EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000032109 (Gene tree)
Gene ID: 105864042
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 9908 bases
Position: chr2:104137706-104147613
Accession: 105864042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000032800	PRP38	PF03371.15	2.1e-57	1	1
ENSMICP00000024859	PRP38	PF03371.15	9.6e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000049563	PRPF38B-201	3114	XM_012751676	ENSMICP00000032800	544 (aa)	XP_012607130	UPI000643A82D
ENSMICT00000052755	PRPF38B-202	573	-	ENSMICP00000024859	190 (aa)	-	UPI00001A9CA1

Gene Model

Click here to download ENSMICG00000032109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000032109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000032109	PRPF38B	100	97.895	ENSCJAG00000002510	-	100	97.253	Callithrix_jacchus
ENSMICG00000032109	PRPF38B	80	94.253	ENSTSYG00000029817	PRPF38B	97	94.062	Carlito_syrichta
ENSMICG00000032109	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSMICG00000032109	PRPF38B	100	98.535	ENSCSAG00000001531	PRPF38B	100	98.535	Chlorocebus_sabaeus
ENSMICG00000032109	PRPF38B	100	100.000	ENSCANG00000027711	PRPF38B	100	100.000	Colobus_angolensis_palliatus
ENSMICG00000032109	PRPF38B	100	97.895	ENSLAFG00000017112	PRPF38B	100	97.436	Loxodonta_africana
ENSMICG00000032109	PRPF38B	100	100.000	ENSMMUG00000010155	PRPF38B	100	100.000	Macaca_mulatta
ENSMICG00000032109	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSMICG00000032109	PRPF38B	80	95.402	ENSODEG00000007646	PRPF38B	97	95.249	Octodon_degus
ENSMICG00000032109	PRPF38B	83	97.577	ENSOCUG00000027424	PRPF38B	100	97.577	Oryctolagus_cuniculus
ENSMICG00000032109	PRPF38B	100	97.985	ENSPPYG00000001092	PRPF38B	100	97.985	Pongo_abelii
ENSMICG00000032109	PRPF38B	100	100.000	ENSPCOG00000016051	PRPF38B	100	100.000	Propithecus_coquereli
ENSMICG00000032109	PRPF38B	100	100.000	ENSRBIG00000043351	PRPF38B	100	100.000	Rhinopithecus_bieti
ENSMICG00000032109	PRPF38B	100	100.000	ENSRROG00000029232	PRPF38B	100	100.000	Rhinopithecus_roxellana