EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000030685 (Gene tree)
Gene ID: 105879711
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 161816 bases
Position: chr17:19508627-19670442
Accession: 105879711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000001726	Ago_hook	PF10427.9	1.7e-19	1	1
ENSMICP00000043554	Ago_hook	PF10427.9	1.9e-19	1	1
ENSMICP00000040919	Ago_hook	PF10427.9	3.5e-19	1	1
ENSMICP00000031483	Ago_hook	PF10427.9	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000001893	TNRC6A-204	5820	XM_012780148	ENSMICP00000001726	1939 (aa)	XP_012635602	UPI000C2EBF8A
ENSMICT00000031113	TNRC6A-202	10891	XM_012780141	ENSMICP00000031483	1962 (aa)	XP_012635595	UPI000642A317
ENSMICT00000069293	TNRC6A-201	10846	XM_012780140	ENSMICP00000040919	1971 (aa)	XP_012635594	UPI0006429F3C
ENSMICT00000070727	TNRC6A-203	10727	XM_020281412	ENSMICP00000043554	1913 (aa)	XP_020137001	UPI00085B314A
ENSMICT00000042525	TNRC6A-205	7803	-	ENSMICP00000019713	629 (aa)	-	UPI00085B3717

Gene Model

Click here to download ENSMICG00000030685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000030685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000030685	TNRC6A	97	40.382	ENSMICG00000014056	TNRC6B	95	45.399
ENSMICG00000030685	TNRC6A	98	41.768	ENSMICG00000003952	TNRC6C	99	44.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000030685	TNRC6A	100	97.910	ENSG00000090905	TNRC6A	100	97.910	Homo_sapiens
ENSMICG00000030685	TNRC6A	99	96.447	ENSAMEG00000009333	TNRC6A	100	96.710	Ailuropoda_melanoleuca
ENSMICG00000030685	TNRC6A	98	82.083	ENSAPLG00000009978	TNRC6A	100	82.135	Anas_platyrhynchos
ENSMICG00000030685	TNRC6A	100	54.466	ENSACAG00000011857	TNRC6A	100	56.448	Anolis_carolinensis
ENSMICG00000030685	TNRC6A	100	97.604	ENSANAG00000025252	TNRC6A	100	97.604	Aotus_nancymaae
ENSMICG00000030685	TNRC6A	91	56.773	ENSAMXG00000019919	tnrc6a	99	57.426	Astyanax_mexicanus
ENSMICG00000030685	TNRC6A	100	95.557	ENSBTAG00000017999	TNRC6A	100	95.295	Bos_taurus
ENSMICG00000030685	TNRC6A	100	97.510	ENSCJAG00000020677	TNRC6A	100	97.510	Callithrix_jacchus
ENSMICG00000030685	TNRC6A	99	96.658	ENSCAFG00000017531	TNRC6A	100	96.607	Canis_familiaris
ENSMICG00000030685	TNRC6A	99	95.393	ENSCAFG00020021160	TNRC6A	99	95.393	Canis_lupus_dingo
ENSMICG00000030685	TNRC6A	100	95.609	ENSCHIG00000019448	TNRC6A	100	96.273	Capra_hircus
ENSMICG00000030685	TNRC6A	100	97.604	ENSTSYG00000012711	TNRC6A	100	97.604	Carlito_syrichta
ENSMICG00000030685	TNRC6A	99	96.651	ENSCPOG00000036684	TNRC6A	100	96.651	Cavia_porcellus
ENSMICG00000030685	TNRC6A	100	97.808	ENSCCAG00000033664	TNRC6A	100	97.808	Cebus_capucinus
ENSMICG00000030685	TNRC6A	99	97.740	ENSCATG00000019284	TNRC6A	99	97.740	Cercocebus_atys
ENSMICG00000030685	TNRC6A	100	92.159	ENSCLAG00000010217	TNRC6A	100	92.211	Chinchilla_lanigera
ENSMICG00000030685	TNRC6A	100	97.910	ENSCSAG00000006561	TNRC6A	100	97.910	Chlorocebus_sabaeus
ENSMICG00000030685	TNRC6A	95	92.580	ENSCHOG00000009374	TNRC6A	95	92.580	Choloepus_hoffmanni
ENSMICG00000030685	TNRC6A	90	82.448	ENSCPBG00000001881	TNRC6A	99	82.448	Chrysemys_picta_bellii
ENSMICG00000030685	TNRC6A	100	97.808	ENSCANG00000041549	TNRC6A	100	97.808	Colobus_angolensis_palliatus
ENSMICG00000030685	TNRC6A	100	95.350	ENSCGRG00001015021	Tnrc6a	100	95.455	Cricetulus_griseus_chok1gshd
ENSMICG00000030685	TNRC6A	99	94.404	ENSCGRG00000013351	Tnrc6a	99	94.299	Cricetulus_griseus_crigri
ENSMICG00000030685	TNRC6A	91	56.638	ENSDARG00000079688	tnrc6a	99	57.127	Danio_rerio
ENSMICG00000030685	TNRC6A	99	94.330	ENSDNOG00000013989	TNRC6A	100	94.381	Dasypus_novemcinctus
ENSMICG00000030685	TNRC6A	99	86.050	ENSETEG00000014658	TNRC6A	99	86.311	Echinops_telfairi
ENSMICG00000030685	TNRC6A	100	96.994	ENSEASG00005017693	TNRC6A	100	97.510	Equus_asinus_asinus
ENSMICG00000030685	TNRC6A	100	96.994	ENSECAG00000025056	TNRC6A	100	97.510	Equus_caballus
ENSMICG00000030685	TNRC6A	99	90.078	ENSEEUG00000004530	TNRC6A	99	90.339	Erinaceus_europaeus
ENSMICG00000030685	TNRC6A	100	95.413	ENSFCAG00000025236	TNRC6A	100	95.464	Felis_catus
ENSMICG00000030685	TNRC6A	99	79.330	ENSFALG00000003757	TNRC6A	99	80.080	Ficedula_albicollis
ENSMICG00000030685	TNRC6A	90	82.824	ENSGALG00000006068	TNRC6A	99	83.228	Gallus_gallus
ENSMICG00000030685	TNRC6A	90	81.656	ENSGAGG00000023209	TNRC6A	99	81.944	Gopherus_agassizii
ENSMICG00000030685	TNRC6A	99	97.738	ENSGGOG00000005137	TNRC6A	99	97.738	Gorilla_gorilla
ENSMICG00000030685	TNRC6A	100	72.727	ENSHGLG00000007368	-	99	72.466	Heterocephalus_glaber_female
ENSMICG00000030685	TNRC6A	99	94.494	ENSHGLG00000012474	-	100	94.494	Heterocephalus_glaber_female
ENSMICG00000030685	TNRC6A	99	94.022	ENSHGLG00100012496	-	100	94.022	Heterocephalus_glaber_male
ENSMICG00000030685	TNRC6A	100	96.030	ENSSTOG00000023394	TNRC6A	100	96.030	Ictidomys_tridecemlineatus
ENSMICG00000030685	TNRC6A	98	69.691	ENSLACG00000006277	TNRC6A	100	70.412	Latimeria_chalumnae
ENSMICG00000030685	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSMICG00000030685	TNRC6A	98	95.608	ENSLAFG00000004209	TNRC6A	100	95.608	Loxodonta_africana
ENSMICG00000030685	TNRC6A	98	96.670	ENSMFAG00000003824	TNRC6A	99	96.722	Macaca_fascicularis
ENSMICG00000030685	TNRC6A	100	97.808	ENSMMUG00000020428	TNRC6A	100	97.808	Macaca_mulatta
ENSMICG00000030685	TNRC6A	100	97.713	ENSMNEG00000034854	TNRC6A	100	97.713	Macaca_nemestrina
ENSMICG00000030685	TNRC6A	99	95.326	ENSMLEG00000042737	TNRC6A	98	95.326	Mandrillus_leucophaeus
ENSMICG00000030685	TNRC6A	99	80.456	ENSMGAG00000006455	TNRC6A	99	80.688	Meleagris_gallopavo
ENSMICG00000030685	TNRC6A	100	95.037	ENSMAUG00000012750	Tnrc6a	100	95.141	Mesocricetus_auratus
ENSMICG00000030685	TNRC6A	100	95.191	ENSMOCG00000000152	Tnrc6a	100	95.034	Microtus_ochrogaster
ENSMICG00000030685	TNRC6A	99	82.101	ENSMODG00000016348	TNRC6A	99	82.152	Monodelphis_domestica
ENSMICG00000030685	TNRC6A	99	93.671	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	95.139	Mus_caroli
ENSMICG00000030685	TNRC6A	100	94.302	ENSMUSG00000052707	Tnrc6a	99	95.568	Mus_musculus
ENSMICG00000030685	TNRC6A	99	94.518	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.854	Mus_pahari
ENSMICG00000030685	TNRC6A	100	94.292	MGP_SPRETEiJ_G0031539	Tnrc6a	100	95.568	Mus_spretus
ENSMICG00000030685	TNRC6A	97	84.442	ENSMPUG00000012324	TNRC6A	100	84.281	Mustela_putorius_furo
ENSMICG00000030685	TNRC6A	98	93.344	ENSMLUG00000002701	TNRC6A	100	93.449	Myotis_lucifugus
ENSMICG00000030685	TNRC6A	99	96.391	ENSNGAG00000020702	Tnrc6a	100	96.391	Nannospalax_galili
ENSMICG00000030685	TNRC6A	98	95.370	ENSNLEG00000011851	TNRC6A	99	95.370	Nomascus_leucogenys
ENSMICG00000030685	TNRC6A	77	89.369	ENSMEUG00000015959	-	77	89.369	Notamacropus_eugenii
ENSMICG00000030685	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSMICG00000030685	TNRC6A	99	89.873	ENSODEG00000012802	TNRC6A	99	90.032	Octodon_degus
ENSMICG00000030685	TNRC6A	88	83.314	ENSOANG00000007672	TNRC6A	99	83.314	Ornithorhynchus_anatinus
ENSMICG00000030685	TNRC6A	98	93.609	ENSOCUG00000004325	TNRC6A	100	93.662	Oryctolagus_cuniculus
ENSMICG00000030685	TNRC6A	99	97.843	ENSOGAG00000006666	TNRC6A	100	97.843	Otolemur_garnettii
ENSMICG00000030685	TNRC6A	99	94.775	ENSOARG00000017950	TNRC6A	98	96.622	Ovis_aries
ENSMICG00000030685	TNRC6A	99	97.846	ENSPPAG00000028379	TNRC6A	100	97.812	Pan_paniscus
ENSMICG00000030685	TNRC6A	100	95.413	ENSPPRG00000005861	TNRC6A	100	95.464	Panthera_pardus
ENSMICG00000030685	TNRC6A	99	94.758	ENSPTIG00000006346	TNRC6A	99	94.810	Panthera_tigris_altaica
ENSMICG00000030685	TNRC6A	99	96.901	ENSPTRG00000007898	TNRC6A	99	97.448	Pan_troglodytes
ENSMICG00000030685	TNRC6A	100	95.674	ENSPANG00000018523	TNRC6A	100	95.674	Papio_anubis
ENSMICG00000030685	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSMICG00000030685	TNRC6A	77	78.176	ENSPSIG00000003965	TNRC6A	100	78.176	Pelodiscus_sinensis
ENSMICG00000030685	TNRC6A	100	94.668	ENSPEMG00000016318	Tnrc6a	100	94.924	Peromyscus_maniculatus_bairdii
ENSMICG00000030685	TNRC6A	99	83.760	ENSPCIG00000012106	TNRC6A	100	84.073	Phascolarctos_cinereus
ENSMICG00000030685	TNRC6A	99	97.329	ENSPPYG00000007202	TNRC6A	100	97.299	Pongo_abelii
ENSMICG00000030685	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSMICG00000030685	TNRC6A	100	97.197	ENSPCOG00000010134	TNRC6A	100	97.197	Propithecus_coquereli
ENSMICG00000030685	TNRC6A	89	70.898	ENSPVAG00000012066	TNRC6A	99	70.843	Pteropus_vampyrus
ENSMICG00000030685	TNRC6A	100	94.836	ENSRNOG00000024737	Tnrc6a	100	94.836	Rattus_norvegicus
ENSMICG00000030685	TNRC6A	99	97.778	ENSRBIG00000014222	TNRC6A	100	97.778	Rhinopithecus_bieti
ENSMICG00000030685	TNRC6A	100	97.655	ENSRROG00000032360	TNRC6A	100	97.655	Rhinopithecus_roxellana
ENSMICG00000030685	TNRC6A	99	96.546	ENSSBOG00000036197	TNRC6A	100	98.303	Saimiri_boliviensis_boliviensis
ENSMICG00000030685	TNRC6A	90	84.217	ENSSHAG00000008811	TNRC6A	99	84.672	Sarcophilus_harrisii
ENSMICG00000030685	TNRC6A	88	67.515	ENSSFOG00015008920	tnrc6a	99	64.962	Scleropages_formosus
ENSMICG00000030685	TNRC6A	73	83.696	ENSSARG00000002479	TNRC6A	90	84.058	Sorex_araneus
ENSMICG00000030685	TNRC6A	91	78.835	ENSSPUG00000010525	TNRC6A	100	78.835	Sphenodon_punctatus
ENSMICG00000030685	TNRC6A	100	96.868	ENSSSCG00000038870	TNRC6A	100	98.072	Sus_scrofa
ENSMICG00000030685	TNRC6A	99	79.875	ENSTGUG00000006142	TNRC6A	100	80.499	Taeniopygia_guttata
ENSMICG00000030685	TNRC6A	99	95.246	ENSTBEG00000014965	TNRC6A	100	95.509	Tupaia_belangeri
ENSMICG00000030685	TNRC6A	94	98.382	ENSTTRG00000002008	TNRC6A	93	98.382	Tursiops_truncatus
ENSMICG00000030685	TNRC6A	79	96.085	ENSUAMG00000006656	-	93	96.085	Ursus_americanus
ENSMICG00000030685	TNRC6A	99	95.938	ENSUMAG00000008274	TNRC6A	100	97.892	Ursus_maritimus
ENSMICG00000030685	TNRC6A	57	85.714	ENSVPAG00000010764	-	57	85.714	Vicugna_pacos
ENSMICG00000030685	TNRC6A	100	96.702	ENSVVUG00000005380	TNRC6A	100	97.339	Vulpes_vulpes
ENSMICG00000030685	TNRC6A	95	66.004	ENSXETG00000030437	TNRC6A	99	66.236	Xenopus_tropicalis