EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000033304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: lupus La protein pseudogene
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 3267 bases
Position: chr8:73615160-73618426
Accession: 105879610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000020983	RRM_1	PF00076.22	8.6e-14	1	1
ENSMICP00000045962	RRM_1	PF00076.22	9.1e-14	1	1
ENSMICP00000045741	RRM_1	PF00076.22	9.4e-14	1	1
ENSMICP00000043035	RRM_1	PF00076.22	9.5e-14	1	1
ENSMICP00000020983	RRM_3	PF08777.11	2.4e-32	1	1
ENSMICP00000045741	RRM_3	PF08777.11	5.9e-32	1	1
ENSMICP00000045962	RRM_3	PF08777.11	4.2e-31	1	1
ENSMICP00000043035	RRM_3	PF08777.11	6e-30	1	1
ENSMICP00000020983	La	PF05383.17	8.9e-22	1	1
ENSMICP00000043035	La	PF05383.17	8.9e-22	1	1
ENSMICP00000045741	La	PF05383.17	9.1e-22	1	1
ENSMICP00000045962	La	PF05383.17	9.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000058459	-	1146	-	ENSMICP00000045741	381 (aa)	-	UPI000C2EB7D5
ENSMICT00000058875	-	1137	-	ENSMICP00000045962	378 (aa)	-	UPI000C2ECBBA
ENSMICT00000041216	-	1131	-	ENSMICP00000020983	376 (aa)	-	UPI000C2EC62D
ENSMICT00000060704	-	1170	-	ENSMICP00000043035	389 (aa)	-	UPI000C2EA7CB

Gene Model

Click here to download ENSMICG00000033304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000033304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000033304	-	95	93.011	ENSMICG00000028252	-	99	89.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000033304	-	95	90.617	ENSG00000138385	SSB	100	99.167	Homo_sapiens
ENSMICG00000033304	-	93	53.117	ENSAPOG00000003448	ssb	96	53.619	Acanthochromis_polyacanthus
ENSMICG00000033304	-	93	87.831	ENSAMEG00000010507	SSB	99	82.536	Ailuropoda_melanoleuca
ENSMICG00000033304	-	95	54.521	ENSACIG00000001738	ssb	97	54.521	Amphilophus_citrinellus
ENSMICG00000033304	-	93	53.117	ENSAOCG00000020398	ssb	96	53.887	Amphiprion_ocellaris
ENSMICG00000033304	-	93	53.388	ENSAPEG00000020395	ssb	96	54.155	Amphiprion_percula
ENSMICG00000033304	-	94	54.960	ENSATEG00000016884	ssb	98	53.299	Anabas_testudineus
ENSMICG00000033304	-	93	68.586	ENSAPLG00000006109	SSB	98	66.187	Anas_platyrhynchos
ENSMICG00000033304	-	93	64.011	ENSACAG00000017008	SSB	98	62.312	Anolis_carolinensis
ENSMICG00000033304	-	98	78.866	ENSANAG00000027195	-	98	79.345	Aotus_nancymaae
ENSMICG00000033304	-	97	51.436	ENSACLG00000010798	ssb	98	50.643	Astatotilapia_calliptera
ENSMICG00000033304	-	91	52.603	ENSAMXG00000012606	ssb	99	50.856	Astyanax_mexicanus
ENSMICG00000033304	-	98	87.113	ENSBTAG00000008716	SSB	98	86.398	Bos_taurus
ENSMICG00000033304	-	74	33.667	WBGene00016653	C44E4.4	91	31.781	Caenorhabditis_elegans
ENSMICG00000033304	-	98	87.629	ENSCJAG00000045073	SSB	98	88.413	Callithrix_jacchus
ENSMICG00000033304	-	99	85.533	ENSCAFG00000012418	SSB	99	85.644	Canis_familiaris
ENSMICG00000033304	-	99	85.533	ENSCAFG00020002900	SSB	99	85.644	Canis_lupus_dingo
ENSMICG00000033304	-	96	85.530	ENSCHIG00000022196	-	98	85.530	Capra_hircus
ENSMICG00000033304	-	98	86.856	ENSCHIG00000022624	-	98	86.650	Capra_hircus
ENSMICG00000033304	-	95	91.667	ENSTSYG00000000097	SSB	98	88.161	Carlito_syrichta
ENSMICG00000033304	-	98	87.629	ENSCPOG00000003338	SSB	98	88.161	Cavia_porcellus
ENSMICG00000033304	-	98	88.144	ENSCCAG00000035147	SSB	98	88.917	Cebus_capucinus
ENSMICG00000033304	-	96	67.506	ENSCATG00000036701	SSB	98	67.506	Cercocebus_atys
ENSMICG00000033304	-	98	67.742	ENSCATG00000042909	-	98	68.241	Cercocebus_atys
ENSMICG00000033304	-	98	87.371	ENSCLAG00000015617	-	98	87.657	Chinchilla_lanigera
ENSMICG00000033304	-	98	87.871	ENSCSAG00000015200	SSB	87	88.665	Chlorocebus_sabaeus
ENSMICG00000033304	-	96	82.741	ENSCSAG00000018390	-	100	82.741	Chlorocebus_sabaeus
ENSMICG00000033304	-	96	88.859	ENSCHOG00000007763	SSB	98	87.154	Choloepus_hoffmanni
ENSMICG00000033304	-	93	77.198	ENSCPBG00000006519	SSB	98	73.067	Chrysemys_picta_bellii
ENSMICG00000033304	-	98	87.371	ENSCANG00000027695	SSB	98	88.665	Colobus_angolensis_palliatus
ENSMICG00000033304	-	98	69.309	ENSCANG00000028838	-	97	68.719	Colobus_angolensis_palliatus
ENSMICG00000033304	-	97	82.677	ENSCANG00000033240	-	98	82.677	Colobus_angolensis_palliatus
ENSMICG00000033304	-	93	77.778	ENSCGRG00001024831	Ssb	98	74.564	Cricetulus_griseus_chok1gshd
ENSMICG00000033304	-	93	77.778	ENSCGRG00000005387	Ssb	98	74.564	Cricetulus_griseus_crigri
ENSMICG00000033304	-	93	53.514	ENSCSEG00000011599	ssb	97	52.185	Cynoglossus_semilaevis
ENSMICG00000033304	-	93	54.472	ENSCVAG00000021558	ssb	95	52.344	Cyprinodon_variegatus
ENSMICG00000033304	-	97	52.030	ENSDARG00000029252	ssb	99	52.778	Danio_rerio
ENSMICG00000033304	-	98	86.856	ENSDNOG00000013450	SSB	98	86.902	Dasypus_novemcinctus
ENSMICG00000033304	-	98	78.920	ENSDORG00000005543	Ssb	98	78.841	Dipodomys_ordii
ENSMICG00000033304	-	86	33.136	FBgn0011638	La	92	32.873	Drosophila_melanogaster
ENSMICG00000033304	-	94	43.814	ENSEBUG00000001237	ssb	95	44.330	Eptatretus_burgeri
ENSMICG00000033304	-	98	87.887	ENSEASG00005022835	SSB	99	87.407	Equus_asinus_asinus
ENSMICG00000033304	-	98	87.887	ENSECAG00000018495	SSB	98	89.844	Equus_caballus
ENSMICG00000033304	-	98	59.744	ENSEEUG00000008077	SSB	99	59.744	Erinaceus_europaeus
ENSMICG00000033304	-	91	57.851	ENSELUG00000020929	ssb	96	56.443	Esox_lucius
ENSMICG00000033304	-	94	90.541	ENSFCAG00000011601	SSB	98	87.940	Felis_catus
ENSMICG00000033304	-	93	72.603	ENSFALG00000000930	SSB	98	69.674	Ficedula_albicollis
ENSMICG00000033304	-	95	90.054	ENSFDAG00000000598	SSB	98	87.406	Fukomys_damarensis
ENSMICG00000033304	-	73	50.896	ENSFHEG00000003268	ssb	93	50.502	Fundulus_heteroclitus
ENSMICG00000033304	-	92	52.011	ENSGMOG00000002664	ssb	98	50.639	Gadus_morhua
ENSMICG00000033304	-	96	72.368	ENSGALG00000009677	SSB	98	69.750	Gallus_gallus
ENSMICG00000033304	-	93	52.446	ENSGAFG00000002749	ssb	99	49.626	Gambusia_affinis
ENSMICG00000033304	-	94	51.979	ENSGACG00000005107	ssb	94	52.208	Gasterosteus_aculeatus
ENSMICG00000033304	-	93	76.648	ENSGAGG00000007807	SSB	98	72.319	Gopherus_agassizii
ENSMICG00000033304	-	57	88.462	ENSGGOG00000023471	-	97	84.689	Gorilla_gorilla
ENSMICG00000033304	-	98	75.949	ENSGGOG00000024891	-	99	75.949	Gorilla_gorilla
ENSMICG00000033304	-	95	51.872	ENSHBUG00000006584	ssb	98	50.129	Haplochromis_burtoni
ENSMICG00000033304	-	93	88.483	ENSHGLG00000005832	-	97	84.718	Heterocephalus_glaber_female
ENSMICG00000033304	-	98	85.570	ENSHGLG00000017580	-	98	86.386	Heterocephalus_glaber_female
ENSMICG00000033304	-	93	82.787	ENSHGLG00000004478	-	98	79.699	Heterocephalus_glaber_female
ENSMICG00000033304	-	93	80.168	ENSHGLG00100008767	-	98	76.154	Heterocephalus_glaber_male
ENSMICG00000033304	-	98	85.570	ENSHGLG00100003084	-	98	86.386	Heterocephalus_glaber_male
ENSMICG00000033304	-	92	52.617	ENSHCOG00000019011	ssb	97	49.871	Hippocampus_comes
ENSMICG00000033304	-	93	54.865	ENSIPUG00000003681	SSB	98	52.764	Ictalurus_punctatus
ENSMICG00000033304	-	98	87.629	ENSSTOG00000008416	SSB	98	88.161	Ictidomys_tridecemlineatus
ENSMICG00000033304	-	96	76.962	ENSJJAG00000023158	-	98	74.817	Jaculus_jaculus
ENSMICG00000033304	-	96	66.841	ENSJJAG00000016250	-	98	66.841	Jaculus_jaculus
ENSMICG00000033304	-	97	52.727	ENSKMAG00000017317	ssb	97	51.134	Kryptolebias_marmoratus
ENSMICG00000033304	-	91	52.055	ENSLBEG00000017345	ssb	98	50.639	Labrus_bergylta
ENSMICG00000033304	-	93	64.658	ENSLACG00000014056	SSB	98	62.843	Latimeria_chalumnae
ENSMICG00000033304	-	93	63.587	ENSLOCG00000007933	ssb	97	60.354	Lepisosteus_oculatus
ENSMICG00000033304	-	95	84.536	ENSLAFG00000000867	-	98	82.126	Loxodonta_africana
ENSMICG00000033304	-	94	75.339	ENSLAFG00000028909	-	98	72.980	Loxodonta_africana
ENSMICG00000033304	-	76	69.257	ENSLAFG00000026721	-	99	69.257	Loxodonta_africana
ENSMICG00000033304	-	98	87.629	ENSMFAG00000039066	SSB	98	88.917	Macaca_fascicularis
ENSMICG00000033304	-	91	83.578	ENSMFAG00000041478	-	100	83.578	Macaca_fascicularis
ENSMICG00000033304	-	98	87.629	ENSMMUG00000023051	SSB	98	88.917	Macaca_mulatta
ENSMICG00000033304	-	96	64.474	ENSMMUG00000039889	-	98	63.421	Macaca_mulatta
ENSMICG00000033304	-	97	83.820	ENSMMUG00000011724	-	96	83.820	Macaca_mulatta
ENSMICG00000033304	-	91	83.578	ENSMNEG00000034698	-	100	83.578	Macaca_nemestrina
ENSMICG00000033304	-	96	76.866	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSMICG00000033304	-	97	69.973	ENSMLEG00000042644	-	98	69.973	Mandrillus_leucophaeus
ENSMICG00000033304	-	98	87.629	ENSMLEG00000035717	SSB	88	100.000	Mandrillus_leucophaeus
ENSMICG00000033304	-	93	55.978	ENSMAMG00000004800	ssb	98	53.671	Mastacembelus_armatus
ENSMICG00000033304	-	97	51.436	ENSMZEG00005005749	ssb	98	50.643	Maylandia_zebra
ENSMICG00000033304	-	93	74.176	ENSMGAG00000010328	SSB	98	69.500	Meleagris_gallopavo
ENSMICG00000033304	-	96	72.610	ENSMODG00000008227	-	98	71.960	Monodelphis_domestica
ENSMICG00000033304	-	93	70.977	ENSMODG00000019271	-	98	67.192	Monodelphis_domestica
ENSMICG00000033304	-	93	67.529	ENSMODG00000007027	-	98	64.304	Monodelphis_domestica
ENSMICG00000033304	-	97	53.562	ENSMALG00000008045	ssb	90	54.667	Monopterus_albus
ENSMICG00000033304	-	97	73.350	MGP_CAROLIEiJ_G0023629	-	98	92.222	Mus_caroli
ENSMICG00000033304	-	97	72.616	ENSMUSG00000068882	Ssb	98	92.222	Mus_musculus
ENSMICG00000033304	-	97	72.549	MGP_PahariEiJ_G0025081	-	98	92.222	Mus_pahari
ENSMICG00000033304	-	97	72.616	MGP_SPRETEiJ_G0024551	Ssb	98	92.222	Mus_spretus
ENSMICG00000033304	-	94	90.811	ENSMPUG00000000785	SSB	98	87.657	Mustela_putorius_furo
ENSMICG00000033304	-	94	84.675	ENSMLUG00000016316	SSB	98	82.641	Myotis_lucifugus
ENSMICG00000033304	-	97	51.309	ENSNBRG00000012661	ssb	98	49.735	Neolamprologus_brichardi
ENSMICG00000033304	-	98	87.887	ENSNLEG00000004958	SSB	98	89.169	Nomascus_leucogenys
ENSMICG00000033304	-	92	68.421	ENSNLEG00000028754	-	99	63.119	Nomascus_leucogenys
ENSMICG00000033304	-	62	80.242	ENSMEUG00000001650	-	100	80.242	Notamacropus_eugenii
ENSMICG00000033304	-	69	61.511	ENSOPRG00000008475	-	99	63.322	Ochotona_princeps
ENSMICG00000033304	-	89	86.236	ENSODEG00000004202	-	98	86.236	Octodon_degus
ENSMICG00000033304	-	97	51.571	ENSONIG00000008776	ssb	95	51.309	Oreochromis_niloticus
ENSMICG00000033304	-	93	80.495	ENSOANG00000008543	SSB	98	76.574	Ornithorhynchus_anatinus
ENSMICG00000033304	-	98	86.856	ENSOCUG00000010396	SSB	98	87.406	Oryctolagus_cuniculus
ENSMICG00000033304	-	99	53.250	ENSORLG00000017208	ssb	98	53.671	Oryzias_latipes
ENSMICG00000033304	-	83	59.295	ENSORLG00020022574	ssb	98	53.535	Oryzias_latipes_hni
ENSMICG00000033304	-	95	55.851	ENSORLG00015016592	ssb	98	53.418	Oryzias_latipes_hsok
ENSMICG00000033304	-	91	55.647	ENSOMEG00000003193	ssb	98	52.658	Oryzias_melastigma
ENSMICG00000033304	-	99	80.976	ENSOGAG00000029768	SSB	99	81.948	Otolemur_garnettii
ENSMICG00000033304	-	98	86.598	ENSOARG00000002906	SSB	98	86.146	Ovis_aries
ENSMICG00000033304	-	95	90.617	ENSPPAG00000042673	SSB	98	88.500	Pan_paniscus
ENSMICG00000033304	-	98	77.660	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSMICG00000033304	-	92	70.083	ENSPPAG00000006189	-	94	71.429	Pan_paniscus
ENSMICG00000033304	-	94	90.541	ENSPPRG00000006599	SSB	98	87.940	Panthera_pardus
ENSMICG00000033304	-	94	90.270	ENSPTIG00000011021	SSB	95	87.688	Panthera_tigris_altaica
ENSMICG00000033304	-	98	73.980	ENSPTRG00000042880	-	99	72.194	Pan_troglodytes
ENSMICG00000033304	-	95	90.617	ENSPTRG00000012620	SSB	98	88.500	Pan_troglodytes
ENSMICG00000033304	-	98	87.629	ENSPANG00000007440	SSB	98	88.917	Papio_anubis
ENSMICG00000033304	-	98	66.043	ENSPANG00000031877	-	98	64.103	Papio_anubis
ENSMICG00000033304	-	96	67.792	ENSPANG00000034126	-	98	67.792	Papio_anubis
ENSMICG00000033304	-	94	60.215	ENSPKIG00000019325	ssb	98	58.333	Paramormyrops_kingsleyae
ENSMICG00000033304	-	93	72.253	ENSPSIG00000002265	SSB	92	70.324	Pelodiscus_sinensis
ENSMICG00000033304	-	85	50.733	ENSPMGG00000020075	ssb	91	50.872	Periophthalmus_magnuspinnatus
ENSMICG00000033304	-	83	48.160	ENSPMAG00000002982	ssb	87	46.113	Petromyzon_marinus
ENSMICG00000033304	-	93	79.452	ENSPCIG00000028591	-	98	75.628	Phascolarctos_cinereus
ENSMICG00000033304	-	93	53.261	ENSPFOG00000009650	ssb	98	50.754	Poecilia_formosa
ENSMICG00000033304	-	93	53.261	ENSPLAG00000020498	ssb	92	54.743	Poecilia_latipinna
ENSMICG00000033304	-	93	52.717	ENSPMEG00000001051	ssb	98	50.503	Poecilia_mexicana
ENSMICG00000033304	-	93	52.717	ENSPREG00000003708	ssb	96	54.076	Poecilia_reticulata
ENSMICG00000033304	-	98	87.887	ENSPPYG00000012919	SSB	98	89.169	Pongo_abelii
ENSMICG00000033304	-	91	81.867	ENSPCAG00000010276	SSB	98	81.867	Procavia_capensis
ENSMICG00000033304	-	98	81.720	ENSPCOG00000023189	-	98	82.677	Propithecus_coquereli
ENSMICG00000033304	-	98	84.794	ENSPCOG00000015741	-	92	93.103	Propithecus_coquereli
ENSMICG00000033304	-	89	88.571	ENSPVAG00000006615	SSB	99	88.571	Pteropus_vampyrus
ENSMICG00000033304	-	97	51.436	ENSPNYG00000006444	ssb	98	50.643	Pundamilia_nyererei
ENSMICG00000033304	-	91	54.696	ENSPNAG00000011708	ssb	99	53.202	Pygocentrus_nattereri
ENSMICG00000033304	-	97	74.425	ENSRNOG00000011606	AABR07061825.1	97	74.425	Rattus_norvegicus
ENSMICG00000033304	-	97	73.515	ENSRNOG00000007998	Ssb	98	72.616	Rattus_norvegicus
ENSMICG00000033304	-	85	79.661	ENSRBIG00000041608	-	96	79.661	Rhinopithecus_bieti
ENSMICG00000033304	-	90	80.845	ENSRBIG00000041232	-	96	80.845	Rhinopithecus_bieti
ENSMICG00000033304	-	98	63.441	ENSRBIG00000029918	-	98	63.255	Rhinopithecus_bieti
ENSMICG00000033304	-	98	76.139	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSMICG00000033304	-	98	87.371	ENSRROG00000040346	SSB	98	88.665	Rhinopithecus_roxellana
ENSMICG00000033304	-	98	71.208	ENSRROG00000007149	-	98	72.613	Rhinopithecus_roxellana
ENSMICG00000033304	-	94	81.989	ENSRROG00000031684	-	98	81.989	Rhinopithecus_roxellana
ENSMICG00000033304	-	85	83.616	ENSRROG00000034102	-	96	78.462	Rhinopithecus_roxellana
ENSMICG00000033304	-	98	88.402	ENSSBOG00000027204	SSB	98	89.421	Saimiri_boliviensis_boliviensis
ENSMICG00000033304	-	93	79.178	ENSSHAG00000018062	SSB	98	75.628	Sarcophilus_harrisii
ENSMICG00000033304	-	94	60.484	ENSSFOG00015000550	ssb	98	59.701	Scleropages_formosus
ENSMICG00000033304	-	97	51.648	ENSSMAG00000013885	ssb	99	52.941	Scophthalmus_maximus
ENSMICG00000033304	-	94	54.155	ENSSDUG00000020117	ssb	98	52.152	Seriola_dumerili
ENSMICG00000033304	-	94	55.211	ENSSLDG00000002525	ssb	98	52.128	Seriola_lalandi_dorsalis
ENSMICG00000033304	-	89	79.143	ENSSARG00000007747	SSB	98	77.067	Sorex_araneus
ENSMICG00000033304	-	93	75.000	ENSSPUG00000012112	SSB	99	70.123	Sphenodon_punctatus
ENSMICG00000033304	-	95	53.457	ENSSPAG00000005696	ssb	96	54.155	Stegastes_partitus
ENSMICG00000033304	-	94	74.663	ENSSSCG00000015938	SSB	98	71.033	Sus_scrofa
ENSMICG00000033304	-	93	73.901	ENSTGUG00000007942	SSB	98	69.077	Taeniopygia_guttata
ENSMICG00000033304	-	94	54.447	ENSTRUG00000017839	ssb	98	52.041	Takifugu_rubripes
ENSMICG00000033304	-	93	55.738	ENSTNIG00000000915	ssb	99	55.858	Tetraodon_nigroviridis
ENSMICG00000033304	-	81	100.000	ENSTBEG00000009056	SSB	79	100.000	Tupaia_belangeri
ENSMICG00000033304	-	96	88.329	ENSTTRG00000002152	SSB	98	86.683	Tursiops_truncatus
ENSMICG00000033304	-	93	92.033	ENSUAMG00000027833	SSB	96	92.055	Ursus_americanus
ENSMICG00000033304	-	93	92.033	ENSUMAG00000013907	SSB	99	86.139	Ursus_maritimus
ENSMICG00000033304	-	95	90.323	ENSVPAG00000007183	SSB	98	86.146	Vicugna_pacos
ENSMICG00000033304	-	99	85.533	ENSVVUG00000016573	SSB	77	85.644	Vulpes_vulpes
ENSMICG00000033304	-	94	59.621	ENSXETG00000025402	ssb	87	61.622	Xenopus_tropicalis
ENSMICG00000033304	-	93	51.771	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSMICG00000033304	-	93	53.533	ENSXMAG00000004888	ssb	99	50.125	Xiphophorus_maculatus