EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000029915 (Gene tree)
Gene ID: 105863472
Gene Symbol: -
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 2259 bases
Position: chr2:41803780-41806038
Accession: 105863472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000025951	MMR_HSR1	PF01926.23	8.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000045524	-	1635	XM_012750560	ENSMICP00000025951	218 (aa)	XP_012606014	UPI00064359ED

Gene Model

Click here to download ENSMICG00000029915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000029915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000029915	-	97	37.209	ENSMICG00000003350	RAB14	96	37.209
ENSMICG00000029915	-	91	33.333	ENSMICG00000049130	RAB5A	89	32.828
ENSMICG00000029915	-	75	31.325	ENSMICG00000015683	RAB36	51	32.530
ENSMICG00000029915	-	78	30.814	ENSMICG00000038752	-	83	30.814
ENSMICG00000029915	-	81	43.575	ENSMICG00000029171	RAB1B	85	43.575
ENSMICG00000029915	-	77	41.916	ENSMICG00000012002	RAB30	79	41.916
ENSMICG00000029915	-	87	38.947	ENSMICG00000034540	RAB2A	98	36.279
ENSMICG00000029915	-	74	31.707	ENSMICG00000014668	REM1	53	30.488
ENSMICG00000029915	-	78	38.596	ENSMICG00000047356	RAB35	89	37.433
ENSMICG00000029915	-	79	37.500	ENSMICG00000003057	RAB9B	83	37.500
ENSMICG00000029915	-	70	35.948	ENSMICG00000033790	RHEB	92	34.641
ENSMICG00000029915	-	78	40.678	ENSMICG00000034809	-	73	39.548
ENSMICG00000029915	-	82	39.106	ENSMICG00000034065	-	94	35.377
ENSMICG00000029915	-	81	43.017	ENSMICG00000012587	RAB1A	83	43.017
ENSMICG00000029915	-	76	38.462	ENSMICG00000034851	RAB33A	69	37.278
ENSMICG00000029915	-	78	36.842	ENSMICG00000013101	RAB15	77	36.257
ENSMICG00000029915	-	79	35.465	ENSMICG00000041608	RAB5C	91	32.353
ENSMICG00000029915	-	88	36.649	ENSMICG00000017280	RAB18	88	36.126
ENSMICG00000029915	-	77	42.353	ENSMICG00000010340	-	80	42.353
ENSMICG00000029915	-	81	36.667	ENSMICG00000041433	-	85	36.667
ENSMICG00000029915	-	63	36.232	ENSMICG00000006472	HRAS	67	36.719
ENSMICG00000029915	-	64	36.691	ENSMICG00000036237	-	91	30.814
ENSMICG00000029915	-	80	37.931	ENSMICG00000014037	RAB23	70	37.931
ENSMICG00000029915	-	83	36.316	ENSMICG00000049590	RAB6B	94	36.139
ENSMICG00000029915	-	78	32.544	ENSMICG00000008382	-	84	31.953
ENSMICG00000029915	-	78	34.320	ENSMICG00000011086	RAB5B	79	32.955
ENSMICG00000029915	-	78	40.000	ENSMICG00000002230	RAB25	77	39.412
ENSMICG00000029915	-	78	38.462	ENSMICG00000031565	RAB6A	84	38.122
ENSMICG00000029915	-	70	32.895	ENSMICG00000006266	RERG	72	30.263
ENSMICG00000029915	-	80	36.571	ENSMICG00000030661	RAB12	71	36.066
ENSMICG00000029915	-	81	40.341	ENSMICG00000041504	RAB11A	78	39.205
ENSMICG00000029915	-	87	47.090	ENSMICG00000044410	RAB39B	86	46.561
ENSMICG00000029915	-	63	37.681	ENSMICG00000001474	CASC1	67	38.281
ENSMICG00000029915	-	78	31.953	ENSMICG00000002882	RAB31	88	30.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000029915	-	100	89.908	ENSANAG00000035487	-	100	89.908	Aotus_nancymaae
ENSMICG00000029915	-	100	85.000	ENSBTAG00000021525	-	100	82.727	Bos_taurus
ENSMICG00000029915	-	99	61.574	ENSCPBG00000011245	RAB42	99	61.722	Chrysemys_picta_bellii
ENSMICG00000029915	-	100	78.539	ENSCGRG00001019426	Rab42	100	78.539	Cricetulus_griseus_chok1gshd
ENSMICG00000029915	-	100	77.273	ENSDORG00000023607	Rab42	100	77.064	Dipodomys_ordii
ENSMICG00000029915	-	100	84.862	ENSFCAG00000037124	-	100	84.862	Felis_catus
ENSMICG00000029915	-	98	61.682	ENSGAGG00000004921	RAB42	99	60.476	Gopherus_agassizii
ENSMICG00000029915	-	100	84.862	ENSSTOG00000000084	-	100	82.110	Ictidomys_tridecemlineatus
ENSMICG00000029915	-	100	78.539	ENSMAUG00000020223	Rab42	100	78.539	Mesocricetus_auratus
ENSMICG00000029915	-	100	80.275	ENSMOCG00000021639	Rab42	100	80.275	Microtus_ochrogaster
ENSMICG00000029915	-	97	65.094	ENSMODG00000023873	-	95	64.623	Monodelphis_domestica
ENSMICG00000029915	-	100	83.028	ENSNGAG00000015676	Rab42	100	83.028	Nannospalax_galili
ENSMICG00000029915	-	100	92.661	ENSOGAG00000006951	-	100	92.661	Otolemur_garnettii
ENSMICG00000029915	-	99	62.791	ENSPSIG00000006831	RAB42	94	61.860	Pelodiscus_sinensis
ENSMICG00000029915	-	100	95.413	ENSPCOG00000008605	-	100	95.413	Propithecus_coquereli
ENSMICG00000029915	-	96	80.952	ENSSARG00000007565	-	100	78.571	Sorex_araneus
ENSMICG00000029915	-	98	60.648	ENSSPUG00000010337	RAB42	98	59.722	Sphenodon_punctatus
ENSMICG00000029915	-	100	86.364	ENSSSCG00000030432	-	100	85.455	Sus_scrofa