EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000030494 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 3585 bases
Position: chrX:63860111-63863695
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024090	LSM	PF01423.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000055177	-	378	-	ENSMICP00000024090	125 (aa)	-	UPI000C2E9FDF

Gene Model

Click here to download ENSMICG00000030494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000030494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000030494	-	60	93.333	ENSMICG00000012153	-	87	93.333
ENSMICG00000030494	-	53	46.970	ENSMICG00000042599	LSM6	83	46.970
ENSMICG00000030494	-	51	43.750	ENSMICG00000047411	-	75	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000030494	-	60	93.333	ENSG00000139343	SNRPF	87	93.333	Homo_sapiens
ENSMICG00000030494	-	67	82.143	ENSAPOG00000003377	snrpf	64	82.927	Acanthochromis_polyacanthus
ENSMICG00000030494	-	61	82.895	ENSAMEG00000018718	-	87	84.000	Ailuropoda_melanoleuca
ENSMICG00000030494	-	59	93.243	ENSAMEG00000002166	-	87	93.243	Ailuropoda_melanoleuca
ENSMICG00000030494	-	58	90.411	ENSACIG00000013216	snrpf	86	90.411	Amphilophus_citrinellus
ENSMICG00000030494	-	58	90.411	ENSAOCG00000015108	snrpf	86	90.411	Amphiprion_ocellaris
ENSMICG00000030494	-	58	90.411	ENSAPEG00000022022	snrpf	86	90.411	Amphiprion_percula
ENSMICG00000030494	-	58	90.411	ENSATEG00000022625	snrpf	78	90.411	Anabas_testudineus
ENSMICG00000030494	-	59	91.892	ENSACAG00000014073	SNRPF	85	91.892	Anolis_carolinensis
ENSMICG00000030494	-	80	72.000	ENSANAG00000020297	-	77	71.000	Aotus_nancymaae
ENSMICG00000030494	-	60	64.000	ENSANAG00000025860	-	85	64.000	Aotus_nancymaae
ENSMICG00000030494	-	60	93.333	ENSANAG00000032845	SNRPF	87	93.333	Aotus_nancymaae
ENSMICG00000030494	-	58	90.411	ENSACLG00000016066	snrpf	86	90.411	Astatotilapia_calliptera
ENSMICG00000030494	-	60	88.000	ENSAMXG00000007421	snrpf	87	88.000	Astyanax_mexicanus
ENSMICG00000030494	-	62	87.179	ENSBTAG00000050012	-	93	86.667	Bos_taurus
ENSMICG00000030494	-	60	93.333	ENSBTAG00000016271	SNRPF	87	93.333	Bos_taurus
ENSMICG00000030494	-	62	66.234	WBGene00004918	snr-5	85	68.056	Caenorhabditis_elegans
ENSMICG00000030494	-	60	93.333	ENSCJAG00000002705	-	87	93.333	Callithrix_jacchus
ENSMICG00000030494	-	77	84.375	ENSCAFG00000006395	-	86	84.375	Canis_familiaris
ENSMICG00000030494	-	58	84.932	ENSCAFG00000031151	-	87	85.333	Canis_familiaris
ENSMICG00000030494	-	62	82.051	ENSCAFG00020013161	-	74	90.000	Canis_lupus_dingo
ENSMICG00000030494	-	58	84.932	ENSCAFG00020010823	-	87	85.333	Canis_lupus_dingo
ENSMICG00000030494	-	86	73.148	ENSTSYG00000031636	-	61	91.781	Carlito_syrichta
ENSMICG00000030494	-	60	81.333	ENSTSYG00000030635	-	87	81.333	Carlito_syrichta
ENSMICG00000030494	-	60	86.842	ENSTSYG00000036502	-	87	86.842	Carlito_syrichta
ENSMICG00000030494	-	59	93.243	ENSCAPG00000007242	SNRPF	87	93.243	Cavia_aperea
ENSMICG00000030494	-	60	93.333	ENSCPOG00000013898	SNRPF	87	93.333	Cavia_porcellus
ENSMICG00000030494	-	69	93.023	ENSCCAG00000017356	-	87	93.333	Cebus_capucinus
ENSMICG00000030494	-	82	79.412	ENSCCAG00000033627	-	60	84.211	Cebus_capucinus
ENSMICG00000030494	-	60	93.333	ENSCCAG00000037378	-	87	93.333	Cebus_capucinus
ENSMICG00000030494	-	60	93.333	ENSCLAG00000007200	SNRPF	87	93.333	Chinchilla_lanigera
ENSMICG00000030494	-	85	84.906	ENSCSAG00000003602	-	86	84.906	Chlorocebus_sabaeus
ENSMICG00000030494	-	51	93.750	ENSCHOG00000009392	SNRPF	100	93.750	Choloepus_hoffmanni
ENSMICG00000030494	-	69	83.721	ENSCPBG00000026463	-	87	84.000	Chrysemys_picta_bellii
ENSMICG00000030494	-	69	82.558	ENSCPBG00000001985	-	89	84.000	Chrysemys_picta_bellii
ENSMICG00000030494	-	89	73.214	ENSCPBG00000024287	-	66	82.927	Chrysemys_picta_bellii
ENSMICG00000030494	-	60	86.667	ENSCPBG00000006227	-	87	86.667	Chrysemys_picta_bellii
ENSMICG00000030494	-	70	79.545	ENSCSAVG00000007498	-	88	80.519	Ciona_savignyi
ENSMICG00000030494	-	60	93.333	ENSCGRG00001017100	-	87	93.333	Cricetulus_griseus_chok1gshd
ENSMICG00000030494	-	60	86.667	ENSCGRG00001008965	-	58	86.667	Cricetulus_griseus_chok1gshd
ENSMICG00000030494	-	60	93.333	ENSCGRG00000000336	-	87	93.333	Cricetulus_griseus_crigri
ENSMICG00000030494	-	64	87.500	ENSCGRG00000018878	-	94	86.667	Cricetulus_griseus_crigri
ENSMICG00000030494	-	60	89.333	ENSCSEG00000004748	snrpf	87	89.333	Cynoglossus_semilaevis
ENSMICG00000030494	-	59	90.541	ENSCVAG00000000397	snrpf	59	90.541	Cyprinodon_variegatus
ENSMICG00000030494	-	60	88.312	ENSDARG00000105037	snrpf	88	88.312	Danio_rerio
ENSMICG00000030494	-	85	81.132	ENSDNOG00000043775	-	68	81.132	Dasypus_novemcinctus
ENSMICG00000030494	-	81	67.327	ENSDNOG00000049373	-	80	67.327	Dasypus_novemcinctus
ENSMICG00000030494	-	78	85.567	ENSDNOG00000048989	-	87	85.567	Dasypus_novemcinctus
ENSMICG00000030494	-	56	97.143	ENSDORG00000029740	-	85	97.143	Dipodomys_ordii
ENSMICG00000030494	-	58	84.722	ENSDORG00000025351	-	100	84.722	Dipodomys_ordii
ENSMICG00000030494	-	70	69.318	FBgn0000426	SmF	88	71.429	Drosophila_melanogaster
ENSMICG00000030494	-	60	93.333	ENSETEG00000001558	-	87	93.333	Echinops_telfairi
ENSMICG00000030494	-	65	71.605	ENSEBUG00000001793	-	72	80.597	Eptatretus_burgeri
ENSMICG00000030494	-	85	83.019	ENSECAG00000019817	SNRPF	86	83.019	Equus_caballus
ENSMICG00000030494	-	59	93.243	ENSEEUG00000013509	SNRPF	87	93.243	Erinaceus_europaeus
ENSMICG00000030494	-	60	88.000	ENSELUG00000003121	RUXF	87	88.000	Esox_lucius
ENSMICG00000030494	-	93	68.966	ENSELUG00000007737	RUXF	86	86.667	Esox_lucius
ENSMICG00000030494	-	87	69.725	ENSFCAG00000031148	-	78	74.118	Felis_catus
ENSMICG00000030494	-	60	93.333	ENSFCAG00000029966	-	87	93.333	Felis_catus
ENSMICG00000030494	-	60	74.667	ENSFCAG00000021942	-	87	74.667	Felis_catus
ENSMICG00000030494	-	59	93.243	ENSFALG00000010799	SNRPF	86	93.243	Ficedula_albicollis
ENSMICG00000030494	-	60	93.333	ENSFDAG00000002831	-	87	93.333	Fukomys_damarensis
ENSMICG00000030494	-	59	90.541	ENSFHEG00000003240	snrpf	65	90.541	Fundulus_heteroclitus
ENSMICG00000030494	-	59	90.541	ENSGMOG00000007741	snrpf	87	90.541	Gadus_morhua
ENSMICG00000030494	-	60	93.333	ENSGALG00000011409	SNRPF	87	93.333	Gallus_gallus
ENSMICG00000030494	-	58	90.411	ENSGAFG00000016187	snrpf	84	90.411	Gambusia_affinis
ENSMICG00000030494	-	59	89.189	ENSGACG00000020055	snrpf	87	89.189	Gasterosteus_aculeatus
ENSMICG00000030494	-	70	89.773	ENSGAGG00000012945	-	71	92.208	Gopherus_agassizii
ENSMICG00000030494	-	54	82.353	ENSGAGG00000014132	-	82	82.353	Gopherus_agassizii
ENSMICG00000030494	-	63	84.810	ENSGAGG00000022991	-	80	86.765	Gopherus_agassizii
ENSMICG00000030494	-	50	90.476	ENSGAGG00000020974	-	55	86.364	Gopherus_agassizii
ENSMICG00000030494	-	63	73.418	ENSGGOG00000039564	-	90	72.000	Gorilla_gorilla
ENSMICG00000030494	-	67	78.571	ENSGGOG00000039936	-	83	76.000	Gorilla_gorilla
ENSMICG00000030494	-	60	93.333	ENSGGOG00000001127	-	87	93.333	Gorilla_gorilla
ENSMICG00000030494	-	60	93.333	ENSHGLG00000009108	SNRPF	87	93.333	Heterocephalus_glaber_female
ENSMICG00000030494	-	60	92.000	ENSHGLG00000021172	-	87	92.000	Heterocephalus_glaber_female
ENSMICG00000030494	-	59	93.243	ENSHGLG00100008103	-	87	93.243	Heterocephalus_glaber_male
ENSMICG00000030494	-	60	92.000	ENSHGLG00100019596	-	87	92.000	Heterocephalus_glaber_male
ENSMICG00000030494	-	54	77.027	ENSHCOG00000018663	snrpf	58	77.027	Hippocampus_comes
ENSMICG00000030494	-	60	90.667	ENSIPUG00000018994	snrpf	87	90.667	Ictalurus_punctatus
ENSMICG00000030494	-	60	93.333	ENSSTOG00000010434	-	87	93.333	Ictidomys_tridecemlineatus
ENSMICG00000030494	-	54	91.045	ENSJJAG00000004828	-	86	92.857	Jaculus_jaculus
ENSMICG00000030494	-	60	93.333	ENSJJAG00000011272	-	87	93.333	Jaculus_jaculus
ENSMICG00000030494	-	69	77.907	ENSJJAG00000004558	-	89	78.667	Jaculus_jaculus
ENSMICG00000030494	-	69	82.558	ENSJJAG00000010502	-	89	84.000	Jaculus_jaculus
ENSMICG00000030494	-	60	89.333	ENSKMAG00000013566	snrpf	87	89.333	Kryptolebias_marmoratus
ENSMICG00000030494	-	60	89.333	ENSLBEG00000008800	snrpf	87	89.333	Labrus_bergylta
ENSMICG00000030494	-	62	89.610	ENSLACG00000002456	-	66	89.610	Latimeria_chalumnae
ENSMICG00000030494	-	60	88.000	ENSLOCG00000015744	snrpf	87	88.000	Lepisosteus_oculatus
ENSMICG00000030494	-	59	93.243	ENSLAFG00000017426	SNRPF	86	93.243	Loxodonta_africana
ENSMICG00000030494	-	58	89.041	ENSMAMG00000016593	snrpf	86	89.041	Mastacembelus_armatus
ENSMICG00000030494	-	58	90.411	ENSMZEG00005014701	snrpf	86	90.411	Maylandia_zebra
ENSMICG00000030494	-	63	87.342	ENSMGAG00000011453	-	71	87.342	Meleagris_gallopavo
ENSMICG00000030494	-	59	97.297	ENSMAUG00000016909	-	100	97.297	Mesocricetus_auratus
ENSMICG00000030494	-	60	88.000	ENSMAUG00000008799	-	87	88.000	Mesocricetus_auratus
ENSMICG00000030494	-	59	97.297	ENSMAUG00000019737	-	100	97.297	Mesocricetus_auratus
ENSMICG00000030494	-	66	72.289	ENSMAUG00000010289	-	86	72.222	Mesocricetus_auratus
ENSMICG00000030494	-	53	78.788	ENSMOCG00000020220	-	84	78.788	Microtus_ochrogaster
ENSMICG00000030494	-	60	93.333	ENSMOCG00000020437	Snrpf	87	93.333	Microtus_ochrogaster
ENSMICG00000030494	-	60	78.667	ENSMOCG00000022166	-	82	78.667	Microtus_ochrogaster
ENSMICG00000030494	-	59	89.189	ENSMMOG00000007127	snrpf	87	89.189	Mola_mola
ENSMICG00000030494	-	69	87.209	ENSMODG00000008091	SNRPF	72	90.244	Monodelphis_domestica
ENSMICG00000030494	-	58	90.411	ENSMALG00000012328	snrpf	86	90.411	Monopterus_albus
ENSMICG00000030494	-	60	93.333	MGP_CAROLIEiJ_G0015735	-	87	93.333	Mus_caroli
ENSMICG00000030494	-	60	93.333	ENSMUSG00000020018	Snrpf	87	93.333	Mus_musculus
ENSMICG00000030494	-	60	93.333	MGP_PahariEiJ_G0031350	Snrpf	87	93.333	Mus_pahari
ENSMICG00000030494	-	60	93.333	MGP_SPRETEiJ_G0016553	Snrpf	87	93.333	Mus_spretus
ENSMICG00000030494	-	81	79.208	ENSMPUG00000007176	-	90	79.208	Mustela_putorius_furo
ENSMICG00000030494	-	59	93.243	ENSMLUG00000013577	-	87	93.243	Myotis_lucifugus
ENSMICG00000030494	-	76	85.263	ENSMLUG00000029201	-	90	85.263	Myotis_lucifugus
ENSMICG00000030494	-	76	85.263	ENSMLUG00000026149	-	90	85.263	Myotis_lucifugus
ENSMICG00000030494	-	75	73.404	ENSMLUG00000026269	-	77	70.732	Myotis_lucifugus
ENSMICG00000030494	-	76	85.263	ENSMLUG00000027932	-	90	85.263	Myotis_lucifugus
ENSMICG00000030494	-	50	90.476	ENSNGAG00000005851	-	71	90.000	Nannospalax_galili
ENSMICG00000030494	-	60	93.333	ENSNGAG00000024292	-	87	93.333	Nannospalax_galili
ENSMICG00000030494	-	59	90.541	ENSNBRG00000011682	snrpf	76	90.541	Neolamprologus_brichardi
ENSMICG00000030494	-	59	63.514	ENSMEUG00000000671	SNRPF	87	63.514	Notamacropus_eugenii
ENSMICG00000030494	-	60	93.333	ENSODEG00000010328	-	87	93.333	Octodon_degus
ENSMICG00000030494	-	79	80.198	ENSOCUG00000010925	SNRPF	90	77.451	Oryctolagus_cuniculus
ENSMICG00000030494	-	59	87.838	ENSORLG00020008216	snrpf	87	87.838	Oryzias_latipes_hni
ENSMICG00000030494	-	59	87.838	ENSORLG00015007418	snrpf	87	87.838	Oryzias_latipes_hsok
ENSMICG00000030494	-	58	89.041	ENSOMEG00000003018	snrpf	86	89.041	Oryzias_melastigma
ENSMICG00000030494	-	60	93.333	ENSOGAG00000030323	-	87	93.333	Otolemur_garnettii
ENSMICG00000030494	-	78	81.188	ENSOARG00000011853	-	88	81.188	Ovis_aries
ENSMICG00000030494	-	63	74.684	ENSPPAG00000037479	-	91	73.333	Pan_paniscus
ENSMICG00000030494	-	67	78.571	ENSPPAG00000037544	-	83	76.000	Pan_paniscus
ENSMICG00000030494	-	67	75.000	ENSPPRG00000007449	-	77	74.667	Panthera_pardus
ENSMICG00000030494	-	60	93.333	ENSPPRG00000005875	-	87	93.333	Panthera_pardus
ENSMICG00000030494	-	60	93.333	ENSPTIG00000007520	SNRPF	87	93.333	Panthera_tigris_altaica
ENSMICG00000030494	-	67	77.381	ENSPTIG00000005117	-	90	75.000	Panthera_tigris_altaica
ENSMICG00000030494	-	67	78.571	ENSPTRG00000043814	-	83	76.000	Pan_troglodytes
ENSMICG00000030494	-	63	74.684	ENSPTRG00000047717	-	91	73.333	Pan_troglodytes
ENSMICG00000030494	-	59	90.541	ENSPKIG00000014784	snrpf	81	90.541	Paramormyrops_kingsleyae
ENSMICG00000030494	-	59	93.243	ENSPSIG00000016462	SNRPF	86	93.243	Pelodiscus_sinensis
ENSMICG00000030494	-	59	89.189	ENSPMGG00000023548	snrpf	87	89.189	Periophthalmus_magnuspinnatus
ENSMICG00000030494	-	60	93.333	ENSPEMG00000023326	Snrpf	87	93.333	Peromyscus_maniculatus_bairdii
ENSMICG00000030494	-	58	90.411	ENSPLAG00000023932	snrpf	86	90.411	Poecilia_latipinna
ENSMICG00000030494	-	58	90.411	ENSPMEG00000003377	snrpf	86	90.411	Poecilia_mexicana
ENSMICG00000030494	-	58	90.411	ENSPREG00000022635	snrpf	84	90.411	Poecilia_reticulata
ENSMICG00000030494	-	60	93.333	ENSPPYG00000004847	-	87	93.333	Pongo_abelii
ENSMICG00000030494	-	60	93.333	ENSPCOG00000023833	-	87	93.333	Propithecus_coquereli
ENSMICG00000030494	-	60	93.333	ENSPVAG00000009036	SNRPF	87	93.333	Pteropus_vampyrus
ENSMICG00000030494	-	58	90.411	ENSPNYG00000021712	snrpf	86	90.411	Pundamilia_nyererei
ENSMICG00000030494	-	58	89.041	ENSPNAG00000019117	snrpf	86	89.041	Pygocentrus_nattereri
ENSMICG00000030494	-	60	93.333	ENSRNOG00000005556	Snrpf	87	93.333	Rattus_norvegicus
ENSMICG00000030494	-	60	90.667	ENSRBIG00000030414	-	87	90.667	Rhinopithecus_bieti
ENSMICG00000030494	-	60	90.667	ENSRROG00000021975	-	87	90.667	Rhinopithecus_roxellana
ENSMICG00000030494	-	56	53.521	YPR182W	SMX3	83	53.521	Saccharomyces_cerevisiae
ENSMICG00000030494	-	62	77.778	ENSSBOG00000027638	-	91	77.778	Saimiri_boliviensis_boliviensis
ENSMICG00000030494	-	60	93.333	ENSSBOG00000012868	-	87	93.333	Saimiri_boliviensis_boliviensis
ENSMICG00000030494	-	60	93.333	ENSSBOG00000036179	-	87	93.333	Saimiri_boliviensis_boliviensis
ENSMICG00000030494	-	60	80.000	ENSSBOG00000032297	-	86	80.000	Saimiri_boliviensis_boliviensis
ENSMICG00000030494	-	70	86.207	ENSSHAG00000012294	SNRPF	73	90.123	Sarcophilus_harrisii
ENSMICG00000030494	-	51	90.625	ENSSFOG00015021523	snrpf	96	90.625	Scleropages_formosus
ENSMICG00000030494	-	60	88.000	ENSSMAG00000005533	snrpf	86	88.000	Scophthalmus_maximus
ENSMICG00000030494	-	52	90.769	ENSSDUG00000016283	snrpf	77	90.769	Seriola_dumerili
ENSMICG00000030494	-	64	67.500	ENSSLDG00000003885	-	90	70.270	Seriola_lalandi_dorsalis
ENSMICG00000030494	-	60	89.333	ENSSLDG00000005119	snrpf	87	89.333	Seriola_lalandi_dorsalis
ENSMICG00000030494	-	58	93.151	ENSSPUG00000014590	-	86	93.151	Sphenodon_punctatus
ENSMICG00000030494	-	59	90.541	ENSSPAG00000003283	snrpf	84	90.541	Stegastes_partitus
ENSMICG00000030494	-	60	93.333	ENSSSCG00000000895	SNRPF	87	93.333	Sus_scrofa
ENSMICG00000030494	-	60	89.333	ENSTNIG00000012672	snrpf	87	89.333	Tetraodon_nigroviridis
ENSMICG00000030494	-	60	64.000	ENSTTRG00000006070	SNRPF	87	64.000	Tursiops_truncatus
ENSMICG00000030494	-	69	81.395	ENSUAMG00000001101	-	88	82.667	Ursus_americanus
ENSMICG00000030494	-	60	93.333	ENSUAMG00000008176	-	87	93.333	Ursus_americanus
ENSMICG00000030494	-	60	93.333	ENSUMAG00000003528	-	87	93.333	Ursus_maritimus
ENSMICG00000030494	-	60	82.667	ENSUMAG00000006177	-	88	82.667	Ursus_maritimus
ENSMICG00000030494	-	60	93.333	ENSVPAG00000008712	-	87	93.333	Vicugna_pacos
ENSMICG00000030494	-	62	85.897	ENSVVUG00000023821	-	96	85.333	Vulpes_vulpes
ENSMICG00000030494	-	59	68.421	ENSXETG00000021630	snrpf	87	68.421	Xenopus_tropicalis
ENSMICG00000030494	-	58	90.411	ENSXCOG00000013860	snrpf	84	90.411	Xiphophorus_couchianus
ENSMICG00000030494	-	58	90.411	ENSXMAG00000015448	snrpf	86	90.411	Xiphophorus_maculatus