EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMICG00000033181 (Gene tree)
Gene ID
105866972
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Microcebus_murinus
Status
putative
Strand
Minus strand
Length
23397 bases
Position
chr21:9592000-9615396
Accession
105866972
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMICP00000049609RRM_1PF00076.226.4e-3412
ENSMICP00000049609RRM_1PF00076.226.4e-3422
ENSMICP00000045219RRM_1PF00076.226.9e-3412
ENSMICP00000045219RRM_1PF00076.226.9e-3422
ENSMICP00000020307RRM_1PF00076.227.2e-3412
ENSMICP00000020307RRM_1PF00076.227.2e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMICT00000066973MSI1-2031047-ENSMICP00000049609348 (aa)-UPI000C2EAEF3
ENSMICT00000061621MSI1-2021074-ENSMICP00000045219357 (aa)-UPI000C2ED0DF
ENSMICT00000034310MSI1-2012884XM_012756669ENSMICP00000020307362 (aa)XP_012612123UPI0000073DD8
Gene Model
Click here to download ENSMICG00000033181's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000033181's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMICG00000033181MSI15241.209ENSMICG00000038136-6939.004
ENSMICG00000033181MSI15143.750ENSMICG00000030570HNRNPA2B17840.594
ENSMICG00000033181MSI15242.308ENSMICG00000032477HNRNPA17641.584
ENSMICG00000033181MSI15247.222ENSMICG00000001445-5541.250
ENSMICG00000033181MSI18036.842ENSMICG00000038011RBM388536.842
ENSMICG00000033181MSI17435.740ENSMICG00000003579DAZAP16934.967
ENSMICG00000033181MSI15236.667ENSMICG00000042686-7735.146
ENSMICG00000033181MSI15437.895ENSMICG00000009289-6437.895
ENSMICG00000033181MSI15246.667ENSMICG00000027030HNRNPAB7539.608
ENSMICG00000033181MSI15136.957ENSMICG00000036836-9032.911
ENSMICG00000033181MSI15246.111ENSMICG00000037040-8046.111
ENSMICG00000033181MSI110057.714ENSMICG00000032913-10059.557
ENSMICG00000033181MSI15233.516ENSMICG00000012308-6634.343
ENSMICG00000033181MSI15141.899ENSMICG00000012083-7138.589
ENSMICG00000033181MSI15637.179ENSMICG00000048969TRA2B6937.179
ENSMICG00000033181MSI15240.659ENSMICG00000031175-6241.667
ENSMICG00000033181MSI15343.590ENSMICG00000010984HNRNPD7640.161
ENSMICG00000033181MSI19670.746ENSMICG00000013598-9180.531
ENSMICG00000033181MSI15541.146ENSMICG00000029394-5041.361
ENSMICG00000033181MSI15338.860ENSMICG00000002750-6939.326
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMICG00000033181MSI1100100.000ENSG00000135097MSI1100100.000Homo_sapiens
ENSMICG00000033181MSI110084.254ENSAPOG00000023458-10084.254Acanthochromis_polyacanthus
ENSMICG00000033181MSI110083.791ENSAPOG00000003191MSI110083.791Acanthochromis_polyacanthus
ENSMICG00000033181MSI19882.181ENSAMEG00000013302MSI110082.181Ailuropoda_melanoleuca
ENSMICG00000033181MSI19483.642ENSACIG00000017754-7883.642Amphilophus_citrinellus
ENSMICG00000033181MSI19881.402ENSAOCG00000009031-9581.402Amphiprion_ocellaris
ENSMICG00000033181MSI110083.791ENSAOCG00000003804MSI110083.791Amphiprion_ocellaris
ENSMICG00000033181MSI110084.254ENSAPEG00000006857-8484.254Amphiprion_percula
ENSMICG00000033181MSI110083.791ENSAPEG00000003245MSI110083.791Amphiprion_percula
ENSMICG00000033181MSI110078.689ENSATEG00000023779-10078.689Anabas_testudineus
ENSMICG00000033181MSI110080.435ENSATEG00000017059MSI110080.435Anabas_testudineus
ENSMICG00000033181MSI110096.419ENSACAG00000002762MSI110096.419Anolis_carolinensis
ENSMICG00000033181MSI18296.309ENSANAG00000027901-9296.309Aotus_nancymaae
ENSMICG00000033181MSI1100100.000ENSANAG00000027151MSI1100100.000Aotus_nancymaae
ENSMICG00000033181MSI110083.978ENSACLG00000000117-10085.337Astatotilapia_calliptera
ENSMICG00000033181MSI110083.242ENSACLG00000011230MSI110083.242Astatotilapia_calliptera
ENSMICG00000033181MSI19483.735ENSAMXG00000038960msi17683.735Astyanax_mexicanus
ENSMICG00000033181MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSMICG00000033181MSI1100100.000ENSCJAG00000008578MSI1100100.000Callithrix_jacchus
ENSMICG00000033181MSI110099.724ENSCAFG00000010283MSI110099.724Canis_familiaris
ENSMICG00000033181MSI194100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSMICG00000033181MSI110094.580ENSCHIG00000024304MSI110094.580Capra_hircus
ENSMICG00000033181MSI194100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSMICG00000033181MSI19493.407ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSMICG00000033181MSI198100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSMICG00000033181MSI1100100.000ENSCCAG00000035567MSI1100100.000Cebus_capucinus
ENSMICG00000033181MSI1100100.000ENSCATG00000030019MSI1100100.000Cercocebus_atys
ENSMICG00000033181MSI198100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSMICG00000033181MSI17998.551ENSCSAG00000002265MSI19598.551Chlorocebus_sabaeus
ENSMICG00000033181MSI110095.856ENSCPBG00000011349MSI110095.856Chrysemys_picta_bellii
ENSMICG00000033181MSI198100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSMICG00000033181MSI1100100.000ENSCGRG00001018883Msi1100100.000Cricetulus_griseus_chok1gshd
ENSMICG00000033181MSI194100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSMICG00000033181MSI110083.149ENSCSEG00000008352-10083.149Cynoglossus_semilaevis
ENSMICG00000033181MSI110083.516ENSCSEG00000005834-10083.516Cynoglossus_semilaevis
ENSMICG00000033181MSI19879.167ENSCSEG00000011032MSI110079.167Cynoglossus_semilaevis
ENSMICG00000033181MSI110084.254ENSCVAG00000009100MSI110084.254Cyprinodon_variegatus
ENSMICG00000033181MSI15161.194ENSCVAG00000017430zgc:1107969461.194Cyprinodon_variegatus
ENSMICG00000033181MSI16468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSMICG00000033181MSI18082.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSMICG00000033181MSI19882.353ENSDARG00000010710msi110085.022Danio_rerio
ENSMICG00000033181MSI19889.970ENSDNOG00000005713MSI19189.970Dasypus_novemcinctus
ENSMICG00000033181MSI19899.102ENSDORG00000005610Msi19995.480Dipodomys_ordii
ENSMICG00000033181MSI19895.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSMICG00000033181MSI1100100.000ENSEASG00005004736MSI1100100.000Equus_asinus_asinus
ENSMICG00000033181MSI1100100.000ENSECAG00000017526MSI1100100.000Equus_caballus
ENSMICG00000033181MSI19481.416ENSELUG00000023280-10081.121Esox_lucius
ENSMICG00000033181MSI19480.387ENSELUG00000023219MSI19280.387Esox_lucius
ENSMICG00000033181MSI1100100.000ENSFCAG00000011007MSI1100100.000Felis_catus
ENSMICG00000033181MSI19895.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSMICG00000033181MSI19899.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSMICG00000033181MSI110083.791ENSFHEG00000003560-10083.791Fundulus_heteroclitus
ENSMICG00000033181MSI110084.530ENSFHEG00000022446MSI110084.530Fundulus_heteroclitus
ENSMICG00000033181MSI110076.584ENSGMOG00000017838-10076.584Gadus_morhua
ENSMICG00000033181MSI110082.597ENSGMOG00000001006MSI19982.320Gadus_morhua
ENSMICG00000033181MSI19495.238ENSGALG00000007227MSI19886.957Gallus_gallus
ENSMICG00000033181MSI110065.833ENSGAFG00000005860-10065.833Gambusia_affinis
ENSMICG00000033181MSI19885.380ENSGAFG00000021522MSI19485.380Gambusia_affinis
ENSMICG00000033181MSI110083.425ENSGACG00000012679MSI110083.425Gasterosteus_aculeatus
ENSMICG00000033181MSI110080.663ENSGACG00000008674-10080.663Gasterosteus_aculeatus
ENSMICG00000033181MSI110095.580ENSGAGG00000016037MSI110095.580Gopherus_agassizii
ENSMICG00000033181MSI194100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSMICG00000033181MSI110083.978ENSHBUG00000011841-10083.978Haplochromis_burtoni
ENSMICG00000033181MSI110083.242ENSHBUG00000021921MSI110083.242Haplochromis_burtoni
ENSMICG00000033181MSI110099.724ENSHGLG00000012782MSI110099.724Heterocephalus_glaber_female
ENSMICG00000033181MSI19899.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSMICG00000033181MSI19881.845ENSHCOG00000012019MSI110081.845Hippocampus_comes
ENSMICG00000033181MSI110078.689ENSHCOG00000012067-10078.689Hippocampus_comes
ENSMICG00000033181MSI110082.320ENSIPUG00000001976msi110082.320Ictalurus_punctatus
ENSMICG00000033181MSI194100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSMICG00000033181MSI110085.632ENSJJAG00000010643-10085.632Jaculus_jaculus
ENSMICG00000033181MSI1100100.000ENSJJAG00000010463Msi1100100.000Jaculus_jaculus
ENSMICG00000033181MSI19884.524ENSKMAG00000019877-10084.524Kryptolebias_marmoratus
ENSMICG00000033181MSI110083.702ENSKMAG00000011251MSI110083.702Kryptolebias_marmoratus
ENSMICG00000033181MSI110083.242ENSLBEG00000001375-10083.242Labrus_bergylta
ENSMICG00000033181MSI110084.254ENSLBEG00000008789MSI110084.254Labrus_bergylta
ENSMICG00000033181MSI19887.427ENSLACG00000018287MSI110087.427Latimeria_chalumnae
ENSMICG00000033181MSI15270.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSMICG00000033181MSI19189.426ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSMICG00000033181MSI198100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSMICG00000033181MSI19798.291ENSMMUG00000031527MSI19798.291Macaca_mulatta
ENSMICG00000033181MSI1100100.000ENSMNEG00000040034MSI1100100.000Macaca_nemestrina
ENSMICG00000033181MSI198100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSMICG00000033181MSI110083.425ENSMAMG00000002279MSI110083.425Mastacembelus_armatus
ENSMICG00000033181MSI19685.960ENSMAMG00000018426-10083.791Mastacembelus_armatus
ENSMICG00000033181MSI110083.978ENSMZEG00005000340-10083.978Maylandia_zebra
ENSMICG00000033181MSI110083.242ENSMZEG00005026892MSI110083.242Maylandia_zebra
ENSMICG00000033181MSI16798.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSMICG00000033181MSI174100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSMICG00000033181MSI110099.724ENSMOCG00000002286Msi110099.724Microtus_ochrogaster
ENSMICG00000033181MSI19879.573ENSMMOG00000010492MSI19479.573Mola_mola
ENSMICG00000033181MSI19882.515ENSMMOG00000012265-9782.515Mola_mola
ENSMICG00000033181MSI19168.072ENSMODG00000003189-10068.072Monodelphis_domestica
ENSMICG00000033181MSI19885.044ENSMALG00000001426-10085.044Monopterus_albus
ENSMICG00000033181MSI110083.978ENSMALG00000017889MSI110083.978Monopterus_albus
ENSMICG00000033181MSI110099.448MGP_CAROLIEiJ_G0027626Msi110099.448Mus_caroli
ENSMICG00000033181MSI110099.448ENSMUSG00000054256Msi110099.448Mus_musculus
ENSMICG00000033181MSI110099.171MGP_PahariEiJ_G0024206Msi110099.171Mus_pahari
ENSMICG00000033181MSI110099.448MGP_SPRETEiJ_G0028624Msi110099.448Mus_spretus
ENSMICG00000033181MSI194100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSMICG00000033181MSI19490.179ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSMICG00000033181MSI19893.855ENSNGAG00000014508Msi19793.855Nannospalax_galili
ENSMICG00000033181MSI110083.978ENSNBRG00000000841-10083.978Neolamprologus_brichardi
ENSMICG00000033181MSI18877.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSMICG00000033181MSI19189.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSMICG00000033181MSI19477.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSMICG00000033181MSI19492.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSMICG00000033181MSI198100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSMICG00000033181MSI110083.978ENSONIG00000011182MSI110083.978Oreochromis_niloticus
ENSMICG00000033181MSI110083.516ENSONIG00000019452-10083.516Oreochromis_niloticus
ENSMICG00000033181MSI19499.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSMICG00000033181MSI110084.530ENSORLG00000019978-10084.530Oryzias_latipes
ENSMICG00000033181MSI110083.791ENSORLG00000029593MSI110083.791Oryzias_latipes
ENSMICG00000033181MSI110083.791ENSORLG00020008266MSI19983.976Oryzias_latipes_hni
ENSMICG00000033181MSI110084.530ENSORLG00020001208-7184.530Oryzias_latipes_hni
ENSMICG00000033181MSI110084.530ENSORLG00015013672-7682.073Oryzias_latipes_hsok
ENSMICG00000033181MSI110083.791ENSORLG00015003916MSI110083.791Oryzias_latipes_hsok
ENSMICG00000033181MSI19886.842ENSOMEG00000002272-10084.615Oryzias_melastigma
ENSMICG00000033181MSI110084.807ENSOMEG00000017536MSI110084.807Oryzias_melastigma
ENSMICG00000033181MSI19995.604ENSOGAG00000003847MSI19995.604Otolemur_garnettii
ENSMICG00000033181MSI19496.061ENSOARG00000012097MSI110096.061Ovis_aries
ENSMICG00000033181MSI198100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSMICG00000033181MSI1100100.000ENSPPRG00000000370MSI1100100.000Panthera_pardus
ENSMICG00000033181MSI194100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSMICG00000033181MSI1100100.000ENSPTRG00000005531MSI1100100.000Pan_troglodytes
ENSMICG00000033181MSI110099.724ENSPANG00000006335MSI110099.724Papio_anubis
ENSMICG00000033181MSI110085.083ENSPKIG00000016497MSI110085.083Paramormyrops_kingsleyae
ENSMICG00000033181MSI19685.879ENSPKIG00000023575-10083.978Paramormyrops_kingsleyae
ENSMICG00000033181MSI18092.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSMICG00000033181MSI19893.598ENSPSIG00000011608-9393.598Pelodiscus_sinensis
ENSMICG00000033181MSI19473.030ENSPMGG00000007743-8974.018Periophthalmus_magnuspinnatus
ENSMICG00000033181MSI19482.716ENSPMGG00000000514MSI19782.716Periophthalmus_magnuspinnatus
ENSMICG00000033181MSI19994.958ENSPEMG00000010491Msi19994.958Peromyscus_maniculatus_bairdii
ENSMICG00000033181MSI110084.254ENSPFOG00000013113MSI110084.254Poecilia_formosa
ENSMICG00000033181MSI110083.791ENSPFOG00000008319-8683.791Poecilia_formosa
ENSMICG00000033181MSI110083.791ENSPLAG00000012431-9783.791Poecilia_latipinna
ENSMICG00000033181MSI110084.254ENSPLAG00000014025-10084.254Poecilia_latipinna
ENSMICG00000033181MSI110083.242ENSPMEG00000007025-9382.012Poecilia_mexicana
ENSMICG00000033181MSI110084.254ENSPMEG00000012796MSI110084.254Poecilia_mexicana
ENSMICG00000033181MSI16179.909ENSPREG00000014574-10079.909Poecilia_reticulata
ENSMICG00000033181MSI19879.083ENSPREG00000021416-9878.249Poecilia_reticulata
ENSMICG00000033181MSI110099.171ENSPPYG00000005027MSI110099.171Pongo_abelii
ENSMICG00000033181MSI19876.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSMICG00000033181MSI1100100.000ENSPCOG00000017341MSI1100100.000Propithecus_coquereli
ENSMICG00000033181MSI19882.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSMICG00000033181MSI110083.242ENSPNYG00000004379MSI110083.242Pundamilia_nyererei
ENSMICG00000033181MSI110083.978ENSPNYG00000002529-10083.978Pundamilia_nyererei
ENSMICG00000033181MSI110082.597ENSPNAG00000019337msi110082.597Pygocentrus_nattereri
ENSMICG00000033181MSI19499.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSMICG00000033181MSI194100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSMICG00000033181MSI19499.697ENSRROG00000041076MSI19399.697Rhinopithecus_roxellana
ENSMICG00000033181MSI198100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSMICG00000033181MSI19487.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSMICG00000033181MSI19886.842ENSSFOG00015014964-9586.842Scleropages_formosus
ENSMICG00000033181MSI19884.821ENSSFOG00015005350MSI110084.821Scleropages_formosus
ENSMICG00000033181MSI19485.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSMICG00000033181MSI19882.716ENSSMAG00000018824MSI19782.716Scophthalmus_maximus
ENSMICG00000033181MSI110084.254ENSSDUG00000001027MSI110084.254Seriola_dumerili
ENSMICG00000033181MSI110083.516ENSSDUG00000022697-10083.516Seriola_dumerili
ENSMICG00000033181MSI110084.254ENSSLDG00000016832MSI110084.254Seriola_lalandi_dorsalis
ENSMICG00000033181MSI19881.902ENSSLDG00000018706-9783.180Seriola_lalandi_dorsalis
ENSMICG00000033181MSI110095.028ENSSPUG00000015741MSI110095.028Sphenodon_punctatus
ENSMICG00000033181MSI15474.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSMICG00000033181MSI16073.333ENSSPAG00000014085-10073.333Stegastes_partitus
ENSMICG00000033181MSI19886.217ENSSPAG00000013098-10086.217Stegastes_partitus
ENSMICG00000033181MSI110099.724ENSSSCG00000029365MSI110099.724Sus_scrofa
ENSMICG00000033181MSI19896.784ENSTGUG00000009534MSI110096.784Taeniopygia_guttata
ENSMICG00000033181MSI15077.320ENSTRUG00000021586-9977.320Takifugu_rubripes
ENSMICG00000033181MSI18180.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSMICG00000033181MSI19479.683ENSTRUG00000015636-7979.683Takifugu_rubripes
ENSMICG00000033181MSI110080.627ENSTNIG00000011469MSI110080.627Tetraodon_nigroviridis
ENSMICG00000033181MSI19862.432ENSTNIG00000019814-9962.432Tetraodon_nigroviridis
ENSMICG00000033181MSI19489.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSMICG00000033181MSI19881.287ENSTTRG00000005663MSI110081.287Tursiops_truncatus
ENSMICG00000033181MSI16995.673ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSMICG00000033181MSI19493.569ENSUMAG00000006176MSI19093.569Ursus_maritimus
ENSMICG00000033181MSI19899.099ENSVVUG00000020993MSI110099.099Vulpes_vulpes
ENSMICG00000033181MSI110091.209ENSXETG00000012216msi110091.257Xenopus_tropicalis
ENSMICG00000033181MSI19472.700ENSXCOG00000017605MSI18972.700Xiphophorus_couchianus
ENSMICG00000033181MSI110084.254ENSXMAG00000027103MSI110074.725Xiphophorus_maculatus
ENSMICG00000033181MSI110083.516ENSXMAG00000018237-10083.516Xiphophorus_maculatus

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