EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMICG00000032361 (Gene tree)
Gene ID
105861337
Gene Symbol
-
Alias
-
Full Name
LSM3 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Plus strand
Length
5181 bases
Position
chr22:3495790-3500970
Accession
105861337
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000033532LSMPF01423.226.3e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000032545-741XM_012746731ENSMICP00000033532102 (aa)XP_012602185UPI00063F3EF8
Gene Model
Click here to download ENSMICG00000032361's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000032361's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMICG00000032361-10086.275ENSMICG00000027821-10086.275
ENSMICG00000032361-7731.707ENSMICG00000031545SNRPD26931.707
ENSMICG00000032361-7434.667ENSMICG00000005353LSM58234.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000032361-10099.020ENSG00000170860LSM310099.020Homo_sapiens
ENSMICG00000032361-10094.118ENSAPOG00000018947lsm310094.118Acanthochromis_polyacanthus
ENSMICG00000032361-10099.020ENSAMEG00000009405LSM310099.020Ailuropoda_melanoleuca
ENSMICG00000032361-10093.137ENSACIG00000004574lsm37193.137Amphilophus_citrinellus
ENSMICG00000032361-10094.118ENSAOCG00000007658lsm310094.118Amphiprion_ocellaris
ENSMICG00000032361-10094.118ENSAPEG00000018621lsm310094.118Amphiprion_percula
ENSMICG00000032361-10094.118ENSATEG00000005153lsm310094.118Anabas_testudineus
ENSMICG00000032361-93100.000ENSAPLG00000014499LSM3100100.000Anas_platyrhynchos
ENSMICG00000032361-10098.039ENSACAG00000013503LSM310098.039Anolis_carolinensis
ENSMICG00000032361-10095.098ENSANAG00000002903-10095.098Aotus_nancymaae
ENSMICG00000032361-10099.020ENSANAG00000034627LSM310099.020Aotus_nancymaae
ENSMICG00000032361-9396.842ENSACLG00000001726-9296.842Astatotilapia_calliptera
ENSMICG00000032361-10096.078ENSAMXG00000041214lsm310096.078Astyanax_mexicanus
ENSMICG00000032361-93100.000ENSBTAG00000007363LSM399100.000Bos_taurus
ENSMICG00000032361-10069.608WBGene00003077lsm-310069.608Caenorhabditis_elegans
ENSMICG00000032361-10097.059ENSCAFG00000001760LSM310097.059Canis_familiaris
ENSMICG00000032361-10096.078ENSCAFG00020026452-10096.078Canis_lupus_dingo
ENSMICG00000032361-10097.059ENSCAFG00020021584-10097.059Canis_lupus_dingo
ENSMICG00000032361-10097.059ENSCAFG00020017266-10097.059Canis_lupus_dingo
ENSMICG00000032361-10087.850ENSCAFG00020020950-10087.850Canis_lupus_dingo
ENSMICG00000032361-10090.196ENSCAFG00020016680-10090.196Canis_lupus_dingo
ENSMICG00000032361-10099.020ENSCHIG00000024650LSM310099.020Capra_hircus
ENSMICG00000032361-10098.039ENSTSYG00000005204-10098.039Carlito_syrichta
ENSMICG00000032361-9979.208ENSTSYG00000028528-9979.208Carlito_syrichta
ENSMICG00000032361-93100.000ENSCAPG00000015760LSM399100.000Cavia_aperea
ENSMICG00000032361-10099.020ENSCPOG00000034071LSM310099.020Cavia_porcellus
ENSMICG00000032361-10099.020ENSCCAG00000019503-10099.020Cebus_capucinus
ENSMICG00000032361-10079.412ENSCCAG00000032763-10079.412Cebus_capucinus
ENSMICG00000032361-10099.020ENSCCAG00000036499-10099.020Cebus_capucinus
ENSMICG00000032361-9978.218ENSCATG00000031630-9978.218Cercocebus_atys
ENSMICG00000032361-10099.020ENSCATG00000039421LSM310099.020Cercocebus_atys
ENSMICG00000032361-10099.020ENSCLAG00000015997LSM310099.020Chinchilla_lanigera
ENSMICG00000032361-10094.118ENSCSAG00000019525-10094.118Chlorocebus_sabaeus
ENSMICG00000032361-10098.039ENSCPBG00000014531LSM310098.039Chrysemys_picta_bellii
ENSMICG00000032361-10080.769ENSCSAVG00000009542-10080.769Ciona_savignyi
ENSMICG00000032361-10096.078ENSCANG00000038037-10096.078Colobus_angolensis_palliatus
ENSMICG00000032361-10094.118ENSCANG00000018782-10094.118Colobus_angolensis_palliatus
ENSMICG00000032361-10099.020ENSCANG00000033944-10099.020Colobus_angolensis_palliatus
ENSMICG00000032361-10099.020ENSCGRG00001017598Lsm310099.020Cricetulus_griseus_chok1gshd
ENSMICG00000032361-10074.757ENSCGRG00001008639-10074.757Cricetulus_griseus_chok1gshd
ENSMICG00000032361-9883.000ENSCGRG00001011396-10083.000Cricetulus_griseus_chok1gshd
ENSMICG00000032361-10099.020ENSCGRG00000016159Lsm310099.020Cricetulus_griseus_crigri
ENSMICG00000032361-9384.211ENSCGRG00000012129-10084.211Cricetulus_griseus_crigri
ENSMICG00000032361-10094.118ENSCSEG00000015071lsm37794.118Cynoglossus_semilaevis
ENSMICG00000032361-10093.137ENSCVAG00000006933lsm310093.137Cyprinodon_variegatus
ENSMICG00000032361-10096.078ENSDARG00000089663lsm310096.078Danio_rerio
ENSMICG00000032361-10099.020ENSDNOG00000030808LSM310099.020Dasypus_novemcinctus
ENSMICG00000032361-10099.020ENSDORG00000006894-10099.020Dipodomys_ordii
ENSMICG00000032361-10079.412ENSDORG00000024490-10079.412Dipodomys_ordii
ENSMICG00000032361-10075.728FBgn0051184LSm310075.728Drosophila_melanogaster
ENSMICG00000032361-10099.020ENSETEG00000016207LSM310099.020Echinops_telfairi
ENSMICG00000032361-10089.216ENSEBUG00000004943lsm310089.216Eptatretus_burgeri
ENSMICG00000032361-10099.020ENSEASG00005015443LSM310099.020Equus_asinus_asinus
ENSMICG00000032361-10099.020ENSECAG00000007803LSM310099.020Equus_caballus
ENSMICG00000032361-10095.098ENSELUG00000018922lsm310095.098Esox_lucius
ENSMICG00000032361-10099.020ENSFCAG00000038453LSM310099.020Felis_catus
ENSMICG00000032361-10074.510ENSFCAG00000044344-10074.510Felis_catus
ENSMICG00000032361-10098.039ENSFALG00000012644LSM310098.039Ficedula_albicollis
ENSMICG00000032361-10099.020ENSFDAG00000011470LSM310099.020Fukomys_damarensis
ENSMICG00000032361-10094.118ENSFHEG00000000876lsm310094.118Fundulus_heteroclitus
ENSMICG00000032361-9396.842ENSGMOG00000011024lsm310096.842Gadus_morhua
ENSMICG00000032361-10094.118ENSGAFG00000013965lsm310094.118Gambusia_affinis
ENSMICG00000032361-10094.118ENSGACG00000003488lsm310094.118Gasterosteus_aculeatus
ENSMICG00000032361-10098.039ENSGAGG00000025707LSM310098.039Gopherus_agassizii
ENSMICG00000032361-10099.020ENSGGOG00000010006LSM310099.020Gorilla_gorilla
ENSMICG00000032361-10094.118ENSHBUG00000022399lsm310094.118Haplochromis_burtoni
ENSMICG00000032361-10099.020ENSHGLG00000000651LSM310099.020Heterocephalus_glaber_female
ENSMICG00000032361-10079.412ENSHGLG00000015564-10079.412Heterocephalus_glaber_female
ENSMICG00000032361-10099.020ENSHGLG00100011343LSM310099.020Heterocephalus_glaber_male
ENSMICG00000032361-10079.412ENSHGLG00100010658-10079.412Heterocephalus_glaber_male
ENSMICG00000032361-10093.137ENSHCOG00000013481lsm310093.137Hippocampus_comes
ENSMICG00000032361-10096.078ENSIPUG00000009207lsm310096.078Ictalurus_punctatus
ENSMICG00000032361-10099.020ENSSTOG00000006842LSM310099.020Ictidomys_tridecemlineatus
ENSMICG00000032361-10090.196ENSJJAG00000012797-10090.196Jaculus_jaculus
ENSMICG00000032361-10099.020ENSJJAG00000017351Lsm310099.020Jaculus_jaculus
ENSMICG00000032361-9974.510ENSJJAG00000018311-10074.510Jaculus_jaculus
ENSMICG00000032361-10093.137ENSKMAG00000015182lsm310093.137Kryptolebias_marmoratus
ENSMICG00000032361-9693.878ENSLBEG00000021292lsm310093.878Labrus_bergylta
ENSMICG00000032361-10096.078ENSLOCG00000013560lsm310096.078Lepisosteus_oculatus
ENSMICG00000032361-10098.058ENSLAFG00000023308LSM310098.058Loxodonta_africana
ENSMICG00000032361-10099.020ENSMFAG00000003185LSM310099.020Macaca_fascicularis
ENSMICG00000032361-10099.020ENSMMUG00000023126LSM310099.020Macaca_mulatta
ENSMICG00000032361-9577.320ENSMMUG00000002294-9477.320Macaca_mulatta
ENSMICG00000032361-10076.471ENSMMUG00000043596-10076.471Macaca_mulatta
ENSMICG00000032361-9980.198ENSMNEG00000037686-9980.198Macaca_nemestrina
ENSMICG00000032361-10099.020ENSMNEG00000043632LSM310099.020Macaca_nemestrina
ENSMICG00000032361-10099.020ENSMLEG00000036162LSM310099.020Mandrillus_leucophaeus
ENSMICG00000032361-10094.118ENSMAMG00000012807lsm310094.118Mastacembelus_armatus
ENSMICG00000032361-10094.118ENSMZEG00005016682lsm37394.118Maylandia_zebra
ENSMICG00000032361-93100.000ENSMGAG00000007776LSM399100.000Meleagris_gallopavo
ENSMICG00000032361-10099.020ENSMOCG00000014269Lsm310099.020Microtus_ochrogaster
ENSMICG00000032361-10093.137ENSMMOG00000020715lsm310093.137Mola_mola
ENSMICG00000032361-10098.039ENSMODG00000007275LSM310098.039Monodelphis_domestica
ENSMICG00000032361-10094.118ENSMALG00000006485lsm310094.118Monopterus_albus
ENSMICG00000032361-10099.020ENSMUSG00000034192Lsm310099.020Mus_musculus
ENSMICG00000032361-10099.020MGP_PahariEiJ_G0022402Lsm310099.020Mus_pahari
ENSMICG00000032361-10099.020MGP_SPRETEiJ_G0029681Lsm310099.020Mus_spretus
ENSMICG00000032361-8391.765ENSMPUG00000017256-10091.765Mustela_putorius_furo
ENSMICG00000032361-9787.879ENSMPUG00000019120-9787.879Mustela_putorius_furo
ENSMICG00000032361-10099.020ENSMLUG00000010677LSM310099.020Myotis_lucifugus
ENSMICG00000032361-10091.176ENSMLUG00000024700-10091.176Myotis_lucifugus
ENSMICG00000032361-10099.020ENSNGAG00000022450Lsm310099.020Nannospalax_galili
ENSMICG00000032361-9979.208ENSNGAG00000010207-9979.208Nannospalax_galili
ENSMICG00000032361-10073.529ENSNGAG00000013716-10073.529Nannospalax_galili
ENSMICG00000032361-10094.118ENSNBRG00000014318lsm310094.118Neolamprologus_brichardi
ENSMICG00000032361-10099.020ENSNLEG00000005079LSM310099.020Nomascus_leucogenys
ENSMICG00000032361-10090.196ENSNLEG00000030229-10090.196Nomascus_leucogenys
ENSMICG00000032361-10091.176ENSODEG00000019403-10091.176Octodon_degus
ENSMICG00000032361-10097.059ENSODEG00000019158-10097.059Octodon_degus
ENSMICG00000032361-10099.020ENSODEG00000001726LSM310099.020Octodon_degus
ENSMICG00000032361-10098.039ENSODEG00000019740-10098.039Octodon_degus
ENSMICG00000032361-10094.118ENSONIG00000000370lsm310094.118Oreochromis_niloticus
ENSMICG00000032361-10094.118ENSONIG00000021369-10094.118Oreochromis_niloticus
ENSMICG00000032361-10098.039ENSOANG00000012273LSM310098.039Ornithorhynchus_anatinus
ENSMICG00000032361-10099.020ENSOCUG00000027653-10099.020Oryctolagus_cuniculus
ENSMICG00000032361-10094.118ENSOCUG00000011088-10094.118Oryctolagus_cuniculus
ENSMICG00000032361-10092.157ENSORLG00000025900lsm310092.157Oryzias_latipes
ENSMICG00000032361-10092.157ENSORLG00020007125lsm310092.157Oryzias_latipes_hni
ENSMICG00000032361-10092.157ENSORLG00015002944lsm310092.157Oryzias_latipes_hsok
ENSMICG00000032361-10092.157ENSOMEG00000001915lsm310092.157Oryzias_melastigma
ENSMICG00000032361-9696.939ENSOGAG00000028858-10096.939Otolemur_garnettii
ENSMICG00000032361-10089.216ENSOGAG00000033051-10089.216Otolemur_garnettii
ENSMICG00000032361-10099.020ENSOGAG00000007659-10099.020Otolemur_garnettii
ENSMICG00000032361-10098.058ENSOARG00000000600LSM310098.058Ovis_aries
ENSMICG00000032361-10099.020ENSPPAG00000034074LSM310099.020Pan_paniscus
ENSMICG00000032361-10098.039ENSPPRG00000020953-10098.039Panthera_pardus
ENSMICG00000032361-10099.020ENSPPRG00000012912-10099.020Panthera_pardus
ENSMICG00000032361-9991.089ENSPPRG00000010610-8991.089Panthera_pardus
ENSMICG00000032361-10099.020ENSPTIG00000003463-10099.020Panthera_tigris_altaica
ENSMICG00000032361-10099.020ENSPTIG00000013072-10099.020Panthera_tigris_altaica
ENSMICG00000032361-10099.020ENSPTRG00000014650LSM310099.020Pan_troglodytes
ENSMICG00000032361-10099.020ENSPANG00000009378LSM310099.020Papio_anubis
ENSMICG00000032361-10077.451ENSPANG00000032192-10077.451Papio_anubis
ENSMICG00000032361-10097.059ENSPKIG00000008037lsm39197.059Paramormyrops_kingsleyae
ENSMICG00000032361-10098.039ENSPSIG00000015720LSM310098.039Pelodiscus_sinensis
ENSMICG00000032361-9394.737ENSPMGG00000012103lsm39694.737Periophthalmus_magnuspinnatus
ENSMICG00000032361-10099.020ENSPEMG00000015797Lsm310099.020Peromyscus_maniculatus_bairdii
ENSMICG00000032361-10082.353ENSPEMG00000020213-10082.353Peromyscus_maniculatus_bairdii
ENSMICG00000032361-10094.118ENSPFOG00000008372lsm310094.118Poecilia_formosa
ENSMICG00000032361-10094.118ENSPLAG00000000563lsm310094.118Poecilia_latipinna
ENSMICG00000032361-10094.118ENSPMEG00000022052lsm310094.118Poecilia_mexicana
ENSMICG00000032361-10094.118ENSPREG00000022485lsm310094.118Poecilia_reticulata
ENSMICG00000032361-10099.020ENSPPYG00000013402LSM310099.020Pongo_abelii
ENSMICG00000032361-10099.020ENSPCAG00000017077LSM310099.020Procavia_capensis
ENSMICG00000032361-100100.000ENSPCOG00000016217-100100.000Propithecus_coquereli
ENSMICG00000032361-9478.125ENSPCOG00000014435-9878.125Propithecus_coquereli
ENSMICG00000032361-10099.020ENSPVAG00000016795LSM310099.020Pteropus_vampyrus
ENSMICG00000032361-10094.118ENSPNYG00000009552lsm37394.118Pundamilia_nyererei
ENSMICG00000032361-10096.078ENSPNAG00000023467lsm310096.078Pygocentrus_nattereri
ENSMICG00000032361-10099.020ENSRNOG00000008733Lsm310099.020Rattus_norvegicus
ENSMICG00000032361-10082.353ENSRBIG00000043783-10082.353Rhinopithecus_bieti
ENSMICG00000032361-10099.020ENSRBIG00000034399LSM310099.020Rhinopithecus_bieti
ENSMICG00000032361-10080.392ENSRROG00000044056-10080.392Rhinopithecus_roxellana
ENSMICG00000032361-10088.235ENSRROG00000044047-10088.235Rhinopithecus_roxellana
ENSMICG00000032361-10099.020ENSRROG00000033276-10099.020Rhinopithecus_roxellana
ENSMICG00000032361-10083.333ENSRROG00000039868-10083.333Rhinopithecus_roxellana
ENSMICG00000032361-10099.020ENSSBOG00000024310LSM310099.020Saimiri_boliviensis_boliviensis
ENSMICG00000032361-10096.078ENSSFOG00015007071lsm310096.078Scleropages_formosus
ENSMICG00000032361-10094.118ENSSMAG00000001818lsm310094.118Scophthalmus_maximus
ENSMICG00000032361-10094.118ENSSDUG00000006040lsm310094.118Seriola_dumerili
ENSMICG00000032361-10094.118ENSSLDG00000006399lsm310094.118Seriola_lalandi_dorsalis
ENSMICG00000032361-57100.000ENSSARG00000005275-100100.000Sorex_araneus
ENSMICG00000032361-94100.000ENSSPUG00000017047-100100.000Sphenodon_punctatus
ENSMICG00000032361-10088.235ENSSPUG00000005394LSM310088.235Sphenodon_punctatus
ENSMICG00000032361-10083.333ENSSPAG00000000934lsm310083.333Stegastes_partitus
ENSMICG00000032361-9576.289ENSSSCG00000023718-9976.289Sus_scrofa
ENSMICG00000032361-10099.020ENSSSCG00000011601LSM310099.020Sus_scrofa
ENSMICG00000032361-10098.039ENSTGUG00000008327LSM310098.039Taeniopygia_guttata
ENSMICG00000032361-10093.137ENSTRUG00000023175lsm310093.137Takifugu_rubripes
ENSMICG00000032361-10093.137ENSTNIG00000005589lsm310093.137Tetraodon_nigroviridis
ENSMICG00000032361-10089.216ENSTBEG00000001050-9989.216Tupaia_belangeri
ENSMICG00000032361-10099.020ENSTTRG00000011197LSM310099.020Tursiops_truncatus
ENSMICG00000032361-10099.020ENSUAMG00000017250-10099.020Ursus_americanus
ENSMICG00000032361-10099.020ENSUMAG00000015905LSM310099.020Ursus_maritimus
ENSMICG00000032361-93100.000ENSVPAG00000010709LSM3100100.000Vicugna_pacos
ENSMICG00000032361-10093.137ENSVVUG00000005684-10093.137Vulpes_vulpes
ENSMICG00000032361-10090.196ENSVVUG00000024228-10090.196Vulpes_vulpes
ENSMICG00000032361-10094.118ENSVVUG00000006481-10094.118Vulpes_vulpes
ENSMICG00000032361-10094.118ENSVVUG00000029294-10094.118Vulpes_vulpes
ENSMICG00000032361-10095.098ENSVVUG00000007332-9195.098Vulpes_vulpes
ENSMICG00000032361-10097.059ENSXETG00000011534lsm310097.059Xenopus_tropicalis
ENSMICG00000032361-10094.118ENSXCOG00000017432LSM310094.118Xiphophorus_couchianus
ENSMICG00000032361-10094.118ENSXMAG00000009151lsm310094.118Xiphophorus_maculatus

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