EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000030551 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant-like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 4161 bases
Position: chr15:36699743-36703903
Accession: 105870296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000039707	RRM_1	PF00076.22	3e-25	1	1
ENSMICP00000026866	RRM_1	PF00076.22	5.7e-25	1	1
ENSMICP00000041914	RRM_1	PF00076.22	4.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000066609	-	1137	-	ENSMICP00000041914	378 (aa)	-	UPI000C2EC471
ENSMICT00000047595	-	1179	-	ENSMICP00000039707	392 (aa)	-	UPI000C2EA9C4
ENSMICT00000046556	-	1797	XM_012762861	ENSMICP00000026866	598 (aa)	XP_012618315	UPI000C2EC7DC

Gene Model

Click here to download ENSMICG00000030551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000030551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000030551	-	99	77.206	ENSMICG00000014121	CSTF2	99	63.994
ENSMICG00000030551	-	100	93.765	ENSMICG00000000867	-	100	90.852
ENSMICG00000030551	-	50	38.235	ENSMICG00000001558	ELAVL2	67	35.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000030551	-	100	89.928	ENSG00000177613	CSTF2T	100	87.402	Homo_sapiens
ENSMICG00000030551	-	100	89.242	ENSAMEG00000015766	CSTF2T	100	80.915	Ailuropoda_melanoleuca
ENSMICG00000030551	-	80	92.434	ENSANAG00000027508	-	91	92.434	Aotus_nancymaae
ENSMICG00000030551	-	100	90.024	ENSBTAG00000018406	CSTF2T	100	81.481	Bos_taurus
ENSMICG00000030551	-	80	85.479	ENSCJAG00000039083	-	94	85.479	Callithrix_jacchus
ENSMICG00000030551	-	78	94.539	ENSCJAG00000011554	-	95	94.539	Callithrix_jacchus
ENSMICG00000030551	-	100	78.061	ENSCAFG00000015567	CSTF2T	63	94.089	Canis_familiaris
ENSMICG00000030551	-	100	76.761	ENSCAFG00020026426	CSTF2T	100	76.031	Canis_lupus_dingo
ENSMICG00000030551	-	100	89.781	ENSCHIG00000016590	CSTF2T	80	87.154	Capra_hircus
ENSMICG00000030551	-	100	88.599	ENSTSYG00000007750	CSTF2T	94	93.174	Carlito_syrichta
ENSMICG00000030551	-	100	83.409	ENSCPOG00000004195	CSTF2T	100	81.510	Cavia_porcellus
ENSMICG00000030551	-	80	93.092	ENSCCAG00000020816	-	89	93.092	Cebus_capucinus
ENSMICG00000030551	-	79	93.046	ENSCATG00000041868	-	96	93.046	Cercocebus_atys
ENSMICG00000030551	-	100	82.993	ENSCLAG00000017916	CSTF2T	100	81.288	Chinchilla_lanigera
ENSMICG00000030551	-	100	89.549	ENSCSAG00000018437	CSTF2T	100	87.559	Chlorocebus_sabaeus
ENSMICG00000030551	-	60	97.863	ENSCHOG00000011888	-	68	93.333	Choloepus_hoffmanni
ENSMICG00000030551	-	79	93.399	ENSCANG00000005843	-	95	93.399	Colobus_angolensis_palliatus
ENSMICG00000030551	-	100	84.087	ENSCGRG00001003222	Cstf2t	100	79.531	Cricetulus_griseus_chok1gshd
ENSMICG00000030551	-	100	85.400	ENSCGRG00000008682	Cstf2t	100	81.447	Cricetulus_griseus_crigri
ENSMICG00000030551	-	59	80.591	ENSCSEG00000002596	-	96	82.500	Cynoglossus_semilaevis
ENSMICG00000030551	-	100	88.049	ENSDNOG00000003283	CSTF2T	100	85.714	Dasypus_novemcinctus
ENSMICG00000030551	-	100	87.589	ENSDORG00000011245	Cstf2t	100	82.629	Dipodomys_ordii
ENSMICG00000030551	-	94	49.465	ENSEBUG00000014295	CSTF2T	60	79.245	Eptatretus_burgeri
ENSMICG00000030551	-	100	89.487	ENSEASG00005012929	CSTF2T	100	83.596	Equus_asinus_asinus
ENSMICG00000030551	-	100	89.976	ENSECAG00000004701	CSTF2T	100	83.912	Equus_caballus
ENSMICG00000030551	-	77	89.848	ENSELUG00000004079	-	77	89.119	Esox_lucius
ENSMICG00000030551	-	100	88.193	ENSFCAG00000046300	CSTF2T	100	84.385	Felis_catus
ENSMICG00000030551	-	100	84.687	ENSFDAG00000021170	CSTF2T	100	84.961	Fukomys_damarensis
ENSMICG00000030551	-	100	90.408	ENSGGOG00000042388	-	98	94.966	Gorilla_gorilla
ENSMICG00000030551	-	100	90.408	ENSGGOG00000036416	-	98	94.966	Gorilla_gorilla
ENSMICG00000030551	-	100	83.834	ENSHGLG00000015478	CSTF2T	100	84.235	Heterocephalus_glaber_female
ENSMICG00000030551	-	100	83.834	ENSHGLG00100000336	CSTF2T	100	81.173	Heterocephalus_glaber_male
ENSMICG00000030551	-	100	87.066	ENSSTOG00000026303	CSTF2T	100	84.858	Ictidomys_tridecemlineatus
ENSMICG00000030551	-	53	99.515	ENSJJAG00000019881	Cstf2t	63	82.306	Jaculus_jaculus
ENSMICG00000030551	-	100	89.051	ENSLAFG00000002058	CSTF2T	100	77.445	Loxodonta_africana
ENSMICG00000030551	-	79	93.667	ENSMFAG00000042009	-	99	93.667	Macaca_fascicularis
ENSMICG00000030551	-	78	95.563	ENSMMUG00000042906	-	97	95.563	Macaca_mulatta
ENSMICG00000030551	-	79	93.667	ENSMNEG00000031410	-	99	93.667	Macaca_nemestrina
ENSMICG00000030551	-	100	83.912	ENSMAUG00000006359	Cstf2t	100	84.858	Mesocricetus_auratus
ENSMICG00000030551	-	100	83.805	ENSMOCG00000020428	Cstf2t	100	84.748	Microtus_ochrogaster
ENSMICG00000030551	-	80	83.111	ENSMALG00000008842	-	98	71.429	Monopterus_albus
ENSMICG00000030551	-	100	81.585	MGP_CAROLIEiJ_G0022872	Cstf2t	100	80.751	Mus_caroli
ENSMICG00000030551	-	100	82.051	ENSMUSG00000053536	Cstf2t	100	81.761	Mus_musculus
ENSMICG00000030551	-	100	81.193	MGP_PahariEiJ_G0014365	Cstf2t	100	79.784	Mus_pahari
ENSMICG00000030551	-	100	81.585	MGP_SPRETEiJ_G0023790	Cstf2t	100	80.811	Mus_spretus
ENSMICG00000030551	-	100	86.936	ENSMPUG00000020141	CSTF2T	100	83.754	Mustela_putorius_furo
ENSMICG00000030551	-	100	88.406	ENSMLUG00000011187	-	100	80.186	Myotis_lucifugus
ENSMICG00000030551	-	100	79.335	ENSMLUG00000027140	-	100	77.338	Myotis_lucifugus
ENSMICG00000030551	-	100	86.414	ENSNGAG00000003304	Cstf2t	100	83.570	Nannospalax_galili
ENSMICG00000030551	-	100	85.308	ENSNLEG00000012025	CSTF2T	100	83.542	Nomascus_leucogenys
ENSMICG00000030551	-	100	82.232	ENSODEG00000012386	CSTF2T	100	77.538	Octodon_degus
ENSMICG00000030551	-	100	88.509	ENSOCUG00000004647	-	89	83.858	Oryctolagus_cuniculus
ENSMICG00000030551	-	100	91.041	ENSOGAG00000014565	CSTF2T	100	84.858	Otolemur_garnettii
ENSMICG00000030551	-	100	89.538	ENSOARG00000013688	-	100	80.123	Ovis_aries
ENSMICG00000030551	-	100	89.538	ENSOARG00000019124	-	100	81.562	Ovis_aries
ENSMICG00000030551	-	79	92.131	ENSPPAG00000032242	-	99	92.131	Pan_paniscus
ENSMICG00000030551	-	100	88.620	ENSPPRG00000018659	CSTF2T	100	84.069	Panthera_pardus
ENSMICG00000030551	-	100	86.988	ENSPTIG00000021145	CSTF2T	100	81.073	Panthera_tigris_altaica
ENSMICG00000030551	-	79	92.131	ENSPTRG00000043097	-	99	92.131	Pan_troglodytes
ENSMICG00000030551	-	79	93.667	ENSPANG00000029734	-	99	93.667	Papio_anubis
ENSMICG00000030551	-	98	61.707	ENSPFOG00000016756	CSTF2T	94	66.765	Poecilia_formosa
ENSMICG00000030551	-	100	89.311	ENSPPYG00000002441	CSTF2T	100	84.844	Pongo_abelii
ENSMICG00000030551	-	100	85.919	ENSPCAG00000000046	CSTF2T	100	82.520	Procavia_capensis
ENSMICG00000030551	-	100	92.530	ENSPCOG00000010982	CSTF2T	99	87.994	Propithecus_coquereli
ENSMICG00000030551	-	100	91.283	ENSPVAG00000006274	CSTF2T	100	83.123	Pteropus_vampyrus
ENSMICG00000030551	-	100	83.953	ENSRNOG00000050289	Cstf2t	100	80.938	Rattus_norvegicus
ENSMICG00000030551	-	100	91.127	ENSRBIG00000029324	CSTF2T	99	93.443	Rhinopithecus_bieti
ENSMICG00000030551	-	100	90.887	ENSRROG00000042507	CSTF2T	99	93.115	Rhinopithecus_roxellana
ENSMICG00000030551	-	100	89.448	ENSSBOG00000022638	CSTF2T	94	93.750	Saimiri_boliviensis_boliviensis
ENSMICG00000030551	-	80	83.111	ENSSDUG00000001049	-	97	74.286	Seriola_dumerili
ENSMICG00000030551	-	80	83.111	ENSSLDG00000010056	-	97	74.286	Seriola_lalandi_dorsalis
ENSMICG00000030551	-	81	93.802	ENSSARG00000002013	-	87	94.231	Sorex_araneus
ENSMICG00000030551	-	77	90.355	ENSSPAG00000009247	-	96	74.627	Stegastes_partitus
ENSMICG00000030551	-	100	89.448	ENSSSCG00000010430	CSTF2T	100	84.069	Sus_scrofa
ENSMICG00000030551	-	97	64.824	ENSTRUG00000004323	-	75	62.530	Takifugu_rubripes
ENSMICG00000030551	-	100	73.344	ENSTBEG00000014379	CSTF2T	100	73.344	Tupaia_belangeri
ENSMICG00000030551	-	100	89.538	ENSTTRG00000003341	CSTF2T	100	83.281	Tursiops_truncatus
ENSMICG00000030551	-	100	89.398	ENSUMAG00000011141	CSTF2T	100	81.944	Ursus_maritimus
ENSMICG00000030551	-	72	78.397	ENSVVUG00000002575	CSTF2T	65	96.117	Vulpes_vulpes