EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000030865 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 5813 bases
Position: chr17:59335976-59341788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000032875	THUMP	PF02926.17	1.3e-14	1	1
ENSMICP00000034678	THUMP	PF02926.17	4.8e-13	1	1
ENSMICP00000047205	THUMP	PF02926.17	4.8e-13	1	1
ENSMICP00000017193	THUMP	PF02926.17	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000061460	-	966	-	ENSMICP00000047205	321 (aa)	-	UPI000C2ED335
ENSMICT00000030203	-	966	-	ENSMICP00000032875	321 (aa)	-	UPI000C2EB77C
ENSMICT00000048409	-	966	-	ENSMICP00000034678	321 (aa)	-	UPI000C2ECE2D
ENSMICT00000035658	-	966	-	ENSMICP00000017193	321 (aa)	-	UPI000C2ECB3B

Gene Model

Click here to download ENSMICG00000030865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000030865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000030865	-	96	78.000	ENSMICG00000038483	-	99	78.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000030865	-	96	72.286	ENSG00000066654	THUMPD1	99	72.286	Homo_sapiens
ENSMICG00000030865	-	64	50.673	ENSAPOG00000008440	thumpd1	73	51.339	Acanthochromis_polyacanthus
ENSMICG00000030865	-	96	70.904	ENSAMEG00000006257	THUMPD1	98	70.904	Ailuropoda_melanoleuca
ENSMICG00000030865	-	61	51.163	ENSACIG00000024395	thumpd1	79	46.038	Amphilophus_citrinellus
ENSMICG00000030865	-	59	51.659	ENSAOCG00000003509	thumpd1	64	53.555	Amphiprion_ocellaris
ENSMICG00000030865	-	59	51.659	ENSAPEG00000010515	thumpd1	65	53.555	Amphiprion_percula
ENSMICG00000030865	-	59	53.883	ENSATEG00000004737	thumpd1	65	53.883	Anabas_testudineus
ENSMICG00000030865	-	70	61.905	ENSAPLG00000015259	THUMPD1	88	63.095	Anas_platyrhynchos
ENSMICG00000030865	-	73	53.846	ENSACAG00000009625	-	87	56.537	Anolis_carolinensis
ENSMICG00000030865	-	94	61.562	ENSANAG00000027311	-	99	60.947	Aotus_nancymaae
ENSMICG00000030865	-	96	71.429	ENSANAG00000026882	-	99	71.429	Aotus_nancymaae
ENSMICG00000030865	-	96	60.423	ENSANAG00000027040	-	99	60.423	Aotus_nancymaae
ENSMICG00000030865	-	71	46.484	ENSACLG00000004830	thumpd1	67	52.273	Astatotilapia_calliptera
ENSMICG00000030865	-	62	56.221	ENSAMXG00000012356	thumpd1	65	57.277	Astyanax_mexicanus
ENSMICG00000030865	-	96	71.875	ENSBTAG00000047673	THUMPD1	99	71.875	Bos_taurus
ENSMICG00000030865	-	94	72.222	ENSCJAG00000009499	THUMPD1	99	71.347	Callithrix_jacchus
ENSMICG00000030865	-	96	70.621	ENSCAFG00000017985	THUMPD1	98	70.621	Canis_familiaris
ENSMICG00000030865	-	96	70.621	ENSCAFG00020021861	THUMPD1	98	70.621	Canis_lupus_dingo
ENSMICG00000030865	-	96	70.739	ENSCHIG00000010134	THUMPD1	98	70.739	Capra_hircus
ENSMICG00000030865	-	96	71.143	ENSTSYG00000011537	THUMPD1	99	71.143	Carlito_syrichta
ENSMICG00000030865	-	91	67.674	ENSCPOG00000023684	-	99	65.527	Cavia_porcellus
ENSMICG00000030865	-	91	67.674	ENSCPOG00000008919	-	99	65.527	Cavia_porcellus
ENSMICG00000030865	-	96	64.857	ENSCCAG00000019379	-	85	65.043	Cebus_capucinus
ENSMICG00000030865	-	96	71.264	ENSCCAG00000030205	THUMPD1	99	71.143	Cebus_capucinus
ENSMICG00000030865	-	96	61.891	ENSCATG00000020844	-	99	61.538	Cercocebus_atys
ENSMICG00000030865	-	96	72.286	ENSCATG00000040309	THUMPD1	99	72.286	Cercocebus_atys
ENSMICG00000030865	-	96	67.529	ENSCLAG00000016508	THUMPD1	99	67.143	Chinchilla_lanigera
ENSMICG00000030865	-	96	57.627	ENSCSAG00000009860	-	79	57.627	Chlorocebus_sabaeus
ENSMICG00000030865	-	96	72.286	ENSCSAG00000007610	THUMPD1	99	72.286	Chlorocebus_sabaeus
ENSMICG00000030865	-	96	67.232	ENSCHOG00000005587	THUMPD1	99	67.232	Choloepus_hoffmanni
ENSMICG00000030865	-	60	72.857	ENSCPBG00000019055	THUMPD1	60	72.857	Chrysemys_picta_bellii
ENSMICG00000030865	-	81	79.422	ENSCANG00000038770	THUMPD1	92	79.783	Colobus_angolensis_palliatus
ENSMICG00000030865	-	85	70.690	ENSCANG00000035822	-	94	71.034	Colobus_angolensis_palliatus
ENSMICG00000030865	-	96	66.292	ENSCGRG00001014829	Thumpd1	99	66.292	Cricetulus_griseus_chok1gshd
ENSMICG00000030865	-	90	69.909	ENSCGRG00000000060	Thumpd1	93	69.909	Cricetulus_griseus_crigri
ENSMICG00000030865	-	65	50.220	ENSCSEG00000002041	thumpd1	73	50.220	Cynoglossus_semilaevis
ENSMICG00000030865	-	67	51.282	ENSCVAG00000014960	thumpd1	72	51.282	Cyprinodon_variegatus
ENSMICG00000030865	-	72	47.082	ENSDARG00000100264	thumpd1	74	47.082	Danio_rerio
ENSMICG00000030865	-	96	70.621	ENSDNOG00000043510	THUMPD1	99	70.621	Dasypus_novemcinctus
ENSMICG00000030865	-	91	67.365	ENSDORG00000028216	Thumpd1	94	67.665	Dipodomys_ordii
ENSMICG00000030865	-	91	62.985	ENSETEG00000002763	THUMPD1	78	62.985	Echinops_telfairi
ENSMICG00000030865	-	58	37.333	ENSEBUG00000011011	THUMPD1	65	37.395	Eptatretus_burgeri
ENSMICG00000030865	-	54	72.449	ENSEASG00005017428	-	99	72.449	Equus_asinus_asinus
ENSMICG00000030865	-	96	69.492	ENSECAG00000005354	THUMPD1	99	69.492	Equus_caballus
ENSMICG00000030865	-	96	65.546	ENSEEUG00000011256	THUMPD1	86	65.546	Erinaceus_europaeus
ENSMICG00000030865	-	96	70.339	ENSFCAG00000039296	THUMPD1	99	70.339	Felis_catus
ENSMICG00000030865	-	62	68.037	ENSFALG00000014029	THUMPD1	79	69.406	Ficedula_albicollis
ENSMICG00000030865	-	59	50.718	ENSFHEG00000013319	thumpd1	60	51.675	Fundulus_heteroclitus
ENSMICG00000030865	-	59	56.039	ENSGMOG00000003369	thumpd1	65	56.039	Gadus_morhua
ENSMICG00000030865	-	54	58.854	ENSGALG00000031384	-	79	58.854	Gallus_gallus
ENSMICG00000030865	-	59	53.365	ENSGAFG00000011000	thumpd1	65	53.846	Gambusia_affinis
ENSMICG00000030865	-	59	54.854	ENSGACG00000019511	thumpd1	63	54.854	Gasterosteus_aculeatus
ENSMICG00000030865	-	60	71.905	ENSGAGG00000008225	THUMPD1	66	71.564	Gopherus_agassizii
ENSMICG00000030865	-	96	72.286	ENSGGOG00000005231	-	79	72.286	Gorilla_gorilla
ENSMICG00000030865	-	85	69.818	ENSGGOG00000043232	-	87	69.818	Gorilla_gorilla
ENSMICG00000030865	-	71	46.484	ENSHBUG00000017996	thumpd1	67	51.818	Haplochromis_burtoni
ENSMICG00000030865	-	61	61.215	ENSHGLG00000000952	-	100	61.215	Heterocephalus_glaber_female
ENSMICG00000030865	-	96	67.806	ENSHGLG00000011001	-	99	67.806	Heterocephalus_glaber_female
ENSMICG00000030865	-	96	68.376	ENSHGLG00100016023	THUMPD1	99	68.376	Heterocephalus_glaber_male
ENSMICG00000030865	-	61	61.215	ENSHGLG00100010577	-	100	61.215	Heterocephalus_glaber_male
ENSMICG00000030865	-	68	47.458	ENSIPUG00000012500	thumpd1	54	47.458	Ictalurus_punctatus
ENSMICG00000030865	-	95	69.914	ENSSTOG00000007011	THUMPD1	99	69.914	Ictidomys_tridecemlineatus
ENSMICG00000030865	-	96	67.241	ENSJJAG00000004295	-	99	67.143	Jaculus_jaculus
ENSMICG00000030865	-	70	41.985	ENSKMAG00000009545	thumpd1	64	42.529	Kryptolebias_marmoratus
ENSMICG00000030865	-	67	50.840	ENSLBEG00000009349	thumpd1	73	50.840	Labrus_bergylta
ENSMICG00000030865	-	60	57.563	ENSLACG00000005833	THUMPD1	66	57.563	Latimeria_chalumnae
ENSMICG00000030865	-	63	54.505	ENSLOCG00000000854	thumpd1	71	55.405	Lepisosteus_oculatus
ENSMICG00000030865	-	95	67.330	ENSLAFG00000025838	THUMPD1	99	67.042	Loxodonta_africana
ENSMICG00000030865	-	85	66.553	ENSMFAG00000041474	-	94	66.894	Macaca_fascicularis
ENSMICG00000030865	-	96	72.286	ENSMFAG00000036996	THUMPD1	99	72.286	Macaca_fascicularis
ENSMICG00000030865	-	85	65.986	ENSMMUG00000038414	-	94	66.327	Macaca_mulatta
ENSMICG00000030865	-	96	72.286	ENSMMUG00000004225	THUMPD1	99	72.286	Macaca_mulatta
ENSMICG00000030865	-	85	66.212	ENSMNEG00000038856	-	94	66.553	Macaca_nemestrina
ENSMICG00000030865	-	96	72.286	ENSMNEG00000020726	THUMPD1	99	72.286	Macaca_nemestrina
ENSMICG00000030865	-	85	66.212	ENSMLEG00000030012	-	94	66.553	Mandrillus_leucophaeus
ENSMICG00000030865	-	96	72.000	ENSMLEG00000036436	THUMPD1	99	72.000	Mandrillus_leucophaeus
ENSMICG00000030865	-	59	54.589	ENSMAMG00000006858	thumpd1	63	54.589	Mastacembelus_armatus
ENSMICG00000030865	-	71	46.484	ENSMZEG00005013693	thumpd1	67	51.818	Maylandia_zebra
ENSMICG00000030865	-	53	72.193	ENSMGAG00000010340	THUMPD1	91	72.193	Meleagris_gallopavo
ENSMICG00000030865	-	90	69.909	ENSMAUG00000013306	Thumpd1	93	69.909	Mesocricetus_auratus
ENSMICG00000030865	-	96	68.000	ENSMOCG00000003447	Thumpd1	99	68.000	Microtus_ochrogaster
ENSMICG00000030865	-	76	44.528	ENSMMOG00000011323	thumpd1	78	44.528	Mola_mola
ENSMICG00000030865	-	85	64.120	ENSMODG00000024776	-	96	59.943	Monodelphis_domestica
ENSMICG00000030865	-	95	59.701	ENSMODG00000006971	-	96	59.384	Monodelphis_domestica
ENSMICG00000030865	-	59	53.140	ENSMALG00000019522	thumpd1	82	46.743	Monopterus_albus
ENSMICG00000030865	-	90	68.389	MGP_CAROLIEiJ_G0030382	Thumpd1	93	68.389	Mus_caroli
ENSMICG00000030865	-	90	68.997	ENSMUSG00000030942	Thumpd1	93	68.997	Mus_musculus
ENSMICG00000030865	-	90	67.674	MGP_PahariEiJ_G0013593	Thumpd1	93	67.674	Mus_pahari
ENSMICG00000030865	-	97	68.373	ENSMLUG00000010547	THUMPD1	91	68.373	Myotis_lucifugus
ENSMICG00000030865	-	96	68.571	ENSNGAG00000018643	Thumpd1	99	68.571	Nannospalax_galili
ENSMICG00000030865	-	71	46.484	ENSNBRG00000006987	thumpd1	62	51.818	Neolamprologus_brichardi
ENSMICG00000030865	-	96	71.552	ENSNLEG00000012369	THUMPD1	99	71.429	Nomascus_leucogenys
ENSMICG00000030865	-	91	53.636	ENSOPRG00000011342	THUMPD1	80	53.636	Ochotona_princeps
ENSMICG00000030865	-	95	65.805	ENSODEG00000012360	THUMPD1	98	65.805	Octodon_degus
ENSMICG00000030865	-	71	46.484	ENSONIG00000000146	thumpd1	87	47.656	Oreochromis_niloticus
ENSMICG00000030865	-	86	58.589	ENSOANG00000014297	THUMPD1	92	58.589	Ornithorhynchus_anatinus
ENSMICG00000030865	-	63	68.950	ENSOCUG00000025354	-	99	68.950	Oryctolagus_cuniculus
ENSMICG00000030865	-	95	69.364	ENSOCUG00000009895	-	98	69.364	Oryctolagus_cuniculus
ENSMICG00000030865	-	61	52.093	ENSORLG00000027557	thumpd1	69	52.093	Oryzias_latipes
ENSMICG00000030865	-	61	51.628	ENSORLG00020010206	thumpd1	68	51.628	Oryzias_latipes_hni
ENSMICG00000030865	-	61	51.628	ENSORLG00015009581	thumpd1	68	51.628	Oryzias_latipes_hsok
ENSMICG00000030865	-	70	48.178	ENSOMEG00000019361	thumpd1	83	45.091	Oryzias_melastigma
ENSMICG00000030865	-	96	72.857	ENSOGAG00000026723	THUMPD1	99	72.857	Otolemur_garnettii
ENSMICG00000030865	-	96	71.023	ENSOARG00000013107	THUMPD1	98	71.023	Ovis_aries
ENSMICG00000030865	-	85	72.727	ENSPPAG00000001653	-	90	72.727	Pan_paniscus
ENSMICG00000030865	-	96	71.714	ENSPPAG00000033818	-	79	71.714	Pan_paniscus
ENSMICG00000030865	-	96	71.186	ENSPPRG00000014118	-	99	71.186	Panthera_pardus
ENSMICG00000030865	-	96	70.339	ENSPTIG00000013856	-	99	70.339	Panthera_tigris_altaica
ENSMICG00000030865	-	96	71.429	ENSPTRG00000007848	THUMPD1	79	71.429	Pan_troglodytes
ENSMICG00000030865	-	85	72.364	ENSPTRG00000046073	-	88	72.364	Pan_troglodytes
ENSMICG00000030865	-	96	72.000	ENSPANG00000025507	THUMPD1	99	72.000	Papio_anubis
ENSMICG00000030865	-	85	66.212	ENSPANG00000034881	-	94	66.553	Papio_anubis
ENSMICG00000030865	-	64	54.955	ENSPKIG00000014491	thumpd1	69	54.955	Paramormyrops_kingsleyae
ENSMICG00000030865	-	60	71.905	ENSPSIG00000012430	THUMPD1	72	71.905	Pelodiscus_sinensis
ENSMICG00000030865	-	59	53.110	ENSPMGG00000014479	thumpd1	74	53.110	Periophthalmus_magnuspinnatus
ENSMICG00000030865	-	67	58.974	ENSPEMG00000002608	-	99	59.829	Peromyscus_maniculatus_bairdii
ENSMICG00000030865	-	59	43.269	ENSPMAG00000001389	thumpd1	85	48.045	Petromyzon_marinus
ENSMICG00000030865	-	94	59.040	ENSPCIG00000029241	THUMPD1	71	59.167	Phascolarctos_cinereus
ENSMICG00000030865	-	74	47.348	ENSPFOG00000012649	thumpd1	82	47.727	Poecilia_formosa
ENSMICG00000030865	-	70	48.016	ENSPLAG00000000137	thumpd1	79	48.413	Poecilia_latipinna
ENSMICG00000030865	-	74	47.529	ENSPMEG00000007750	thumpd1	82	47.909	Poecilia_mexicana
ENSMICG00000030865	-	61	53.023	ENSPREG00000000144	thumpd1	73	53.241	Poecilia_reticulata
ENSMICG00000030865	-	80	79.710	ENSPPYG00000007160	-	99	79.710	Pongo_abelii
ENSMICG00000030865	-	80	72.242	ENSPCAG00000001534	THUMPD1	99	72.242	Procavia_capensis
ENSMICG00000030865	-	97	76.989	ENSPCOG00000024663	THUMPD1	99	76.989	Propithecus_coquereli
ENSMICG00000030865	-	96	62.712	ENSPVAG00000005659	-	99	62.360	Pteropus_vampyrus
ENSMICG00000030865	-	62	64.126	ENSPVAG00000003286	-	99	64.126	Pteropus_vampyrus
ENSMICG00000030865	-	71	46.484	ENSPNYG00000007061	thumpd1	66	51.818	Pundamilia_nyererei
ENSMICG00000030865	-	65	54.545	ENSPNAG00000024872	thumpd1	77	54.545	Pygocentrus_nattereri
ENSMICG00000030865	-	63	70.320	ENSRNOG00000014946	AABR07005588.1	99	70.320	Rattus_norvegicus
ENSMICG00000030865	-	96	72.000	ENSRBIG00000040752	THUMPD1	99	72.000	Rhinopithecus_bieti
ENSMICG00000030865	-	85	69.310	ENSRBIG00000040136	-	93	69.655	Rhinopithecus_bieti
ENSMICG00000030865	-	96	72.000	ENSRROG00000042189	THUMPD1	99	72.000	Rhinopithecus_roxellana
ENSMICG00000030865	-	85	69.310	ENSRROG00000045699	-	93	69.655	Rhinopithecus_roxellana
ENSMICG00000030865	-	96	71.552	ENSSBOG00000034246	THUMPD1	99	71.429	Saimiri_boliviensis_boliviensis
ENSMICG00000030865	-	85	64.474	ENSSHAG00000003853	THUMPD1	99	58.127	Sarcophilus_harrisii
ENSMICG00000030865	-	69	45.267	ENSSFOG00015007512	thumpd1	72	45.267	Scleropages_formosus
ENSMICG00000030865	-	59	52.427	ENSSMAG00000000723	thumpd1	63	52.427	Scophthalmus_maximus
ENSMICG00000030865	-	74	44.402	ENSSDUG00000014502	thumpd1	81	46.332	Seriola_dumerili
ENSMICG00000030865	-	74	44.788	ENSSLDG00000007694	thumpd1	81	46.718	Seriola_lalandi_dorsalis
ENSMICG00000030865	-	79	56.522	ENSSPUG00000005096	THUMPD1	93	55.380	Sphenodon_punctatus
ENSMICG00000030865	-	59	53.623	ENSSPAG00000006993	thumpd1	65	54.106	Stegastes_partitus
ENSMICG00000030865	-	96	70.538	ENSSSCG00000024748	THUMPD1	99	70.141	Sus_scrofa
ENSMICG00000030865	-	67	63.866	ENSTGUG00000009247	THUMPD1	86	65.126	Taeniopygia_guttata
ENSMICG00000030865	-	59	53.623	ENSTRUG00000015656	thumpd1	64	54.106	Takifugu_rubripes
ENSMICG00000030865	-	70	46.939	ENSTNIG00000001584	thumpd1	78	48.163	Tetraodon_nigroviridis
ENSMICG00000030865	-	97	69.516	ENSTBEG00000005252	THUMPD1	88	69.516	Tupaia_belangeri
ENSMICG00000030865	-	96	71.023	ENSTTRG00000016435	THUMPD1	99	70.621	Tursiops_truncatus
ENSMICG00000030865	-	63	66.667	ENSUAMG00000005779	-	99	67.117	Ursus_americanus
ENSMICG00000030865	-	96	68.750	ENSVPAG00000003422	THUMPD1	99	68.362	Vicugna_pacos
ENSMICG00000030865	-	96	71.186	ENSVVUG00000023241	THUMPD1	98	71.186	Vulpes_vulpes
ENSMICG00000030865	-	53	64.894	ENSXETG00000005539	thumpd1	77	60.090	Xenopus_tropicalis
ENSMICG00000030865	-	59	53.365	ENSXMAG00000026052	thumpd1	65	53.846	Xiphophorus_maculatus