EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000032307 (Gene tree)
Gene ID: 105859657
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 36546 bases
Position: chr17:4031628-4068173
Accession: 105859657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000046330	MMR_HSR1	PF01926.23	1.4e-08	1	1
ENSMICP00000028500	MMR_HSR1	PF01926.23	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000062944	SRL-202	1422	XM_012743638	ENSMICP00000046330	473 (aa)	XP_012599092	UPI00064302D9
ENSMICT00000027205	SRL-201	6495	XM_012743632	ENSMICP00000028500	833 (aa)	XP_012599086	UPI000642909F

Gene Model

Click here to download ENSMICG00000032307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000032307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000032307	SRL	82	32.564	ENSMICG00000005571	EHD2	68	32.812
ENSMICG00000032307	SRL	63	35.452	ENSMICG00000034027	EHD4	55	35.452
ENSMICG00000032307	SRL	78	33.604	ENSMICG00000043744	EHD3	67	33.604
ENSMICG00000032307	SRL	77	33.973	ENSMICG00000001239	EHD1	80	33.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000032307	SRL	100	95.772	ENSG00000185739	SRL	100	97.448	Homo_sapiens
ENSMICG00000032307	SRL	100	80.550	ENSAPOG00000018093	srl	99	83.447	Acanthochromis_polyacanthus
ENSMICG00000032307	SRL	93	77.149	ENSAPOG00000012432	SRL	98	75.785	Acanthochromis_polyacanthus
ENSMICG00000032307	SRL	97	96.522	ENSAMEG00000010862	SRL	100	68.825	Ailuropoda_melanoleuca
ENSMICG00000032307	SRL	96	82.340	ENSACIG00000015799	srl	100	82.340	Amphilophus_citrinellus
ENSMICG00000032307	SRL	93	75.792	ENSACIG00000015419	SRL	98	75.792	Amphilophus_citrinellus
ENSMICG00000032307	SRL	96	75.219	ENSAOCG00000017049	SRL	99	75.219	Amphiprion_ocellaris
ENSMICG00000032307	SRL	92	83.871	ENSAOCG00000007574	srl	100	83.871	Amphiprion_ocellaris
ENSMICG00000032307	SRL	100	80.761	ENSAPEG00000006911	srl	96	82.237	Amphiprion_percula
ENSMICG00000032307	SRL	96	71.648	ENSAPEG00000006533	SRL	99	71.648	Amphiprion_percula
ENSMICG00000032307	SRL	100	80.550	ENSATEG00000024315	srl	96	82.237	Anabas_testudineus
ENSMICG00000032307	SRL	93	74.066	ENSATEG00000009643	SRL	52	74.066	Anabas_testudineus
ENSMICG00000032307	SRL	99	86.335	ENSACAG00000016380	SRL	91	84.708	Anolis_carolinensis
ENSMICG00000032307	SRL	94	73.304	ENSACLG00000024674	SRL	55	75.000	Astatotilapia_calliptera
ENSMICG00000032307	SRL	98	81.290	ENSACLG00000027685	srl	98	82.444	Astatotilapia_calliptera
ENSMICG00000032307	SRL	99	81.144	ENSAMXG00000018789	srl	87	84.163	Astyanax_mexicanus
ENSMICG00000032307	SRL	88	77.349	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSMICG00000032307	SRL	96	95.165	ENSBTAG00000001078	SRL	99	74.793	Bos_taurus
ENSMICG00000032307	SRL	93	97.285	ENSCJAG00000019750	SRL	100	95.772	Callithrix_jacchus
ENSMICG00000032307	SRL	97	95.879	ENSCAFG00000019233	SRL	85	96.070	Canis_familiaris
ENSMICG00000032307	SRL	96	96.909	ENSCAFG00020025024	SRL	98	76.492	Canis_lupus_dingo
ENSMICG00000032307	SRL	99	94.206	ENSCHIG00000017927	SRL	98	74.244	Capra_hircus
ENSMICG00000032307	SRL	100	96.406	ENSTSYG00000007919	SRL	100	97.912	Carlito_syrichta
ENSMICG00000032307	SRL	97	96.061	ENSCPOG00000012643	SRL	96	96.053	Cavia_porcellus
ENSMICG00000032307	SRL	100	90.063	ENSCCAG00000032646	SRL	100	97.625	Cebus_capucinus
ENSMICG00000032307	SRL	100	95.983	ENSCATG00000032227	-	100	95.983	Cercocebus_atys
ENSMICG00000032307	SRL	97	96.061	ENSCLAG00000016242	SRL	96	96.053	Chinchilla_lanigera
ENSMICG00000032307	SRL	96	96.689	ENSCSAG00000009635	-	86	91.897	Chlorocebus_sabaeus
ENSMICG00000032307	SRL	81	98.182	ENSCHOG00000001618	SRL	88	98.182	Choloepus_hoffmanni
ENSMICG00000032307	SRL	96	94.041	ENSCPBG00000026371	SRL	96	89.224	Chrysemys_picta_bellii
ENSMICG00000032307	SRL	93	57.500	ENSCING00000005231	-	91	59.852	Ciona_intestinalis
ENSMICG00000032307	SRL	100	95.983	ENSCANG00000035872	SRL	100	97.448	Colobus_angolensis_palliatus
ENSMICG00000032307	SRL	96	96.689	ENSCGRG00001016630	Srl	96	96.491	Cricetulus_griseus_chok1gshd
ENSMICG00000032307	SRL	96	96.689	ENSCGRG00000005458	Srl	96	96.491	Cricetulus_griseus_crigri
ENSMICG00000032307	SRL	99	69.872	ENSCSEG00000011866	SRL	89	72.523	Cynoglossus_semilaevis
ENSMICG00000032307	SRL	100	80.550	ENSCSEG00000016151	srl	99	80.994	Cynoglossus_semilaevis
ENSMICG00000032307	SRL	100	80.761	ENSCVAG00000003513	srl	96	83.973	Cyprinodon_variegatus
ENSMICG00000032307	SRL	93	75.221	ENSCVAG00000022465	SRL	60	74.558	Cyprinodon_variegatus
ENSMICG00000032307	SRL	80	76.823	ENSDARG00000112959	CABZ01072309.1	100	76.823	Danio_rerio
ENSMICG00000032307	SRL	100	81.395	ENSDARG00000104587	srl	97	83.260	Danio_rerio
ENSMICG00000032307	SRL	95	96.231	ENSDNOG00000011643	SRL	100	76.207	Dasypus_novemcinctus
ENSMICG00000032307	SRL	97	95.624	ENSDORG00000014807	Srl	96	96.018	Dipodomys_ordii
ENSMICG00000032307	SRL	77	66.310	ENSEBUG00000015937	srl	88	68.678	Eptatretus_burgeri
ENSMICG00000032307	SRL	98	95.238	ENSEASG00005000942	SRL	99	74.914	Equus_asinus_asinus
ENSMICG00000032307	SRL	99	95.763	ENSECAG00000024219	SRL	99	95.763	Equus_caballus
ENSMICG00000032307	SRL	100	76.591	ENSELUG00000015616	srl	97	78.936	Esox_lucius
ENSMICG00000032307	SRL	100	95.560	ENSFCAG00000022075	SRL	100	95.560	Felis_catus
ENSMICG00000032307	SRL	96	90.929	ENSFALG00000004328	SRL	87	73.108	Ficedula_albicollis
ENSMICG00000032307	SRL	96	97.124	ENSFDAG00000006199	SRL	96	97.124	Fukomys_damarensis
ENSMICG00000032307	SRL	93	75.792	ENSFHEG00000011854	SRL	98	76.871	Fundulus_heteroclitus
ENSMICG00000032307	SRL	100	80.338	ENSFHEG00000011239	srl	96	82.844	Fundulus_heteroclitus
ENSMICG00000032307	SRL	93	80.574	ENSGMOG00000014954	srl	99	80.574	Gadus_morhua
ENSMICG00000032307	SRL	99	90.578	ENSGALG00000038884	SRL	96	91.150	Gallus_gallus
ENSMICG00000032307	SRL	100	80.550	ENSGAFG00000000010	srl	98	81.978	Gambusia_affinis
ENSMICG00000032307	SRL	93	76.697	ENSGAFG00000016984	SRL	98	76.697	Gambusia_affinis
ENSMICG00000032307	SRL	93	80.837	ENSGACG00000011332	srl	99	80.837	Gasterosteus_aculeatus
ENSMICG00000032307	SRL	100	95.560	ENSGGOG00000011312	-	100	95.560	Gorilla_gorilla
ENSMICG00000032307	SRL	98	81.290	ENSHBUG00000007581	srl	98	82.444	Haplochromis_burtoni
ENSMICG00000032307	SRL	94	73.085	ENSHBUG00000015710	SRL	61	68.687	Haplochromis_burtoni
ENSMICG00000032307	SRL	100	96.406	ENSHGLG00000015271	SRL	100	96.406	Heterocephalus_glaber_female
ENSMICG00000032307	SRL	100	96.406	ENSHGLG00100019378	SRL	100	96.406	Heterocephalus_glaber_male
ENSMICG00000032307	SRL	95	72.331	ENSHCOG00000001012	SRL	51	71.242	Hippocampus_comes
ENSMICG00000032307	SRL	99	80.384	ENSHCOG00000008687	srl	99	82.222	Hippocampus_comes
ENSMICG00000032307	SRL	100	79.493	ENSIPUG00000012513	srl	97	81.596	Ictalurus_punctatus
ENSMICG00000032307	SRL	92	69.495	ENSIPUG00000011609	SRL	95	68.349	Ictalurus_punctatus
ENSMICG00000032307	SRL	97	95.842	ENSSTOG00000021151	-	96	96.035	Ictidomys_tridecemlineatus
ENSMICG00000032307	SRL	100	94.715	ENSJJAG00000016400	Srl	100	94.715	Jaculus_jaculus
ENSMICG00000032307	SRL	93	76.644	ENSKMAG00000019537	SRL	100	76.644	Kryptolebias_marmoratus
ENSMICG00000032307	SRL	98	79.914	ENSKMAG00000014115	srl	93	85.273	Kryptolebias_marmoratus
ENSMICG00000032307	SRL	96	74.781	ENSLBEG00000013811	SRL	98	74.561	Labrus_bergylta
ENSMICG00000032307	SRL	100	80.973	ENSLBEG00000026643	srl	96	82.522	Labrus_bergylta
ENSMICG00000032307	SRL	96	85.651	ENSLACG00000002825	SRL	100	85.651	Latimeria_chalumnae
ENSMICG00000032307	SRL	99	83.547	ENSLOCG00000002644	srl	98	84.532	Lepisosteus_oculatus
ENSMICG00000032307	SRL	96	96.468	ENSLAFG00000006329	SRL	98	75.029	Loxodonta_africana
ENSMICG00000032307	SRL	91	97.448	ENSMFAG00000037383	SRL	100	97.448	Macaca_fascicularis
ENSMICG00000032307	SRL	98	95.455	ENSMNEG00000019236	-	96	96.468	Macaca_nemestrina
ENSMICG00000032307	SRL	100	88.584	ENSMLEG00000032156	SRL	100	88.584	Mandrillus_leucophaeus
ENSMICG00000032307	SRL	93	74.229	ENSMAMG00000013756	SRL	53	74.123	Mastacembelus_armatus
ENSMICG00000032307	SRL	94	83.521	ENSMAMG00000023322	srl	94	83.521	Mastacembelus_armatus
ENSMICG00000032307	SRL	98	81.290	ENSMZEG00005004548	srl	98	82.444	Maylandia_zebra
ENSMICG00000032307	SRL	94	73.304	ENSMZEG00005004010	SRL	62	68.889	Maylandia_zebra
ENSMICG00000032307	SRL	96	89.912	ENSMGAG00000009342	SRL	95	92.308	Meleagris_gallopavo
ENSMICG00000032307	SRL	100	94.926	ENSMOCG00000008208	Srl	96	95.833	Microtus_ochrogaster
ENSMICG00000032307	SRL	94	82.844	ENSMMOG00000013970	srl	98	82.844	Mola_mola
ENSMICG00000032307	SRL	93	73.187	ENSMMOG00000021572	SRL	99	73.187	Mola_mola
ENSMICG00000032307	SRL	96	96.460	ENSMODG00000016380	-	79	79.669	Monodelphis_domestica
ENSMICG00000032307	SRL	94	82.619	ENSMALG00000005039	srl	98	82.619	Monopterus_albus
ENSMICG00000032307	SRL	88	76.683	ENSMALG00000000670	SRL	97	75.904	Monopterus_albus
ENSMICG00000032307	SRL	97	95.624	MGP_CAROLIEiJ_G0020400	Srl	96	95.614	Mus_caroli
ENSMICG00000032307	SRL	97	95.624	ENSMUSG00000022519	Srl	96	95.614	Mus_musculus
ENSMICG00000032307	SRL	93	96.606	MGP_PahariEiJ_G0016108	Srl	71	78.560	Mus_pahari
ENSMICG00000032307	SRL	97	95.624	MGP_SPRETEiJ_G0021294	Srl	96	95.614	Mus_spretus
ENSMICG00000032307	SRL	98	95.464	ENSMPUG00000015025	SRL	97	76.527	Mustela_putorius_furo
ENSMICG00000032307	SRL	99	93.206	ENSMLUG00000030733	SRL	99	76.478	Myotis_lucifugus
ENSMICG00000032307	SRL	97	96.061	ENSNGAG00000019741	Srl	96	96.053	Nannospalax_galili
ENSMICG00000032307	SRL	94	73.304	ENSNBRG00000002422	SRL	62	68.889	Neolamprologus_brichardi
ENSMICG00000032307	SRL	98	81.290	ENSNBRG00000023775	srl	97	82.018	Neolamprologus_brichardi
ENSMICG00000032307	SRL	100	89.429	ENSNLEG00000029051	SRL	100	89.429	Nomascus_leucogenys
ENSMICG00000032307	SRL	96	90.508	ENSOPRG00000000477	-	98	72.867	Ochotona_princeps
ENSMICG00000032307	SRL	97	95.624	ENSODEG00000013256	SRL	96	95.614	Octodon_degus
ENSMICG00000032307	SRL	100	79.704	ENSONIG00000005192	srl	96	81.898	Oreochromis_niloticus
ENSMICG00000032307	SRL	96	96.468	ENSOCUG00000025140	SRL	98	72.808	Oryctolagus_cuniculus
ENSMICG00000032307	SRL	93	75.339	ENSORLG00000015064	SRL	99	73.846	Oryzias_latipes
ENSMICG00000032307	SRL	100	79.915	ENSORLG00000008291	srl	92	85.825	Oryzias_latipes
ENSMICG00000032307	SRL	100	79.704	ENSORLG00020019784	srl	79	85.788	Oryzias_latipes_hni
ENSMICG00000032307	SRL	93	75.566	ENSORLG00020018173	SRL	99	74.066	Oryzias_latipes_hni
ENSMICG00000032307	SRL	100	79.281	ENSORLG00015009342	srl	93	81.099	Oryzias_latipes_hsok
ENSMICG00000032307	SRL	93	75.792	ENSORLG00015019063	SRL	99	74.286	Oryzias_latipes_hsok
ENSMICG00000032307	SRL	100	79.493	ENSOMEG00000010006	srl	98	82.727	Oryzias_melastigma
ENSMICG00000032307	SRL	93	73.626	ENSOMEG00000005682	SRL	53	73.626	Oryzias_melastigma
ENSMICG00000032307	SRL	96	97.130	ENSOGAG00000029266	SRL	99	82.260	Otolemur_garnettii
ENSMICG00000032307	SRL	99	94.206	ENSOARG00000003074	SRL	57	95.575	Ovis_aries
ENSMICG00000032307	SRL	97	96.507	ENSPPAG00000024919	-	100	97.448	Pan_paniscus
ENSMICG00000032307	SRL	100	95.772	ENSPPRG00000010274	SRL	100	97.448	Panthera_pardus
ENSMICG00000032307	SRL	100	95.772	ENSPTIG00000015162	SRL	100	97.448	Panthera_tigris_altaica
ENSMICG00000032307	SRL	100	95.772	ENSPTRG00000007712	SRL	100	97.448	Pan_troglodytes
ENSMICG00000032307	SRL	98	95.671	ENSPANG00000013804	SRL	98	96.476	Papio_anubis
ENSMICG00000032307	SRL	99	82.766	ENSPKIG00000006405	srl	97	83.442	Paramormyrops_kingsleyae
ENSMICG00000032307	SRL	100	73.573	ENSPKIG00000024974	SRL	88	76.749	Paramormyrops_kingsleyae
ENSMICG00000032307	SRL	96	90.929	ENSPSIG00000008586	SRL	58	89.588	Pelodiscus_sinensis
ENSMICG00000032307	SRL	96	83.186	ENSPMGG00000021081	srl	97	83.186	Periophthalmus_magnuspinnatus
ENSMICG00000032307	SRL	94	72.912	ENSPMGG00000023505	-	100	72.197	Periophthalmus_magnuspinnatus
ENSMICG00000032307	SRL	96	96.491	ENSPEMG00000015842	Srl	96	96.491	Peromyscus_maniculatus_bairdii
ENSMICG00000032307	SRL	89	68.119	ENSPMAG00000004786	srl	99	67.890	Petromyzon_marinus
ENSMICG00000032307	SRL	96	96.018	ENSPCIG00000012128	SRL	99	96.018	Phascolarctos_cinereus
ENSMICG00000032307	SRL	100	78.557	ENSPFOG00000011408	srl	94	81.498	Poecilia_formosa
ENSMICG00000032307	SRL	97	81.169	ENSPLAG00000008017	srl	98	81.758	Poecilia_latipinna
ENSMICG00000032307	SRL	93	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSMICG00000032307	SRL	93	73.961	ENSPMEG00000005890	SRL	59	74.286	Poecilia_mexicana
ENSMICG00000032307	SRL	100	80.338	ENSPMEG00000006745	srl	98	81.758	Poecilia_mexicana
ENSMICG00000032307	SRL	100	80.127	ENSPREG00000007751	srl	98	83.070	Poecilia_reticulata
ENSMICG00000032307	SRL	93	77.376	ENSPREG00000000315	SRL	98	76.244	Poecilia_reticulata
ENSMICG00000032307	SRL	89	97.375	ENSPPYG00000007053	SRL	98	97.375	Pongo_abelii
ENSMICG00000032307	SRL	96	95.575	ENSPCAG00000003378	-	89	92.308	Procavia_capensis
ENSMICG00000032307	SRL	100	98.520	ENSPCOG00000023135	SRL	100	98.608	Propithecus_coquereli
ENSMICG00000032307	SRL	96	96.689	ENSPVAG00000006586	SRL	100	73.635	Pteropus_vampyrus
ENSMICG00000032307	SRL	94	73.304	ENSPNYG00000003423	SRL	61	68.889	Pundamilia_nyererei
ENSMICG00000032307	SRL	98	81.290	ENSPNYG00000001200	srl	98	82.444	Pundamilia_nyererei
ENSMICG00000032307	SRL	99	71.975	ENSPNAG00000007361	-	91	74.887	Pygocentrus_nattereri
ENSMICG00000032307	SRL	100	79.493	ENSPNAG00000023106	srl	96	82.405	Pygocentrus_nattereri
ENSMICG00000032307	SRL	96	96.247	ENSRNOG00000005269	Srl	98	69.944	Rattus_norvegicus
ENSMICG00000032307	SRL	96	96.689	ENSRBIG00000042358	SRL	100	74.945	Rhinopithecus_bieti
ENSMICG00000032307	SRL	96	96.468	ENSSBOG00000029273	SRL	100	95.772	Saimiri_boliviensis_boliviensis
ENSMICG00000032307	SRL	97	95.186	ENSSHAG00000011715	-	93	77.888	Sarcophilus_harrisii
ENSMICG00000032307	SRL	100	78.969	ENSSFOG00015009773	srl	98	81.957	Scleropages_formosus
ENSMICG00000032307	SRL	93	77.149	ENSSFOG00015021327	SRL	53	73.941	Scleropages_formosus
ENSMICG00000032307	SRL	94	73.203	ENSSMAG00000002232	SRL	50	72.210	Scophthalmus_maximus
ENSMICG00000032307	SRL	100	80.127	ENSSMAG00000016274	srl	98	81.778	Scophthalmus_maximus
ENSMICG00000032307	SRL	94	83.747	ENSSDUG00000010808	srl	98	83.747	Seriola_dumerili
ENSMICG00000032307	SRL	94	75.333	ENSSDUG00000009161	SRL	99	75.333	Seriola_dumerili
ENSMICG00000032307	SRL	96	82.379	ENSSLDG00000022024	srl	96	83.747	Seriola_lalandi_dorsalis
ENSMICG00000032307	SRL	94	74.891	ENSSLDG00000014601	SRL	100	75.000	Seriola_lalandi_dorsalis
ENSMICG00000032307	SRL	96	90.287	ENSSPUG00000016859	SRL	99	90.287	Sphenodon_punctatus
ENSMICG00000032307	SRL	93	77.098	ENSSPAG00000014254	SRL	98	76.136	Stegastes_partitus
ENSMICG00000032307	SRL	100	81.184	ENSSPAG00000019105	srl	96	82.781	Stegastes_partitus
ENSMICG00000032307	SRL	96	95.604	ENSSSCG00000007949	SRL	99	96.205	Sus_scrofa
ENSMICG00000032307	SRL	96	90.708	ENSTGUG00000003951	-	99	90.708	Taeniopygia_guttata
ENSMICG00000032307	SRL	77	93.094	ENSTGUG00000016121	-	96	93.966	Taeniopygia_guttata
ENSMICG00000032307	SRL	89	75.656	ENSTRUG00000013310	SRL	55	76.019	Takifugu_rubripes
ENSMICG00000032307	SRL	100	80.761	ENSTRUG00000006005	srl	94	83.484	Takifugu_rubripes
ENSMICG00000032307	SRL	93	83.258	ENSTNIG00000009739	srl	94	83.258	Tetraodon_nigroviridis
ENSMICG00000032307	SRL	93	95.682	ENSTTRG00000002709	-	61	95.682	Tursiops_truncatus
ENSMICG00000032307	SRL	96	96.264	ENSUAMG00000005701	SRL	98	76.611	Ursus_americanus
ENSMICG00000032307	SRL	96	96.484	ENSUMAG00000002574	SRL	98	76.253	Ursus_maritimus
ENSMICG00000032307	SRL	96	96.491	ENSVVUG00000016331	-	87	76.941	Vulpes_vulpes
ENSMICG00000032307	SRL	96	89.602	ENSXETG00000017313	srl	100	89.602	Xenopus_tropicalis
ENSMICG00000032307	SRL	95	75.388	ENSXCOG00000014584	SRL	100	75.388	Xiphophorus_couchianus
ENSMICG00000032307	SRL	89	85.036	ENSXCOG00000010424	srl	97	85.036	Xiphophorus_couchianus
ENSMICG00000032307	SRL	100	80.338	ENSXMAG00000004625	srl	92	81.938	Xiphophorus_maculatus
ENSMICG00000032307	SRL	97	72.766	ENSXMAG00000027598	SRL	62	74.945	Xiphophorus_maculatus