EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000030403 (Gene tree)
Gene ID: 105864129
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 430221 bases
Position: chr12:85820392-86250612
Accession: 105864129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024261	Arb2	PF09757.9	6.3e-10	1	1
ENSMICP00000021497	Arb2	PF09757.9	1.3e-09	1	1
ENSMICP00000047086	Arb2	PF09757.9	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000043188	FAM172A-203	921	-	ENSMICP00000022454	306 (aa)	-	UPI000642F676
ENSMICT00000061722	FAM172A-202	1327	-	ENSMICP00000047086	440 (aa)	-	UPI000C2EBE73
ENSMICT00000037115	FAM172A-201	1451	XM_012751806	ENSMICP00000021497	416 (aa)	XP_012607260	UPI0006431F44
ENSMICT00000048848	FAM172A-204	930	-	ENSMICP00000024261	309 (aa)	-	UPI000C2ED3EA

Gene Model

Click here to download ENSMICG00000030403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000030403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000030403	FAM172A	100	98.558	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSMICG00000030403	FAM172A	61	41.270	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSMICG00000030403	FAM172A	100	87.019	ENSAPLG00000004055	FAM172A	100	87.019	Anas_platyrhynchos
ENSMICG00000030403	FAM172A	91	87.566	ENSACAG00000013305	FAM172A	98	87.566	Anolis_carolinensis
ENSMICG00000030403	FAM172A	88	97.802	ENSANAG00000035869	FAM172A	93	100.000	Aotus_nancymaae
ENSMICG00000030403	FAM172A	100	98.317	ENSBTAG00000050195	FAM172A	100	98.317	Bos_taurus
ENSMICG00000030403	FAM172A	100	99.038	ENSCJAG00000010444	FAM172A	100	99.038	Callithrix_jacchus
ENSMICG00000030403	FAM172A	89	99.189	ENSCAFG00000008064	FAM172A	99	99.189	Canis_familiaris
ENSMICG00000030403	FAM172A	100	97.596	ENSCAFG00020006210	FAM172A	100	97.596	Canis_lupus_dingo
ENSMICG00000030403	FAM172A	100	98.077	ENSCHIG00000008440	FAM172A	100	98.077	Capra_hircus
ENSMICG00000030403	FAM172A	86	98.496	ENSTSYG00000006286	FAM172A	85	98.496	Carlito_syrichta
ENSMICG00000030403	FAM172A	55	86.726	ENSCAPG00000014103	-	100	86.726	Cavia_aperea
ENSMICG00000030403	FAM172A	100	98.558	ENSCCAG00000023116	FAM172A	100	98.649	Cebus_capucinus
ENSMICG00000030403	FAM172A	100	88.702	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSMICG00000030403	FAM172A	87	44.853	ENSCPBG00000004402	-	96	43.631	Chrysemys_picta_bellii
ENSMICG00000030403	FAM172A	94	97.603	ENSCANG00000040412	FAM172A	99	97.603	Colobus_angolensis_palliatus
ENSMICG00000030403	FAM172A	100	98.558	ENSDNOG00000004689	FAM172A	100	98.558	Dasypus_novemcinctus
ENSMICG00000030403	FAM172A	93	97.569	ENSDORG00000013558	Fam172a	94	97.569	Dipodomys_ordii
ENSMICG00000030403	FAM172A	90	39.785	ENSEBUG00000016097	-	62	40.303	Eptatretus_burgeri
ENSMICG00000030403	FAM172A	99	95.195	ENSECAG00000018274	FAM172A	100	95.433	Equus_caballus
ENSMICG00000030403	FAM172A	100	85.577	ENSEEUG00000002887	FAM172A	100	85.577	Erinaceus_europaeus
ENSMICG00000030403	FAM172A	98	69.024	ENSELUG00000017647	fam172a	97	69.024	Esox_lucius
ENSMICG00000030403	FAM172A	100	98.798	ENSFCAG00000025443	FAM172A	100	98.798	Felis_catus
ENSMICG00000030403	FAM172A	87	44.485	ENSFALG00000006501	-	100	43.454	Ficedula_albicollis
ENSMICG00000030403	FAM172A	87	88.430	ENSFALG00000009072	FAM172A	98	88.430	Ficedula_albicollis
ENSMICG00000030403	FAM172A	100	87.260	ENSGALG00000014661	FAM172A	100	87.260	Gallus_gallus
ENSMICG00000030403	FAM172A	100	90.625	ENSGAGG00000003839	FAM172A	100	90.625	Gopherus_agassizii
ENSMICG00000030403	FAM172A	87	45.588	ENSGAGG00000022828	-	93	45.042	Gopherus_agassizii
ENSMICG00000030403	FAM172A	100	98.317	ENSGGOG00000010296	FAM172A	100	98.317	Gorilla_gorilla
ENSMICG00000030403	FAM172A	97	95.556	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSMICG00000030403	FAM172A	89	97.561	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSMICG00000030403	FAM172A	100	98.317	ENSSTOG00000009918	FAM172A	100	98.317	Ictidomys_tridecemlineatus
ENSMICG00000030403	FAM172A	87	48.148	ENSLACG00000001532	si:ch73-41e3.7	92	49.138	Latimeria_chalumnae
ENSMICG00000030403	FAM172A	100	75.179	ENSLOCG00000001629	fam172a	100	75.895	Lepisosteus_oculatus
ENSMICG00000030403	FAM172A	94	96.918	ENSMFAG00000001171	FAM172A	99	96.918	Macaca_fascicularis
ENSMICG00000030403	FAM172A	100	97.727	ENSMNEG00000039938	FAM172A	99	96.918	Macaca_nemestrina
ENSMICG00000030403	FAM172A	89	95.405	ENSMOCG00000003613	Fam172a	100	95.405	Microtus_ochrogaster
ENSMICG00000030403	FAM172A	100	90.385	ENSMODG00000020131	FAM172A	100	90.385	Monodelphis_domestica
ENSMICG00000030403	FAM172A	75	96.203	MGP_PahariEiJ_G0015818	Fam172a	100	96.203	Mus_pahari
ENSMICG00000030403	FAM172A	89	98.378	ENSNGAG00000019570	Fam172a	100	98.378	Nannospalax_galili
ENSMICG00000030403	FAM172A	94	97.578	ENSNLEG00000013903	FAM172A	95	97.578	Nomascus_leucogenys
ENSMICG00000030403	FAM172A	89	89.459	ENSOANG00000011068	FAM172A	99	89.459	Ornithorhynchus_anatinus
ENSMICG00000030403	FAM172A	97	98.025	ENSOCUG00000007299	FAM172A	96	98.025	Oryctolagus_cuniculus
ENSMICG00000030403	FAM172A	100	96.635	ENSOGAG00000015189	FAM172A	100	96.635	Otolemur_garnettii
ENSMICG00000030403	FAM172A	87	97.770	ENSOARG00000016711	FAM172A	87	95.300	Ovis_aries
ENSMICG00000030403	FAM172A	94	97.260	ENSPPAG00000030542	FAM172A	99	97.260	Pan_paniscus
ENSMICG00000030403	FAM172A	100	98.798	ENSPPRG00000006653	FAM172A	100	98.798	Panthera_pardus
ENSMICG00000030403	FAM172A	100	98.798	ENSPTIG00000012681	FAM172A	100	98.798	Panthera_tigris_altaica
ENSMICG00000030403	FAM172A	94	97.260	ENSPTRG00000017074	FAM172A	99	97.260	Pan_troglodytes
ENSMICG00000030403	FAM172A	94	96.918	ENSPANG00000011687	FAM172A	99	96.918	Papio_anubis
ENSMICG00000030403	FAM172A	97	72.906	ENSPKIG00000012314	fam172a	91	92.647	Paramormyrops_kingsleyae
ENSMICG00000030403	FAM172A	100	95.673	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSMICG00000030403	FAM172A	100	90.144	ENSPCIG00000028612	FAM172A	100	90.144	Phascolarctos_cinereus
ENSMICG00000030403	FAM172A	65	100.000	ENSPCOG00000024072	FAM172A	93	99.127	Propithecus_coquereli
ENSMICG00000030403	FAM172A	88	95.203	ENSRNOG00000013844	Fam172a	100	95.203	Rattus_norvegicus
ENSMICG00000030403	FAM172A	58	91.061	ENSRBIG00000028680	-	80	91.061	Rhinopithecus_bieti
ENSMICG00000030403	FAM172A	94	97.603	ENSRROG00000023807	FAM172A	99	97.603	Rhinopithecus_roxellana
ENSMICG00000030403	FAM172A	100	98.798	ENSSBOG00000019860	FAM172A	100	98.798	Saimiri_boliviensis_boliviensis
ENSMICG00000030403	FAM172A	100	89.904	ENSSHAG00000013743	FAM172A	100	89.904	Sarcophilus_harrisii
ENSMICG00000030403	FAM172A	100	87.260	ENSSPUG00000008161	FAM172A	100	87.260	Sphenodon_punctatus
ENSMICG00000030403	FAM172A	100	98.798	ENSSSCG00000027608	FAM172A	100	99.459	Sus_scrofa
ENSMICG00000030403	FAM172A	91	87.105	ENSTGUG00000000715	FAM172A	100	87.105	Taeniopygia_guttata
ENSMICG00000030403	FAM172A	95	43.813	ENSTGUG00000013623	-	100	46.726	Taeniopygia_guttata
ENSMICG00000030403	FAM172A	78	56.970	ENSTNIG00000009902	fam172a	99	59.036	Tetraodon_nigroviridis
ENSMICG00000030403	FAM172A	100	95.192	ENSTTRG00000001521	FAM172A	100	95.192	Tursiops_truncatus
ENSMICG00000030403	FAM172A	100	99.279	ENSUMAG00000005442	FAM172A	100	99.279	Ursus_maritimus
ENSMICG00000030403	FAM172A	100	97.596	ENSVVUG00000022112	FAM172A	100	97.596	Vulpes_vulpes
ENSMICG00000030403	FAM172A	92	42.857	ENSXETG00000033027	-	100	42.857	Xenopus_tropicalis
ENSMICG00000030403	FAM172A	100	79.952	ENSXETG00000011592	fam172a	99	79.952	Xenopus_tropicalis