8	89	73.897	ENSPSIG00000008614	SCAF8	95	77.099	Pelodiscus_sinensis
ENSMICG00000028965	SCAF8	99	91.370	ENSPEMG00000010531	Scaf8	100	91.528	Peromyscus_maniculatus_bairdii
ENSMICG00000028965	SCAF8	100	87.127	ENSPCIG00000001141	SCAF8	100	87.284	Phascolarctos_cinereus
ENSMICG00000028965	SCAF8	89	66.055	ENSPFOG00000004176	SCAF8	100	55.497	Poecilia_formosa
ENSMICG00000028965	SCAF8	89	65.940	ENSPLAG00000021432	SCAF8	77	65.596	Poecilia_latipinna
ENSMICG00000028965	SCAF8	89	66.055	ENSPMEG00000007591	SCAF8	84	64.952	Poecilia_mexicana
ENSMICG00000028965	SCAF8	89	65.826	ENSPREG00000000652	SCAF8	77	65.367	Poecilia_reticulata
ENSMICG00000028965	SCAF8	100	94.741	ENSPPYG00000017121	SCAF8	100	94.984	Pongo_abelii
ENSMICG00000028965	SCAF8	85	97.320	ENSPCAG00000013044	SCAF8	90	97.320	Procavia_capensis
ENSMICG00000028965	SCAF8	100	97.755	ENSPCOG00000002067	SCAF8	99	97.700	Propithecus_coquereli
ENSMICG00000028965	SCAF8	99	91.540	ENSPVAG00000005582	SCAF8	100	92.817	Pteropus_vampyrus
ENSMICG00000028965	SCAF8	88	67.882	ENSPNYG00000007277	SCAF8	80	56.122	Pundamilia_nyererei
ENSMICG00000028965	SCAF8	86	68.382	ENSPNAG00000024740	SCAF8	82	68.750	Pygocentrus_nattereri
ENSMICG00000028965	SCAF8	100	90.723	ENSRNOG00000016919	Scaf8	100	90.881	Rattus_norvegicus
ENSMICG00000028965	SCAF8	100	96.462	ENSRBIG00000035769	SCAF8	100	96.462	Rhinopithecus_bieti
ENSMICG00000028965	SCAF8	100	96.384	ENSRROG00000013580	SCAF8	100	96.384	Rhinopithecus_roxellana
ENSMICG00000028965	SCAF8	100	95.833	ENSSBOG00000027023	SCAF8	100	95.991	Saimiri_boliviensis_boliviensis
ENSMICG00000028965	SCAF8	100	86.275	ENSSHAG00000009915	SCAF8	100	86.588	Sarcophilus_harrisii
ENSMICG00000028965	SCAF8	100	54.958	ENSSFOG00015009481	SCAF8	93	70.976	Scleropages_formosus
ENSMICG00000028965	SCAF8	88	66.901	ENSSMAG00000008275	SCAF8	77	66.549	Scophthalmus_maximus
ENSMICG00000028965	SCAF8	100	77.225	ENSSPUG00000015219	SCAF8	100	77.526	Sphenodon_punctatus
ENSMICG00000028965	SCAF8	100	95.047	ENSSSCG00000004070	SCAF8	100	95.204	Sus_scrofa
ENSMICG00000028965	SCAF8	99	79.811	ENSTGUG00000011151	SCAF8	100	80.204	Taeniopygia_guttata
ENSMICG00000028965	SCAF8	85	68.148	ENSTRUG00000009243	SCAF8	78	68.025	Takifugu_rubripes
ENSMICG00000028965	SCAF8	93	54.389	ENSTNIG00000016885	SCAF8	99	54.553	Tetraodon_nigroviridis
ENSMICG00000028965	SCAF8	99	94.295	ENSTTRG00000014538	SCAF8	100	94.453	Tursiops_truncatus
ENSMICG00000028965	SCAF8	100	95.362	ENSUAMG00000024736	SCAF8	99	95.483	Ursus_americanus
ENSMICG00000028965	SCAF8	98	95.349	ENSUMAG00000013404	SCAF8	100	95.509	Ursus_maritimus
ENSMICG00000028965	SCAF8	67	84.302	ENSVPAG00000012465	SCAF8	99	84.065	Vicugna_pacos
ENSMICG00000028965	SCAF8	99	95.174	ENSVVUG00000007532	SCAF8	100	95.426	Vulpes_vulpes
ENSMICG00000028965	SCAF8	100	61.293	ENSXETG00000013132	scaf8	100	61.449	Xenopus_tropicalis
ENSMICG00000028965	SCAF8	89	65.826	ENSXMAG00000019192	SCAF8	78	65.596	Xiphophorus_maculatus