EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000028979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4501 bases
Position: chr3:50093501-50098001
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000050223	Brix	PF04427.18	6.8e-24	1	1
ENSMICP00000046933	Brix	PF04427.18	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000065205	-	705	-	ENSMICP00000050223	234 (aa)	-	UPI000C2EA1D3
ENSMICT00000059139	-	225	-	ENSMICP00000044230	74 (aa)	-	UPI000C2E9F49
ENSMICT00000040304	-	465	-	ENSMICP00000020739	154 (aa)	-	UPI000C2ED2FF
ENSMICT00000060499	-	852	-	ENSMICP00000046933	283 (aa)	-	UPI000C2EC179

Gene Model

Click here to download ENSMICG00000028979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000028979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000028979	-	98	73.826	ENSMICG00000038169	-	99	73.267
ENSMICG00000028979	-	99	81.848	ENSMICG00000032086	-	99	81.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000028979	-	99	78.548	ENSG00000197498	RPF2	99	78.548	Homo_sapiens
ENSMICG00000028979	-	99	63.366	ENSAPOG00000005714	rpf2	98	63.366	Acanthochromis_polyacanthus
ENSMICG00000028979	-	99	77.888	ENSAMEG00000015753	RPF2	99	77.888	Ailuropoda_melanoleuca
ENSMICG00000028979	-	51	58.385	ENSACIG00000006659	rpf2	92	60.000	Amphilophus_citrinellus
ENSMICG00000028979	-	99	63.036	ENSAOCG00000005173	rpf2	96	63.758	Amphiprion_ocellaris
ENSMICG00000028979	-	99	63.036	ENSAPEG00000004003	rpf2	96	63.758	Amphiprion_percula
ENSMICG00000028979	-	99	61.967	ENSATEG00000012818	rpf2	99	61.967	Anabas_testudineus
ENSMICG00000028979	-	94	68.050	ENSAPLG00000008812	RPF2	100	70.803	Anas_platyrhynchos
ENSMICG00000028979	-	99	69.205	ENSACAG00000011270	RPF2	97	69.205	Anolis_carolinensis
ENSMICG00000028979	-	99	60.811	ENSANAG00000021067	-	97	60.473	Aotus_nancymaae
ENSMICG00000028979	-	99	64.685	ENSANAG00000033736	-	99	62.914	Aotus_nancymaae
ENSMICG00000028979	-	99	75.578	ENSANAG00000026549	-	99	75.578	Aotus_nancymaae
ENSMICG00000028979	-	99	60.927	ENSANAG00000025459	-	95	60.265	Aotus_nancymaae
ENSMICG00000028979	-	99	72.185	ENSANAG00000034834	-	99	72.185	Aotus_nancymaae
ENSMICG00000028979	-	97	63.851	ENSAMXG00000035201	rpf2	96	63.851	Astyanax_mexicanus
ENSMICG00000028979	-	99	78.548	ENSBTAG00000016584	RPF2	99	78.548	Bos_taurus
ENSMICG00000028979	-	95	36.860	WBGene00021830	Y54E10A.10	98	36.860	Caenorhabditis_elegans
ENSMICG00000028979	-	99	79.208	ENSCJAG00000038330	RPF2	99	79.208	Callithrix_jacchus
ENSMICG00000028979	-	99	78.878	ENSCAFG00000003918	RPF2	99	78.878	Canis_familiaris
ENSMICG00000028979	-	99	73.597	ENSCHIG00000022499	RPF2	99	73.597	Capra_hircus
ENSMICG00000028979	-	99	76.238	ENSTSYG00000013924	RPF2	99	76.238	Carlito_syrichta
ENSMICG00000028979	-	99	60.535	ENSCAPG00000014257	RPF2	98	59.532	Cavia_aperea
ENSMICG00000028979	-	99	78.548	ENSCPOG00000006797	RPF2	99	78.548	Cavia_porcellus
ENSMICG00000028979	-	95	60.690	ENSCCAG00000028906	-	98	62.128	Cebus_capucinus
ENSMICG00000028979	-	99	77.558	ENSCCAG00000030365	-	99	77.558	Cebus_capucinus
ENSMICG00000028979	-	99	54.545	ENSCCAG00000028553	-	97	61.279	Cebus_capucinus
ENSMICG00000028979	-	99	78.878	ENSCCAG00000030864	-	99	78.878	Cebus_capucinus
ENSMICG00000028979	-	93	68.803	ENSCATG00000029725	-	98	81.395	Cercocebus_atys
ENSMICG00000028979	-	99	60.396	ENSCATG00000034352	-	98	60.396	Cercocebus_atys
ENSMICG00000028979	-	96	62.500	ENSCLAG00000010874	-	99	61.356	Chinchilla_lanigera
ENSMICG00000028979	-	99	78.548	ENSCLAG00000010393	-	99	78.548	Chinchilla_lanigera
ENSMICG00000028979	-	88	52.941	ENSCLAG00000013252	-	99	53.731	Chinchilla_lanigera
ENSMICG00000028979	-	99	73.684	ENSCHOG00000005865	RPF2	99	73.684	Choloepus_hoffmanni
ENSMICG00000028979	-	98	72.819	ENSCPBG00000006504	RPF2	97	72.819	Chrysemys_picta_bellii
ENSMICG00000028979	-	93	50.175	ENSCING00000008090	-	96	49.495	Ciona_intestinalis
ENSMICG00000028979	-	94	49.653	ENSCSAVG00000010672	-	97	49.653	Ciona_savignyi
ENSMICG00000028979	-	99	78.548	ENSCANG00000030665	RPF2	99	78.548	Colobus_angolensis_palliatus
ENSMICG00000028979	-	99	76.898	ENSCGRG00001007331	-	99	76.898	Cricetulus_griseus_chok1gshd
ENSMICG00000028979	-	99	65.734	ENSCGRG00001005262	-	97	65.734	Cricetulus_griseus_chok1gshd
ENSMICG00000028979	-	99	76.490	ENSCGRG00000006083	Rpf2	98	76.490	Cricetulus_griseus_crigri
ENSMICG00000028979	-	98	61.745	ENSCSEG00000015725	rpf2	98	61.745	Cynoglossus_semilaevis
ENSMICG00000028979	-	99	63.366	ENSCVAG00000001072	rpf2	99	63.366	Cyprinodon_variegatus
ENSMICG00000028979	-	98	59.603	ENSDARG00000043960	rpf2	97	59.603	Danio_rerio
ENSMICG00000028979	-	63	69.154	ENSDNOG00000039270	RPF2	97	69.154	Dasypus_novemcinctus
ENSMICG00000028979	-	67	80.645	ENSDORG00000026915	Rpf2	100	80.645	Dipodomys_ordii
ENSMICG00000028979	-	97	40.404	FBgn0038585	Non3	93	40.803	Drosophila_melanogaster
ENSMICG00000028979	-	96	47.119	ENSEBUG00000003640	rpf2	89	47.119	Eptatretus_burgeri
ENSMICG00000028979	-	98	76.174	ENSEASG00005006927	-	99	75.908	Equus_asinus_asinus
ENSMICG00000028979	-	98	80.537	ENSECAG00000017121	RPF2	99	80.198	Equus_caballus
ENSMICG00000028979	-	77	94.286	ENSEEUG00000006169	RPF2	79	94.286	Erinaceus_europaeus
ENSMICG00000028979	-	94	63.194	ENSELUG00000018518	rpf2	94	63.194	Esox_lucius
ENSMICG00000028979	-	99	78.548	ENSFCAG00000001527	RPF2	99	78.548	Felis_catus
ENSMICG00000028979	-	97	72.973	ENSFALG00000010816	RPF2	96	72.973	Ficedula_albicollis
ENSMICG00000028979	-	99	77.558	ENSFDAG00000005811	-	99	77.558	Fukomys_damarensis
ENSMICG00000028979	-	93	59.167	ENSFDAG00000016721	-	100	61.993	Fukomys_damarensis
ENSMICG00000028979	-	99	63.366	ENSFHEG00000011243	rpf2	98	63.366	Fundulus_heteroclitus
ENSMICG00000028979	-	95	52.414	ENSGMOG00000002521	rpf2	97	52.414	Gadus_morhua
ENSMICG00000028979	-	97	72.297	ENSGALG00000037087	RPF2	96	72.297	Gallus_gallus
ENSMICG00000028979	-	99	64.026	ENSGAFG00000009537	rpf2	99	64.026	Gambusia_affinis
ENSMICG00000028979	-	98	61.409	ENSGACG00000006507	rpf2	96	61.409	Gasterosteus_aculeatus
ENSMICG00000028979	-	98	69.128	ENSGAGG00000016221	RPF2	97	69.128	Gopherus_agassizii
ENSMICG00000028979	-	93	70.979	ENSGGOG00000024187	-	99	70.979	Gorilla_gorilla
ENSMICG00000028979	-	99	67.719	ENSGGOG00000001469	RPF2	98	67.719	Gorilla_gorilla
ENSMICG00000028979	-	99	63.366	ENSHBUG00000021805	rpf2	98	63.366	Haplochromis_burtoni
ENSMICG00000028979	-	99	77.228	ENSHGLG00000001322	RPF2	99	77.228	Heterocephalus_glaber_female
ENSMICG00000028979	-	94	70.732	ENSHGLG00000012697	-	99	70.732	Heterocephalus_glaber_female
ENSMICG00000028979	-	99	71.959	ENSHGLG00000012500	-	80	71.959	Heterocephalus_glaber_female
ENSMICG00000028979	-	88	62.738	ENSHGLG00100009310	-	99	63.878	Heterocephalus_glaber_male
ENSMICG00000028979	-	99	71.622	ENSHGLG00100012473	-	97	71.864	Heterocephalus_glaber_male
ENSMICG00000028979	-	94	70.732	ENSHGLG00100000462	-	99	70.732	Heterocephalus_glaber_male
ENSMICG00000028979	-	99	77.228	ENSHGLG00100012131	RPF2	99	77.228	Heterocephalus_glaber_male
ENSMICG00000028979	-	93	62.238	ENSHGLG00100002981	-	99	62.238	Heterocephalus_glaber_male
ENSMICG00000028979	-	99	61.386	ENSHCOG00000000225	rpf2	99	61.386	Hippocampus_comes
ENSMICG00000028979	-	95	55.479	ENSIPUG00000016288	rpf2	94	55.137	Ictalurus_punctatus
ENSMICG00000028979	-	99	70.213	ENSSTOG00000013114	RPF2	98	70.213	Ictidomys_tridecemlineatus
ENSMICG00000028979	-	99	69.737	ENSJJAG00000009092	Rpf2	100	70.775	Jaculus_jaculus
ENSMICG00000028979	-	99	62.623	ENSKMAG00000014609	rpf2	99	62.623	Kryptolebias_marmoratus
ENSMICG00000028979	-	98	62.081	ENSLBEG00000011907	rpf2	96	54.698	Labrus_bergylta
ENSMICG00000028979	-	97	64.430	ENSLACG00000003942	RPF2	96	64.430	Latimeria_chalumnae
ENSMICG00000028979	-	94	64.605	ENSLOCG00000016992	rpf2	94	64.605	Lepisosteus_oculatus
ENSMICG00000028979	-	99	78.878	ENSLAFG00000018219	RPF2	98	78.878	Loxodonta_africana
ENSMICG00000028979	-	93	68.240	ENSMFAG00000036119	-	99	69.349	Macaca_fascicularis
ENSMICG00000028979	-	99	78.878	ENSMFAG00000000417	RPF2	99	78.878	Macaca_fascicularis
ENSMICG00000028979	-	99	68.581	ENSMMUG00000042376	-	99	68.581	Macaca_mulatta
ENSMICG00000028979	-	99	78.878	ENSMMUG00000021532	RPF2	99	78.878	Macaca_mulatta
ENSMICG00000028979	-	99	68.421	ENSMNEG00000031683	RPF2	98	68.421	Macaca_nemestrina
ENSMICG00000028979	-	99	70.307	ENSMLEG00000042472	-	99	70.307	Mandrillus_leucophaeus
ENSMICG00000028979	-	99	62.706	ENSMAMG00000004267	rpf2	98	62.706	Mastacembelus_armatus
ENSMICG00000028979	-	99	63.366	ENSMZEG00005015632	rpf2	98	63.366	Maylandia_zebra
ENSMICG00000028979	-	97	71.622	ENSMGAG00000013429	RPF2	96	71.622	Meleagris_gallopavo
ENSMICG00000028979	-	93	52.752	ENSMAUG00000005049	Rpf2	100	54.348	Mesocricetus_auratus
ENSMICG00000028979	-	98	76.333	ENSMOCG00000005634	Rpf2	97	76.333	Microtus_ochrogaster
ENSMICG00000028979	-	96	54.237	ENSMMOG00000014844	rpf2	97	54.237	Mola_mola
ENSMICG00000028979	-	96	74.576	ENSMODG00000017919	RPF2	97	74.576	Monodelphis_domestica
ENSMICG00000028979	-	98	62.416	ENSMALG00000019046	rpf2	96	62.416	Monopterus_albus
ENSMICG00000028979	-	99	76.898	MGP_CAROLIEiJ_G0015254	Rpf2	100	88.462	Mus_caroli
ENSMICG00000028979	-	99	76.238	ENSMUSG00000038510	Rpf2	99	76.238	Mus_musculus
ENSMICG00000028979	-	99	76.898	MGP_PahariEiJ_G0030671	Rpf2	98	76.898	Mus_pahari
ENSMICG00000028979	-	99	76.238	MGP_SPRETEiJ_G0016063	Rpf2	98	76.238	Mus_spretus
ENSMICG00000028979	-	99	78.878	ENSMPUG00000010183	RPF2	86	78.878	Mustela_putorius_furo
ENSMICG00000028979	-	81	76.096	ENSMLUG00000005676	RPF2	98	76.096	Myotis_lucifugus
ENSMICG00000028979	-	99	77.558	ENSNGAG00000009701	Rpf2	99	77.558	Nannospalax_galili
ENSMICG00000028979	-	99	63.036	ENSNBRG00000011087	rpf2	98	63.036	Neolamprologus_brichardi
ENSMICG00000028979	-	96	66.221	ENSNLEG00000033597	-	95	66.221	Nomascus_leucogenys
ENSMICG00000028979	-	91	73.729	ENSNLEG00000011848	-	97	73.729	Nomascus_leucogenys
ENSMICG00000028979	-	99	78.548	ENSNLEG00000027819	RPF2	99	78.548	Nomascus_leucogenys
ENSMICG00000028979	-	96	59.184	ENSMEUG00000006421	RPF2	99	59.184	Notamacropus_eugenii
ENSMICG00000028979	-	98	63.880	ENSODEG00000002442	-	97	63.880	Octodon_degus
ENSMICG00000028979	-	90	61.594	ENSODEG00000006939	-	99	61.594	Octodon_degus
ENSMICG00000028979	-	96	77.966	ENSODEG00000013529	-	96	77.966	Octodon_degus
ENSMICG00000028979	-	89	65.314	ENSODEG00000003531	-	99	65.314	Octodon_degus
ENSMICG00000028979	-	99	74.917	ENSODEG00000019144	-	99	74.917	Octodon_degus
ENSMICG00000028979	-	99	70.000	ENSODEG00000006584	-	99	70.000	Octodon_degus
ENSMICG00000028979	-	99	63.036	ENSONIG00000011383	rpf2	98	63.036	Oreochromis_niloticus
ENSMICG00000028979	-	99	78.218	ENSOCUG00000016028	RPF2	99	78.218	Oryctolagus_cuniculus
ENSMICG00000028979	-	99	60.396	ENSORLG00000015183	rpf2	98	60.396	Oryzias_latipes
ENSMICG00000028979	-	99	60.066	ENSORLG00020008756	rpf2	98	57.049	Oryzias_latipes_hni
ENSMICG00000028979	-	99	60.396	ENSORLG00015003841	RPF2	98	60.396	Oryzias_latipes_hsok
ENSMICG00000028979	-	99	62.376	ENSOMEG00000011508	rpf2	98	62.376	Oryzias_melastigma
ENSMICG00000028979	-	99	78.548	ENSOGAG00000007438	RPF2	99	78.548	Otolemur_garnettii
ENSMICG00000028979	-	99	78.548	ENSOARG00000009886	-	99	78.548	Ovis_aries
ENSMICG00000028979	-	99	78.548	ENSOARG00000015548	-	99	78.548	Ovis_aries
ENSMICG00000028979	-	99	78.548	ENSPPAG00000035622	RPF2	99	78.548	Pan_paniscus
ENSMICG00000028979	-	94	70.124	ENSPPAG00000032089	-	99	70.714	Pan_paniscus
ENSMICG00000028979	-	93	66.197	ENSPPRG00000008363	-	93	66.197	Panthera_pardus
ENSMICG00000028979	-	99	78.878	ENSPPRG00000000320	-	99	78.878	Panthera_pardus
ENSMICG00000028979	-	99	78.878	ENSPTIG00000002060	RPF2	99	78.878	Panthera_tigris_altaica
ENSMICG00000028979	-	99	78.548	ENSPTRG00000018503	RPF2	99	78.548	Pan_troglodytes
ENSMICG00000028979	-	99	78.878	ENSPANG00000018834	RPF2	99	78.878	Papio_anubis
ENSMICG00000028979	-	95	63.918	ENSPKIG00000019506	rpf2	95	63.918	Paramormyrops_kingsleyae
ENSMICG00000028979	-	98	72.148	ENSPSIG00000014887	RPF2	97	72.148	Pelodiscus_sinensis
ENSMICG00000028979	-	93	69.014	ENSPEMG00000011413	Rpf2	100	69.014	Peromyscus_maniculatus_bairdii
ENSMICG00000028979	-	98	74.161	ENSPCIG00000028172	RPF2	97	73.597	Phascolarctos_cinereus
ENSMICG00000028979	-	99	64.686	ENSPFOG00000003396	rpf2	99	64.686	Poecilia_formosa
ENSMICG00000028979	-	99	64.356	ENSPLAG00000001226	rpf2	99	64.356	Poecilia_latipinna
ENSMICG00000028979	-	99	64.686	ENSPMEG00000007781	rpf2	99	64.686	Poecilia_mexicana
ENSMICG00000028979	-	99	63.696	ENSPREG00000020525	rpf2	99	63.696	Poecilia_reticulata
ENSMICG00000028979	-	99	78.878	ENSPPYG00000016925	RPF2	99	78.878	Pongo_abelii
ENSMICG00000028979	-	74	70.256	ENSPCAG00000002562	RPF2	79	70.256	Procavia_capensis
ENSMICG00000028979	-	98	72.028	ENSPCOG00000012785	RPF2	98	73.077	Propithecus_coquereli
ENSMICG00000028979	-	79	77.642	ENSPVAG00000003446	RPF2	82	76.892	Pteropus_vampyrus
ENSMICG00000028979	-	97	61.824	ENSPNAG00000000082	rpf2	96	61.824	Pygocentrus_nattereri
ENSMICG00000028979	-	99	76.898	ENSRNOG00000000587	Rpf2	99	76.898	Rattus_norvegicus
ENSMICG00000028979	-	97	77.104	ENSRBIG00000038389	RPF2	99	75.908	Rhinopithecus_bieti
ENSMICG00000028979	-	99	79.139	ENSRROG00000036457	RPF2	99	79.139	Rhinopithecus_roxellana
ENSMICG00000028979	-	96	71.951	ENSRROG00000036685	-	94	71.951	Rhinopithecus_roxellana
ENSMICG00000028979	-	94	68.699	ENSRROG00000039510	-	99	69.963	Rhinopithecus_roxellana
ENSMICG00000028979	-	82	66.929	ENSRROG00000028992	-	85	66.929	Rhinopithecus_roxellana
ENSMICG00000028979	-	92	40.476	YKR081C	-	85	40.476	Saccharomyces_cerevisiae
ENSMICG00000028979	-	95	62.332	ENSSBOG00000029182	-	93	62.332	Saimiri_boliviensis_boliviensis
ENSMICG00000028979	-	95	58.848	ENSSBOG00000030264	-	89	58.848	Saimiri_boliviensis_boliviensis
ENSMICG00000028979	-	99	55.298	ENSSBOG00000034420	-	98	52.649	Saimiri_boliviensis_boliviensis
ENSMICG00000028979	-	99	58.000	ENSSBOG00000022486	-	92	67.416	Saimiri_boliviensis_boliviensis
ENSMICG00000028979	-	97	60.269	ENSSBOG00000025434	-	99	57.576	Saimiri_boliviensis_boliviensis
ENSMICG00000028979	-	99	74.257	ENSSHAG00000002212	RPF2	98	74.257	Sarcophilus_harrisii
ENSMICG00000028979	-	99	60.726	ENSSFOG00015020916	rpf2	99	60.726	Scleropages_formosus
ENSMICG00000028979	-	99	61.386	ENSSMAG00000017499	rpf2	93	63.889	Scophthalmus_maximus
ENSMICG00000028979	-	99	57.655	ENSSDUG00000010383	rpf2	97	57.655	Seriola_dumerili
ENSMICG00000028979	-	99	61.716	ENSSLDG00000022111	rpf2	98	61.716	Seriola_lalandi_dorsalis
ENSMICG00000028979	-	99	58.140	ENSSARG00000012063	RPF2	99	58.140	Sorex_araneus
ENSMICG00000028979	-	96	66.667	ENSSPUG00000005108	RPF2	96	66.667	Sphenodon_punctatus
ENSMICG00000028979	-	98	63.423	ENSSPAG00000008035	rpf2	96	63.423	Stegastes_partitus
ENSMICG00000028979	-	99	79.538	ENSSSCG00000004394	RPF2	99	79.538	Sus_scrofa
ENSMICG00000028979	-	97	72.297	ENSTGUG00000012034	RPF2	96	72.297	Taeniopygia_guttata
ENSMICG00000028979	-	99	59.868	ENSTRUG00000018264	rpf2	98	59.868	Takifugu_rubripes
ENSMICG00000028979	-	97	58.644	ENSTNIG00000002749	rpf2	96	58.644	Tetraodon_nigroviridis
ENSMICG00000028979	-	81	68.127	ENSTBEG00000017151	RPF2	82	68.127	Tupaia_belangeri
ENSMICG00000028979	-	99	78.878	ENSTTRG00000012357	RPF2	99	78.878	Tursiops_truncatus
ENSMICG00000028979	-	99	79.208	ENSUAMG00000013497	RPF2	99	79.208	Ursus_americanus
ENSMICG00000028979	-	99	78.878	ENSUMAG00000025488	RPF2	99	78.878	Ursus_maritimus
ENSMICG00000028979	-	99	79.801	ENSVPAG00000009562	RPF2	99	79.801	Vicugna_pacos
ENSMICG00000028979	-	91	66.786	ENSVVUG00000021231	-	98	66.786	Vulpes_vulpes
ENSMICG00000028979	-	99	71.000	ENSVVUG00000006593	-	99	70.627	Vulpes_vulpes
ENSMICG00000028979	-	100	65.372	ENSXETG00000021335	rpf2	100	65.372	Xenopus_tropicalis
ENSMICG00000028979	-	99	60.726	ENSXCOG00000001590	rpf2	99	60.726	Xiphophorus_couchianus
ENSMICG00000028979	-	99	56.436	ENSXMAG00000021706	rpf2	99	56.436	Xiphophorus_maculatus