EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000029540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 2836 bases
Position: chrX:76477681-76480516
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000019045	RRM_1	PF00076.22	1.1e-27	1	3
ENSMICP00000019045	RRM_1	PF00076.22	1.1e-27	2	3
ENSMICP00000019045	RRM_1	PF00076.22	1.1e-27	3	3
ENSMICP00000031877	RRM_1	PF00076.22	1.3e-27	1	3
ENSMICP00000031877	RRM_1	PF00076.22	1.3e-27	2	3
ENSMICP00000031877	RRM_1	PF00076.22	1.3e-27	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000038590	-	2685	-	ENSMICP00000031877	894 (aa)	-	UPI000C2ED016
ENSMICT00000029221	-	2589	-	ENSMICP00000019045	862 (aa)	-	UPI000C2ECFFC

Gene Model

Click here to download ENSMICG00000029540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000029540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000029540	-	53	63.218	ENSMICG00000036969	RBM12B	59	63.218
ENSMICG00000029540	-	74	88.971	ENSMICG00000032761	-	73	89.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000029540	-	72	84.748	ENSG00000244462	RBM12	100	88.811	Homo_sapiens
ENSMICG00000029540	-	74	87.045	ENSAMEG00000019189	RBM12	75	87.770	Ailuropoda_melanoleuca
ENSMICG00000029540	-	92	82.000	ENSACAG00000006330	RBM12	99	68.282	Anolis_carolinensis
ENSMICG00000029540	-	74	84.294	ENSANAG00000032596	RBM12	73	85.366	Aotus_nancymaae
ENSMICG00000029540	-	100	82.390	ENSBTAG00000044015	RBM12	100	82.914	Bos_taurus
ENSMICG00000029540	-	94	88.710	ENSCAFG00000008256	RBM12	98	83.991	Canis_familiaris
ENSMICG00000029540	-	74	87.537	ENSCAFG00020005650	RBM12	75	88.175	Canis_lupus_dingo
ENSMICG00000029540	-	100	85.033	ENSCHIG00000024592	RBM12	100	85.900	Capra_hircus
ENSMICG00000029540	-	74	86.217	ENSTSYG00000030563	RBM12	72	86.237	Carlito_syrichta
ENSMICG00000029540	-	74	83.566	ENSCPOG00000035170	RBM12	76	83.612	Cavia_porcellus
ENSMICG00000029540	-	74	84.783	ENSCCAG00000036056	-	77	85.137	Cebus_capucinus
ENSMICG00000029540	-	100	63.731	ENSCCAG00000035899	-	100	65.677	Cebus_capucinus
ENSMICG00000029540	-	72	84.460	ENSCATG00000030934	RBM12	98	85.300	Cercocebus_atys
ENSMICG00000029540	-	74	84.884	ENSCLAG00000017230	RBM12	100	81.584	Chinchilla_lanigera
ENSMICG00000029540	-	72	84.317	ENSCANG00000030552	RBM12	98	85.086	Colobus_angolensis_palliatus
ENSMICG00000029540	-	74	68.032	ENSCGRG00001021144	Rbm12	74	81.579	Cricetulus_griseus_chok1gshd
ENSMICG00000029540	-	74	68.032	ENSCGRG00000012719	Rbm12	74	81.579	Cricetulus_griseus_crigri
ENSMICG00000029540	-	100	47.944	ENSDARG00000100636	rbm12	69	44.548	Danio_rerio
ENSMICG00000029540	-	94	87.634	ENSDORG00000028509	-	100	82.609	Dipodomys_ordii
ENSMICG00000029540	-	74	85.260	ENSECAG00000021997	RBM12	75	86.763	Equus_caballus
ENSMICG00000029540	-	58	88.172	ENSEEUG00000008858	-	56	88.855	Erinaceus_europaeus
ENSMICG00000029540	-	72	68.326	ENSFALG00000012516	RBM12	100	68.490	Ficedula_albicollis
ENSMICG00000029540	-	74	84.348	ENSFDAG00000014663	RBM12	75	85.612	Fukomys_damarensis
ENSMICG00000029540	-	90	86.022	ENSGALG00000030253	RBM12	100	71.569	Gallus_gallus
ENSMICG00000029540	-	72	84.748	ENSGGOG00000028500	RBM12	98	85.300	Gorilla_gorilla
ENSMICG00000029540	-	74	83.960	ENSHGLG00000013208	RBM12	75	85.324	Heterocephalus_glaber_female
ENSMICG00000029540	-	89	92.432	ENSHGLG00100019158	RBM12	88	91.892	Heterocephalus_glaber_male
ENSMICG00000029540	-	100	46.129	ENSIPUG00000014491	rbm12	67	48.843	Ictalurus_punctatus
ENSMICG00000029540	-	74	80.423	ENSSTOG00000019739	RBM12	75	80.926	Ictidomys_tridecemlineatus
ENSMICG00000029540	-	100	66.995	ENSJJAG00000009879	-	71	72.755	Jaculus_jaculus
ENSMICG00000029540	-	72	46.686	ENSLOCG00000018363	rbm12	70	47.633	Lepisosteus_oculatus
ENSMICG00000029540	-	74	83.960	ENSLAFG00000010341	RBM12	100	82.497	Loxodonta_africana
ENSMICG00000029540	-	72	84.460	ENSMFAG00000032583	RBM12	98	85.300	Macaca_fascicularis
ENSMICG00000029540	-	72	84.604	ENSMMUG00000020960	CPNE1	100	85.545	Macaca_mulatta
ENSMICG00000029540	-	72	84.604	ENSMNEG00000045365	RBM12	98	85.408	Macaca_nemestrina
ENSMICG00000029540	-	72	84.604	ENSMLEG00000032492	RBM12	98	85.408	Mandrillus_leucophaeus
ENSMICG00000029540	-	70	66.964	ENSMGAG00000001502	RBM12	100	71.302	Meleagris_gallopavo
ENSMICG00000029540	-	73	66.796	ENSMAUG00000012800	Rbm12	100	82.395	Mesocricetus_auratus
ENSMICG00000029540	-	73	67.589	ENSMOCG00000012950	Rbm12	97	82.464	Microtus_ochrogaster
ENSMICG00000029540	-	93	84.360	ENSMODG00000001591	RBM12	100	76.080	Monodelphis_domestica
ENSMICG00000029540	-	95	87.634	MGP_CAROLIEiJ_G0024551	Rbm12	97	82.686	Mus_caroli
ENSMICG00000029540	-	95	87.097	MGP_PahariEiJ_G0025996	Rbm12	97	81.439	Mus_pahari
ENSMICG00000029540	-	73	75.130	MGP_SPRETEiJ_G0025473	Rbm12	98	82.686	Mus_spretus
ENSMICG00000029540	-	72	85.116	ENSMPUG00000017789	-	100	85.714	Mustela_putorius_furo
ENSMICG00000029540	-	72	85.116	ENSMLUG00000011217	RBM12	98	85.468	Myotis_lucifugus
ENSMICG00000029540	-	73	77.836	ENSNGAG00000015846	Rbm12	100	83.188	Nannospalax_galili
ENSMICG00000029540	-	72	84.604	ENSNLEG00000010268	RBM12	98	85.086	Nomascus_leucogenys
ENSMICG00000029540	-	100	77.790	ENSMEUG00000007621	RBM12	100	77.462	Notamacropus_eugenii
ENSMICG00000029540	-	74	81.250	ENSOPRG00000005687	RBM12	75	82.837	Ochotona_princeps
ENSMICG00000029540	-	74	78.571	ENSODEG00000013870	RBM12	76	79.463	Octodon_degus
ENSMICG00000029540	-	72	84.748	ENSPPAG00000040719	RBM12	98	85.300	Pan_paniscus
ENSMICG00000029540	-	72	84.748	ENSPTRG00000013446	RBM12	98	85.300	Pan_troglodytes
ENSMICG00000029540	-	72	84.748	ENSPTRG00000040708	-	98	85.300	Pan_troglodytes
ENSMICG00000029540	-	72	84.604	ENSPANG00000020003	CPNE1	98	85.408	Papio_anubis
ENSMICG00000029540	-	75	84.946	ENSPSIG00000007369	RBM12	70	84.946	Pelodiscus_sinensis
ENSMICG00000029540	-	73	67.013	ENSPEMG00000017769	Rbm12	97	82.319	Peromyscus_maniculatus_bairdii
ENSMICG00000029540	-	79	62.376	ENSPFOG00000023551	rbm12	85	76.056	Poecilia_formosa
ENSMICG00000029540	-	72	84.505	ENSPPYG00000010960	RBM12	100	85.225	Pongo_abelii
ENSMICG00000029540	-	73	83.671	ENSPCAG00000008653	RBM12	100	83.387	Procavia_capensis
ENSMICG00000029540	-	74	87.663	ENSPCOG00000023724	RBM12	73	88.235	Propithecus_coquereli
ENSMICG00000029540	-	56	83.459	ENSPVAG00000014937	RBM12	75	86.331	Pteropus_vampyrus
ENSMICG00000029540	-	73	84.211	ENSRNOG00000019723	Rbm12	97	80.142	Rattus_norvegicus
ENSMICG00000029540	-	73	84.211	ENSRNOG00000049913	LOC100910990	97	80.142	Rattus_norvegicus
ENSMICG00000029540	-	72	84.460	ENSRBIG00000042965	RBM12	98	85.300	Rhinopithecus_bieti
ENSMICG00000029540	-	72	84.460	ENSRROG00000037485	RBM12	98	85.300	Rhinopithecus_roxellana
ENSMICG00000029540	-	56	83.271	ENSSBOG00000027633	RBM12	73	85.079	Saimiri_boliviensis_boliviensis
ENSMICG00000029540	-	91	85.714	ENSSHAG00000018585	RBM12	100	77.208	Sarcophilus_harrisii
ENSMICG00000029540	-	74	84.935	ENSSSCG00000036156	RBM12	75	86.286	Sus_scrofa
ENSMICG00000029540	-	70	67.162	ENSTGUG00000003002	RBM12	100	71.756	Taeniopygia_guttata
ENSMICG00000029540	-	74	85.694	ENSTTRG00000017035	RBM12	75	87.194	Tursiops_truncatus
ENSMICG00000029540	-	62	92.857	ENSVPAG00000003812	RBM12	62	92.857	Vicugna_pacos
ENSMICG00000029540	-	100	55.460	ENSXETG00000033541	RBM12	73	52.882	Xenopus_tropicalis