EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000032609 (Gene tree)
Gene ID: 105872598
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 5235 bases
Position: chrKV890135.1:2995130-3000364
Accession: 105872598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000029337	Ribosomal_S18	PF01084.20	9.1e-22	1	1
ENSMICP00000025047	Ribosomal_S18	PF01084.20	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000037004	-	556	XM_012766743	ENSMICP00000029337	144 (aa)	XP_012622197	UPI00064376C1
ENSMICT00000049356	-	351	-	ENSMICP00000025047	116 (aa)	-	UPI00085B1DD4
ENSMICT00000037606	-	213	-	ENSMICP00000039502	71 (aa)	-	UPI00085B1BA9

Gene Model

Click here to download ENSMICG00000032609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000032609's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000032609	-	85	31.655	ENSMICG00000005062	MRPS18A	66	31.655
ENSMICG00000032609	-	100	91.453	ENSMICG00000037615	-	100	91.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000032609	-	100	84.483	ENSG00000163319	MRPS18C	100	84.483	Homo_sapiens
ENSMICG00000032609	-	100	74.306	ENSAMEG00000004915	MRPS18C	100	74.306	Ailuropoda_melanoleuca
ENSMICG00000032609	-	99	75.630	ENSANAG00000025323	-	94	75.630	Aotus_nancymaae
ENSMICG00000032609	-	100	74.306	ENSANAG00000028055	-	100	74.306	Aotus_nancymaae
ENSMICG00000032609	-	100	73.276	ENSBTAG00000049836	-	100	73.276	Bos_taurus
ENSMICG00000032609	-	100	81.250	ENSBTAG00000018155	MRPS18C	100	81.250	Bos_taurus
ENSMICG00000032609	-	100	85.417	ENSCJAG00000042247	MRPS18C	100	84.483	Callithrix_jacchus
ENSMICG00000032609	-	100	78.472	ENSCAFG00020010491	MRPS18C	100	78.472	Canis_lupus_dingo
ENSMICG00000032609	-	100	68.966	ENSCHIG00000016551	-	100	68.966	Capra_hircus
ENSMICG00000032609	-	90	83.846	ENSCHIG00000004461	-	90	83.846	Capra_hircus
ENSMICG00000032609	-	100	70.833	ENSCHIG00000022740	-	100	70.833	Capra_hircus
ENSMICG00000032609	-	99	65.972	ENSCHIG00000018805	-	99	65.972	Capra_hircus
ENSMICG00000032609	-	75	70.370	ENSCHIG00000019359	-	98	70.370	Capra_hircus
ENSMICG00000032609	-	100	83.333	ENSTSYG00000012924	MRPS18C	100	83.333	Carlito_syrichta
ENSMICG00000032609	-	100	79.167	ENSCPOG00000009198	MRPS18C	100	79.167	Cavia_porcellus
ENSMICG00000032609	-	99	72.028	ENSCCAG00000025155	-	95	72.028	Cebus_capucinus
ENSMICG00000032609	-	100	82.639	ENSCCAG00000019347	-	100	82.639	Cebus_capucinus
ENSMICG00000032609	-	100	85.417	ENSCCAG00000026577	-	100	85.417	Cebus_capucinus
ENSMICG00000032609	-	100	72.917	ENSCCAG00000028283	-	100	72.917	Cebus_capucinus
ENSMICG00000032609	-	100	87.069	ENSCATG00000040697	MRPS18C	100	87.069	Cercocebus_atys
ENSMICG00000032609	-	100	81.944	ENSCLAG00000017397	-	100	81.944	Chinchilla_lanigera
ENSMICG00000032609	-	100	82.192	ENSCLAG00000008205	-	100	82.192	Chinchilla_lanigera
ENSMICG00000032609	-	98	75.439	ENSCANG00000037347	-	97	75.439	Colobus_angolensis_palliatus
ENSMICG00000032609	-	100	72.917	ENSCANG00000041165	-	100	72.917	Colobus_angolensis_palliatus
ENSMICG00000032609	-	100	87.069	ENSCANG00000038907	MRPS18C	100	87.069	Colobus_angolensis_palliatus
ENSMICG00000032609	-	100	78.472	ENSCGRG00001000103	Mrps18c	100	78.472	Cricetulus_griseus_chok1gshd
ENSMICG00000032609	-	100	78.472	ENSCGRG00000002192	Mrps18c	100	78.472	Cricetulus_griseus_crigri
ENSMICG00000032609	-	99	76.761	ENSDORG00000012749	Mrps18c	100	76.761	Dipodomys_ordii
ENSMICG00000032609	-	100	55.634	ENSETEG00000012223	-	100	55.634	Echinops_telfairi
ENSMICG00000032609	-	100	84.028	ENSEASG00005013234	MRPS18C	100	84.028	Equus_asinus_asinus
ENSMICG00000032609	-	100	84.722	ENSECAG00000020387	MRPS18C	100	84.722	Equus_caballus
ENSMICG00000032609	-	100	57.639	ENSEEUG00000003504	MRPS18C	99	57.639	Erinaceus_europaeus
ENSMICG00000032609	-	100	81.250	ENSFCAG00000042464	MRPS18C	100	81.250	Felis_catus
ENSMICG00000032609	-	100	81.250	ENSFDAG00000000250	-	100	81.250	Fukomys_damarensis
ENSMICG00000032609	-	100	68.056	ENSFDAG00000008778	-	100	68.056	Fukomys_damarensis
ENSMICG00000032609	-	100	68.750	ENSGGOG00000008603	MRPS18C	100	68.750	Gorilla_gorilla
ENSMICG00000032609	-	100	69.828	ENSGGOG00000037903	-	100	69.828	Gorilla_gorilla
ENSMICG00000032609	-	100	75.862	ENSGGOG00000040785	-	100	75.862	Gorilla_gorilla
ENSMICG00000032609	-	100	80.822	ENSHGLG00000002953	-	100	80.822	Heterocephalus_glaber_female
ENSMICG00000032609	-	100	75.694	ENSHGLG00000020134	-	100	75.694	Heterocephalus_glaber_female
ENSMICG00000032609	-	100	74.306	ENSHGLG00000012671	-	98	74.306	Heterocephalus_glaber_female
ENSMICG00000032609	-	100	75.694	ENSHGLG00100019678	-	100	75.694	Heterocephalus_glaber_male
ENSMICG00000032609	-	100	74.306	ENSHGLG00100015568	-	98	74.306	Heterocephalus_glaber_male
ENSMICG00000032609	-	100	80.822	ENSHGLG00100016235	-	100	80.822	Heterocephalus_glaber_male
ENSMICG00000032609	-	100	81.250	ENSSTOG00000007989	MRPS18C	100	81.250	Ictidomys_tridecemlineatus
ENSMICG00000032609	-	100	66.379	ENSJJAG00000022437	Mrps18c	100	66.379	Jaculus_jaculus
ENSMICG00000032609	-	100	79.861	ENSLAFG00000001059	MRPS18C	100	79.861	Loxodonta_africana
ENSMICG00000032609	-	100	69.167	ENSMFAG00000041276	-	100	69.167	Macaca_fascicularis
ENSMICG00000032609	-	100	85.417	ENSMFAG00000003991	MRPS18C	100	85.417	Macaca_fascicularis
ENSMICG00000032609	-	100	72.222	ENSMMUG00000039146	-	100	72.222	Macaca_mulatta
ENSMICG00000032609	-	100	85.345	ENSMMUG00000015353	MRPS18C	100	85.345	Macaca_mulatta
ENSMICG00000032609	-	100	75.694	ENSMMUG00000048717	-	100	75.694	Macaca_mulatta
ENSMICG00000032609	-	100	85.417	ENSMNEG00000043663	MRPS18C	100	85.417	Macaca_nemestrina
ENSMICG00000032609	-	100	65.833	ENSMNEG00000018700	-	100	65.833	Macaca_nemestrina
ENSMICG00000032609	-	100	87.069	ENSMLEG00000038884	MRPS18C	100	87.069	Mandrillus_leucophaeus
ENSMICG00000032609	-	100	78.472	ENSMOCG00000015591	-	100	78.472	Microtus_ochrogaster
ENSMICG00000032609	-	100	76.389	ENSMOCG00000009898	-	100	76.389	Microtus_ochrogaster
ENSMICG00000032609	-	97	71.831	ENSMODG00000020773	MRPS18C	99	71.831	Monodelphis_domestica
ENSMICG00000032609	-	100	78.767	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	Mus_caroli
ENSMICG00000032609	-	100	78.767	ENSMUSG00000016833	Mrps18c	100	78.767	Mus_musculus
ENSMICG00000032609	-	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSMICG00000032609	-	83	75.410	MGP_SPRETEiJ_G0028455	Mrps18c	93	75.410	Mus_spretus
ENSMICG00000032609	-	100	81.250	ENSMLUG00000017057	MRPS18C	100	81.250	Myotis_lucifugus
ENSMICG00000032609	-	88	81.890	ENSNGAG00000015980	Mrps18c	100	79.167	Nannospalax_galili
ENSMICG00000032609	-	100	77.778	ENSNLEG00000018188	-	100	77.778	Nomascus_leucogenys
ENSMICG00000032609	-	100	83.333	ENSNLEG00000009119	MRPS18C	100	83.333	Nomascus_leucogenys
ENSMICG00000032609	-	69	75.758	ENSOPRG00000004113	MRPS18C	68	75.758	Ochotona_princeps
ENSMICG00000032609	-	100	76.712	ENSODEG00000007599	-	100	76.712	Octodon_degus
ENSMICG00000032609	-	100	77.778	ENSODEG00000020349	-	100	77.778	Octodon_degus
ENSMICG00000032609	-	100	81.250	ENSOARG00000002770	MRPS18C	100	81.250	Ovis_aries
ENSMICG00000032609	-	100	71.552	ENSPPAG00000037400	-	100	71.552	Pan_paniscus
ENSMICG00000032609	-	100	84.483	ENSPPAG00000037122	MRPS18C	100	84.483	Pan_paniscus
ENSMICG00000032609	-	100	80.556	ENSPPRG00000011089	MRPS18C	100	80.556	Panthera_pardus
ENSMICG00000032609	-	100	79.861	ENSPTIG00000021242	MRPS18C	100	79.861	Panthera_tigris_altaica
ENSMICG00000032609	-	100	84.483	ENSPTRG00000016233	MRPS18C	100	84.483	Pan_troglodytes
ENSMICG00000032609	-	100	70.690	ENSPTRG00000047058	-	100	70.690	Pan_troglodytes
ENSMICG00000032609	-	100	72.222	ENSPANG00000034202	-	100	72.222	Papio_anubis
ENSMICG00000032609	-	100	86.207	ENSPANG00000033931	MRPS18C	100	86.207	Papio_anubis
ENSMICG00000032609	-	100	79.861	ENSPEMG00000008390	Mrps18c	100	79.861	Peromyscus_maniculatus_bairdii
ENSMICG00000032609	-	98	61.702	ENSPCIG00000000097	-	99	61.702	Phascolarctos_cinereus
ENSMICG00000032609	-	92	72.932	ENSPCIG00000005376	-	93	72.932	Phascolarctos_cinereus
ENSMICG00000032609	-	71	87.255	ENSPCIG00000019737	-	100	87.255	Phascolarctos_cinereus
ENSMICG00000032609	-	100	84.722	ENSPPYG00000025867	MRPS18C	100	84.722	Pongo_abelii
ENSMICG00000032609	-	99	79.021	ENSPPYG00000025835	-	100	79.021	Pongo_abelii
ENSMICG00000032609	-	100	77.778	ENSPCAG00000004975	MRPS18C	100	77.778	Procavia_capensis
ENSMICG00000032609	-	100	90.972	ENSPCOG00000017634	MRPS18C	100	90.972	Propithecus_coquereli
ENSMICG00000032609	-	69	79.798	ENSPVAG00000006439	MRPS18C	100	79.798	Pteropus_vampyrus
ENSMICG00000032609	-	100	74.658	ENSRNOG00000002178	Mrps18c	100	74.658	Rattus_norvegicus
ENSMICG00000032609	-	100	69.828	ENSRBIG00000031637	-	100	69.828	Rhinopithecus_bieti
ENSMICG00000032609	-	100	75.694	ENSRBIG00000035023	-	100	75.694	Rhinopithecus_bieti
ENSMICG00000032609	-	100	87.069	ENSRBIG00000041685	MRPS18C	100	87.069	Rhinopithecus_bieti
ENSMICG00000032609	-	100	75.694	ENSRROG00000033834	-	100	75.694	Rhinopithecus_roxellana
ENSMICG00000032609	-	100	87.069	ENSRROG00000044334	MRPS18C	100	87.069	Rhinopithecus_roxellana
ENSMICG00000032609	-	100	68.966	ENSRROG00000030722	-	100	68.966	Rhinopithecus_roxellana
ENSMICG00000032609	-	99	64.341	ENSSBOG00000032292	-	89	75.610	Saimiri_boliviensis_boliviensis
ENSMICG00000032609	-	100	84.722	ENSSBOG00000027568	-	100	84.722	Saimiri_boliviensis_boliviensis
ENSMICG00000032609	-	99	74.126	ENSSBOG00000022205	-	92	74.126	Saimiri_boliviensis_boliviensis
ENSMICG00000032609	-	100	64.583	ENSSBOG00000029234	-	100	64.583	Saimiri_boliviensis_boliviensis
ENSMICG00000032609	-	92	77.206	ENSSHAG00000007084	MRPS18C	94	77.206	Sarcophilus_harrisii
ENSMICG00000032609	-	100	83.333	ENSSSCG00000038042	MRPS18C	100	83.333	Sus_scrofa
ENSMICG00000032609	-	100	79.861	ENSTBEG00000012505	MRPS18C	100	79.861	Tupaia_belangeri
ENSMICG00000032609	-	100	85.417	ENSTTRG00000004897	MRPS18C	100	85.417	Tursiops_truncatus
ENSMICG00000032609	-	100	84.028	ENSUAMG00000012878	MRPS18C	100	84.028	Ursus_americanus
ENSMICG00000032609	-	100	84.028	ENSUMAG00000008829	MRPS18C	100	84.028	Ursus_maritimus
ENSMICG00000032609	-	100	81.944	ENSVPAG00000011358	MRPS18C	100	81.944	Vicugna_pacos
ENSMICG00000032609	-	100	79.167	ENSVVUG00000015672	MRPS18C	100	79.167	Vulpes_vulpes