EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000029683 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 1113 bases
Position: chr14:65458197-65459309
Accession: 31955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046462	RRM_5	PF13893.6	4.3e-15	1	3
ENSMICP00000046462	RRM_5	PF13893.6	4.3e-15	2	3
ENSMICP00000046462	RRM_5	PF13893.6	4.3e-15	3	3
ENSMICP00000046462	RRM_1	PF00076.22	5.4e-84	1	4
ENSMICP00000046462	RRM_1	PF00076.22	5.4e-84	2	4
ENSMICP00000046462	RRM_1	PF00076.22	5.4e-84	3	4
ENSMICP00000046462	RRM_1	PF00076.22	5.4e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000035875	PABPC4L-201	1113	-	ENSMICP00000046462	370 (aa)	-	UPI000C2ECA1D

Gene Model

Click here to download ENSMICG00000029683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000029683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000029683	PABPC4L	98	62.640	ENSMICG00000041706	PABPC5	96	62.637
ENSMICG00000029683	PABPC4L	56	36.111	ENSMICG00000045113	CELF1	78	35.135
ENSMICG00000029683	PABPC4L	98	63.776	ENSMICG00000047642	-	98	63.776
ENSMICG00000029683	PABPC4L	97	30.818	ENSMICG00000008386	TRNAU1AP	76	35.938
ENSMICG00000029683	PABPC4L	59	40.789	ENSMICG00000047440	-	55	40.789
ENSMICG00000029683	PABPC4L	95	37.500	ENSMICG00000006364	RBM23	65	37.500
ENSMICG00000029683	PABPC4L	65	30.719	ENSMICG00000032477	HNRNPA1	55	30.719
ENSMICG00000029683	PABPC4L	72	37.500	ENSMICG00000003506	CELF5	50	36.486
ENSMICG00000029683	PABPC4L	99	72.703	ENSMICG00000009121	PABPC1	72	72.703
ENSMICG00000029683	PABPC4L	97	70.234	ENSMICG00000036729	-	61	69.304
ENSMICG00000029683	PABPC4L	87	32.520	ENSMICG00000009699	ELAVL1	85	32.520
ENSMICG00000029683	PABPC4L	99	72.131	ENSMICG00000011830	PABPC3	60	72.131
ENSMICG00000029683	PABPC4L	99	76.216	ENSMICG00000016633	-	70	76.216
ENSMICG00000029683	PABPC4L	72	36.364	ENSMICG00000010644	CELF3	92	36.364
ENSMICG00000029683	PABPC4L	85	38.158	ENSMICG00000028982	-	90	37.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000029683	PABPC4L	100	95.135	ENSG00000254535	PABPC4L	100	95.135	Homo_sapiens
ENSMICG00000029683	PABPC4L	100	92.432	ENSANAG00000017199	PABPC4L	87	92.432	Aotus_nancymaae
ENSMICG00000029683	PABPC4L	99	89.973	ENSBTAG00000046902	PABPC4L	99	89.973	Bos_taurus
ENSMICG00000029683	PABPC4L	100	92.973	ENSCJAG00000045332	PABPC4L	86	92.973	Callithrix_jacchus
ENSMICG00000029683	PABPC4L	99	72.826	ENSCAFG00020019182	-	54	72.826	Canis_lupus_dingo
ENSMICG00000029683	PABPC4L	99	89.973	ENSCHIG00000007231	PABPC4L	99	89.973	Capra_hircus
ENSMICG00000029683	PABPC4L	98	81.791	ENSCAPG00000000555	PABPC4L	100	81.791	Cavia_aperea
ENSMICG00000029683	PABPC4L	100	78.919	ENSCPOG00000033167	PABPC4L	100	78.919	Cavia_porcellus
ENSMICG00000029683	PABPC4L	100	92.703	ENSCCAG00000031681	PABPC4L	86	92.703	Cebus_capucinus
ENSMICG00000029683	PABPC4L	100	84.054	ENSCLAG00000017628	PABPC4L	100	84.054	Chinchilla_lanigera
ENSMICG00000029683	PABPC4L	100	92.162	ENSCANG00000037677	PABPC4L	100	92.162	Colobus_angolensis_palliatus
ENSMICG00000029683	PABPC4L	100	81.622	ENSCGRG00001002070	Pabpc4l	100	81.622	Cricetulus_griseus_chok1gshd
ENSMICG00000029683	PABPC4L	100	81.622	ENSCGRG00000020086	Pabpc4l	100	81.622	Cricetulus_griseus_crigri
ENSMICG00000029683	PABPC4L	100	91.892	ENSDNOG00000031077	PABPC4L	95	91.892	Dasypus_novemcinctus
ENSMICG00000029683	PABPC4L	99	89.160	ENSEASG00005007883	PABPC4L	99	89.160	Equus_asinus_asinus
ENSMICG00000029683	PABPC4L	99	89.702	ENSECAG00000031416	PABPC4L	99	89.702	Equus_caballus
ENSMICG00000029683	PABPC4L	99	90.515	ENSFCAG00000028270	PABPC4L	99	90.515	Felis_catus
ENSMICG00000029683	PABPC4L	99	84.011	ENSFDAG00000019606	PABPC4L	99	84.011	Fukomys_damarensis
ENSMICG00000029683	PABPC4L	100	94.595	ENSGGOG00000024991	PABPC4L	100	94.595	Gorilla_gorilla
ENSMICG00000029683	PABPC4L	99	84.282	ENSHGLG00000020104	PABPC4L	99	84.282	Heterocephalus_glaber_female
ENSMICG00000029683	PABPC4L	99	84.282	ENSHGLG00100020648	PABPC4L	99	84.282	Heterocephalus_glaber_male
ENSMICG00000029683	PABPC4L	100	87.871	ENSSTOG00000019472	PABPC4L	99	87.871	Ictidomys_tridecemlineatus
ENSMICG00000029683	PABPC4L	99	83.469	ENSJJAG00000004090	Pabpc4l	99	83.469	Jaculus_jaculus
ENSMICG00000029683	PABPC4L	100	81.622	ENSMAUG00000016313	Pabpc4l	100	81.622	Mesocricetus_auratus
ENSMICG00000029683	PABPC4L	100	83.243	ENSMOCG00000007551	Pabpc4l	100	83.243	Microtus_ochrogaster
ENSMICG00000029683	PABPC4L	100	80.000	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.000	Mus_caroli
ENSMICG00000029683	PABPC4L	100	80.270	ENSMUSG00000090919	Pabpc4l	100	80.270	Mus_musculus
ENSMICG00000029683	PABPC4L	100	80.541	MGP_PahariEiJ_G0026409	Pabpc4l	100	80.541	Mus_pahari
ENSMICG00000029683	PABPC4L	100	79.730	MGP_SPRETEiJ_G0025903	Pabpc4l	100	79.730	Mus_spretus
ENSMICG00000029683	PABPC4L	99	78.862	ENSMLUG00000008254	PABPC4L	99	78.862	Myotis_lucifugus
ENSMICG00000029683	PABPC4L	100	87.297	ENSNGAG00000001502	Pabpc4l	100	87.297	Nannospalax_galili
ENSMICG00000029683	PABPC4L	100	95.135	ENSNLEG00000019300	PABPC4L	100	95.135	Nomascus_leucogenys
ENSMICG00000029683	PABPC4L	100	88.649	ENSOGAG00000026166	PABPC4L	100	88.649	Otolemur_garnettii
ENSMICG00000029683	PABPC4L	99	94.427	ENSPPAG00000043745	PABPC4L	93	94.427	Pan_paniscus
ENSMICG00000029683	PABPC4L	99	89.973	ENSPPRG00000018628	PABPC4L	99	89.973	Panthera_pardus
ENSMICG00000029683	PABPC4L	99	90.515	ENSPTIG00000010106	PABPC4L	99	90.515	Panthera_tigris_altaica
ENSMICG00000029683	PABPC4L	99	94.427	ENSPTRG00000045513	-	80	94.427	Pan_troglodytes
ENSMICG00000029683	PABPC4L	100	82.162	ENSPEMG00000012565	Pabpc4l	100	82.162	Peromyscus_maniculatus_bairdii
ENSMICG00000029683	PABPC4L	100	98.108	ENSPCOG00000025578	PABPC4L	100	98.108	Propithecus_coquereli
ENSMICG00000029683	PABPC4L	100	80.811	ENSRNOG00000029749	Pabpc4l	100	80.811	Rattus_norvegicus
ENSMICG00000029683	PABPC4L	100	91.622	ENSRBIG00000030229	PABPC4L	100	91.622	Rhinopithecus_bieti
ENSMICG00000029683	PABPC4L	100	91.351	ENSRROG00000020367	PABPC4L	100	91.351	Rhinopithecus_roxellana
ENSMICG00000029683	PABPC4L	100	91.892	ENSSBOG00000016382	PABPC4L	100	91.892	Saimiri_boliviensis_boliviensis
ENSMICG00000029683	PABPC4L	99	83.740	ENSSSCG00000009067	PABPC4L	99	83.740	Sus_scrofa
ENSMICG00000029683	PABPC4L	99	89.973	ENSUAMG00000001289	PABPC4L	99	89.973	Ursus_americanus
ENSMICG00000029683	PABPC4L	99	89.973	ENSUMAG00000014887	PABPC4L	99	89.973	Ursus_maritimus
ENSMICG00000029683	PABPC4L	89	75.904	ENSVVUG00000011060	-	76	75.904	Vulpes_vulpes