EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000033371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolar RNA helicase 2 pseudogene
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 5000 bases
Position: chr12:36019557-36024556
Accession: 105856602
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000033044	GUCT	PF08152.12	8.3e-29	1	1
ENSMICP00000020440	GUCT	PF08152.12	8.5e-29	1	1
ENSMICP00000019519	ResIII	PF04851.15	1.1e-06	1	1
ENSMICP00000033044	ResIII	PF04851.15	2.6e-06	1	1
ENSMICP00000020440	ResIII	PF04851.15	2.7e-06	1	1
ENSMICP00000019519	DEAD	PF00270.29	1.4e-34	1	1
ENSMICP00000033044	DEAD	PF00270.29	5.7e-34	1	1
ENSMICP00000020440	DEAD	PF00270.29	5.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000034089	-	1059	-	ENSMICP00000019519	352 (aa)	-	UPI000C2ED232
ENSMICT00000052806	-	2196	-	ENSMICP00000033044	731 (aa)	-	UPI00085B2B19
ENSMICT00000044981	-	2226	-	ENSMICP00000020440	741 (aa)	-	UPI00085B3300

Gene Model

Click here to download ENSMICG00000033371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000033371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000033371	-	79	32.698	ENSMICG00000008994	-	61	34.444
ENSMICG00000033371	-	82	30.189	ENSMICG00000047072	-	59	31.643
ENSMICG00000033371	-	84	31.173	ENSMICG00000009267	DDX5	61	32.312
ENSMICG00000033371	-	84	33.438	ENSMICG00000017145	DDX43	65	35.328
ENSMICG00000033371	-	100	89.655	ENSMICG00000015112	-	100	89.655
ENSMICG00000033371	-	88	68.489	ENSMICG00000017539	DDX50	91	58.110
ENSMICG00000033371	-	84	30.960	ENSMICG00000011601	DDX17	75	31.348
ENSMICG00000033371	-	82	31.410	ENSMICG00000035071	DDX10	55	31.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000033371	-	100	80.995	ENSG00000165732	DDX21	100	81.259	Homo_sapiens
ENSMICG00000033371	-	88	65.465	ENSAPOG00000012269	ddx21	78	64.319	Acanthochromis_polyacanthus
ENSMICG00000033371	-	100	68.458	ENSAMEG00000017978	DDX21	100	68.107	Ailuropoda_melanoleuca
ENSMICG00000033371	-	87	66.465	ENSACIG00000006429	ddx21	82	64.878	Amphilophus_citrinellus
ENSMICG00000033371	-	88	65.766	ENSAOCG00000023174	ddx21	86	61.077	Amphiprion_ocellaris
ENSMICG00000033371	-	88	65.766	ENSAPEG00000007108	ddx21	86	61.077	Amphiprion_percula
ENSMICG00000033371	-	87	65.455	ENSATEG00000022194	ddx21	88	60.597	Anabas_testudineus
ENSMICG00000033371	-	87	69.091	ENSAPLG00000013022	-	92	62.848	Anas_platyrhynchos
ENSMICG00000033371	-	96	63.260	ENSACAG00000009829	DDX21	81	64.286	Anolis_carolinensis
ENSMICG00000033371	-	100	80.230	ENSANAG00000038109	DDX21	100	80.460	Aotus_nancymaae
ENSMICG00000033371	-	87	66.364	ENSACLG00000008248	ddx21	79	62.776	Astatotilapia_calliptera
ENSMICG00000033371	-	87	65.758	ENSAMXG00000009140	ddx21	86	60.674	Astyanax_mexicanus
ENSMICG00000033371	-	100	79.284	ENSBTAG00000014558	DDX21	100	78.900	Bos_taurus
ENSMICG00000033371	-	100	80.077	ENSCJAG00000012876	DDX21	100	79.821	Callithrix_jacchus
ENSMICG00000033371	-	100	78.880	ENSCAFG00000013791	DDX21	100	78.372	Canis_familiaris
ENSMICG00000033371	-	87	80.243	ENSCAFG00020025973	-	93	81.711	Canis_lupus_dingo
ENSMICG00000033371	-	100	59.120	ENSCHIG00000014104	-	92	58.603	Capra_hircus
ENSMICG00000033371	-	98	79.076	ENSCHIG00000000248	-	100	78.543	Capra_hircus
ENSMICG00000033371	-	100	53.756	ENSCHIG00000006053	-	91	52.720	Capra_hircus
ENSMICG00000033371	-	100	78.827	ENSTSYG00000011231	DDX21	100	78.444	Carlito_syrichta
ENSMICG00000033371	-	98	63.587	ENSCAPG00000005945	DDX21	97	59.677	Cavia_aperea
ENSMICG00000033371	-	98	79.348	ENSCPOG00000015479	DDX21	100	76.403	Cavia_porcellus
ENSMICG00000033371	-	100	80.485	ENSCCAG00000026288	DDX21	100	79.693	Cebus_capucinus
ENSMICG00000033371	-	100	67.790	ENSCATG00000045019	-	100	68.421	Cercocebus_atys
ENSMICG00000033371	-	100	79.847	ENSCATG00000043540	DDX21	100	79.592	Cercocebus_atys
ENSMICG00000033371	-	98	80.707	ENSCLAG00000012235	DDX21	100	77.349	Chinchilla_lanigera
ENSMICG00000033371	-	99	73.351	ENSCHOG00000000234	DDX21	99	73.221	Choloepus_hoffmanni
ENSMICG00000033371	-	97	64.706	ENSCPBG00000019937	-	79	66.460	Chrysemys_picta_bellii
ENSMICG00000033371	-	99	66.667	ENSCPBG00000019934	-	90	65.777	Chrysemys_picta_bellii
ENSMICG00000033371	-	100	79.847	ENSCANG00000039926	DDX21	100	79.209	Colobus_angolensis_palliatus
ENSMICG00000033371	-	100	68.594	ENSCANG00000036110	-	100	68.857	Colobus_angolensis_palliatus
ENSMICG00000033371	-	99	77.005	ENSCGRG00001016264	-	99	73.616	Cricetulus_griseus_chok1gshd
ENSMICG00000033371	-	98	72.358	ENSCGRG00001017824	-	95	68.603	Cricetulus_griseus_chok1gshd
ENSMICG00000033371	-	99	77.005	ENSCGRG00000015134	-	99	73.616	Cricetulus_griseus_crigri
ENSMICG00000033371	-	98	72.358	ENSCGRG00000008450	-	95	68.603	Cricetulus_griseus_crigri
ENSMICG00000033371	-	87	66.465	ENSCSEG00000013939	ddx21	84	61.598	Cynoglossus_semilaevis
ENSMICG00000033371	-	87	64.048	ENSCVAG00000018333	ddx21	81	62.764	Cyprinodon_variegatus
ENSMICG00000033371	-	94	64.507	ENSDARG00000063626	ddx21	81	62.673	Danio_rerio
ENSMICG00000033371	-	98	79.675	ENSDNOG00000001680	DDX21	99	76.471	Dasypus_novemcinctus
ENSMICG00000033371	-	98	79.891	ENSDORG00000002202	Ddx21	100	71.521	Dipodomys_ordii
ENSMICG00000033371	-	97	77.384	ENSETEG00000014073	DDX21	100	74.747	Echinops_telfairi
ENSMICG00000033371	-	100	76.981	ENSEASG00005015598	DDX21	100	76.730	Equus_asinus_asinus
ENSMICG00000033371	-	100	77.962	ENSECAG00000010810	DDX21	100	77.707	Equus_caballus
ENSMICG00000033371	-	99	70.588	ENSEEUG00000005959	DDX21	100	71.102	Erinaceus_europaeus
ENSMICG00000033371	-	98	60.598	ENSELUG00000018856	ddx21	86	61.061	Esox_lucius
ENSMICG00000033371	-	100	78.726	ENSFCAG00000002109	DDX21	100	78.344	Felis_catus
ENSMICG00000033371	-	87	69.789	ENSFALG00000013022	-	95	64.969	Ficedula_albicollis
ENSMICG00000033371	-	84	63.240	ENSFALG00000013043	-	91	59.171	Ficedula_albicollis
ENSMICG00000033371	-	100	79.209	ENSFDAG00000007401	DDX21	100	78.827	Fukomys_damarensis
ENSMICG00000033371	-	86	65.538	ENSFHEG00000019089	ddx21	99	53.836	Fundulus_heteroclitus
ENSMICG00000033371	-	83	64.038	ENSGMOG00000012354	ddx21	99	57.283	Gadus_morhua
ENSMICG00000033371	-	90	64.516	ENSGALG00000042254	-	90	62.583	Gallus_gallus
ENSMICG00000033371	-	97	66.489	ENSGALG00000004144	-	93	63.206	Gallus_gallus
ENSMICG00000033371	-	92	62.464	ENSGAFG00000003427	ddx21	87	60.518	Gambusia_affinis
ENSMICG00000033371	-	87	64.545	ENSGACG00000016060	ddx21	99	59.545	Gasterosteus_aculeatus
ENSMICG00000033371	-	97	61.741	ENSGAGG00000022169	-	91	64.154	Gopherus_agassizii
ENSMICG00000033371	-	99	65.879	ENSGAGG00000022163	-	84	64.852	Gopherus_agassizii
ENSMICG00000033371	-	100	80.867	ENSGGOG00000005065	DDX21	100	80.077	Gorilla_gorilla
ENSMICG00000033371	-	87	66.364	ENSHBUG00000017638	ddx21	79	62.618	Haplochromis_burtoni
ENSMICG00000033371	-	98	80.163	ENSHGLG00000013902	DDX21	100	78.344	Heterocephalus_glaber_female
ENSMICG00000033371	-	98	80.163	ENSHGLG00100015956	DDX21	100	78.344	Heterocephalus_glaber_male
ENSMICG00000033371	-	92	63.897	ENSHCOG00000014503	ddx21	88	61.350	Hippocampus_comes
ENSMICG00000033371	-	97	63.288	ENSIPUG00000006972	ddx21	83	62.598	Ictalurus_punctatus
ENSMICG00000033371	-	100	78.200	ENSSTOG00000011572	DDX21	100	78.074	Ictidomys_tridecemlineatus
ENSMICG00000033371	-	99	74.160	ENSJJAG00000014035	Ddx21	100	71.285	Jaculus_jaculus
ENSMICG00000033371	-	88	62.763	ENSKMAG00000020766	ddx21	81	62.171	Kryptolebias_marmoratus
ENSMICG00000033371	-	90	64.912	ENSLBEG00000001244	ddx21	86	60.574	Labrus_bergylta
ENSMICG00000033371	-	87	68.085	ENSLACG00000000658	DDX21	100	66.554	Latimeria_chalumnae
ENSMICG00000033371	-	87	64.848	ENSLOCG00000009123	ddx21	79	63.430	Lepisosteus_oculatus
ENSMICG00000033371	-	100	75.604	ENSLAFG00000007962	DDX21	100	75.604	Loxodonta_africana
ENSMICG00000033371	-	100	67.742	ENSMFAG00000033536	-	100	68.237	Macaca_fascicularis
ENSMICG00000033371	-	100	80.102	ENSMFAG00000044838	DDX21	100	79.055	Macaca_fascicularis
ENSMICG00000033371	-	100	70.395	ENSMMUG00000032331	-	100	70.619	Macaca_mulatta
ENSMICG00000033371	-	100	80.230	ENSMMUG00000001005	DDX21	100	79.183	Macaca_mulatta
ENSMICG00000033371	-	100	80.102	ENSMNEG00000032825	DDX21	100	79.055	Macaca_nemestrina
ENSMICG00000033371	-	100	67.925	ENSMLEG00000028215	-	100	68.556	Mandrillus_leucophaeus
ENSMICG00000033371	-	100	76.913	ENSMLEG00000028940	DDX21	100	76.658	Mandrillus_leucophaeus
ENSMICG00000033371	-	91	64.740	ENSMAMG00000019683	ddx21	85	62.279	Mastacembelus_armatus
ENSMICG00000033371	-	87	66.364	ENSMZEG00005011618	ddx21	84	62.776	Maylandia_zebra
ENSMICG00000033371	-	97	66.220	ENSMGAG00000004298	DDX21	97	63.817	Meleagris_gallopavo
ENSMICG00000033371	-	98	77.507	ENSMAUG00000011153	Ddx21	94	77.298	Mesocricetus_auratus
ENSMICG00000033371	-	98	76.965	ENSMOCG00000020855	Ddx21	100	73.427	Microtus_ochrogaster
ENSMICG00000033371	-	80	62.418	ENSMMOG00000015938	ddx21	91	65.560	Mola_mola
ENSMICG00000033371	-	99	70.479	ENSMODG00000010727	DDX21	100	61.644	Monodelphis_domestica
ENSMICG00000033371	-	98	55.827	ENSMALG00000010489	ddx21	97	57.943	Monopterus_albus
ENSMICG00000033371	-	98	76.757	MGP_CAROLIEiJ_G0015388	Ddx21	100	72.681	Mus_caroli
ENSMICG00000033371	-	100	77.761	ENSMUSG00000020075	Ddx21	82	74.028	Mus_musculus
ENSMICG00000033371	-	100	77.614	MGP_SPRETEiJ_G0016199	Ddx21	80	78.604	Mus_spretus
ENSMICG00000033371	-	100	77.358	ENSMPUG00000004603	DDX21	100	76.855	Mustela_putorius_furo
ENSMICG00000033371	-	98	77.027	ENSMLUG00000023298	DDX21	99	74.142	Myotis_lucifugus
ENSMICG00000033371	-	100	75.285	ENSNGAG00000022273	Ddx21	100	75.158	Nannospalax_galili
ENSMICG00000033371	-	87	66.364	ENSNBRG00000006198	ddx21	84	62.916	Neolamprologus_brichardi
ENSMICG00000033371	-	100	81.378	ENSNLEG00000011591	DDX21	100	81.538	Nomascus_leucogenys
ENSMICG00000033371	-	98	68.835	ENSOPRG00000001640	DDX21	100	68.523	Ochotona_princeps
ENSMICG00000033371	-	98	66.033	ENSODEG00000012879	-	99	63.624	Octodon_degus
ENSMICG00000033371	-	87	66.061	ENSONIG00000005499	ddx21	79	62.717	Oreochromis_niloticus
ENSMICG00000033371	-	99	65.172	ENSOANG00000004777	DDX21	99	58.696	Ornithorhynchus_anatinus
ENSMICG00000033371	-	96	74.380	ENSOCUG00000002888	DDX21	93	83.333	Oryctolagus_cuniculus
ENSMICG00000033371	-	88	64.565	ENSORLG00000010122	ddx21	98	61.374	Oryzias_latipes
ENSMICG00000033371	-	88	64.264	ENSORLG00020004409	ddx21	97	61.069	Oryzias_latipes_hni
ENSMICG00000033371	-	88	64.565	ENSORLG00015000051	ddx21	98	61.374	Oryzias_latipes_hsok
ENSMICG00000033371	-	93	62.393	ENSOMEG00000004523	ddx21	85	60.241	Oryzias_melastigma
ENSMICG00000033371	-	99	70.968	ENSOGAG00000031242	-	99	74.833	Otolemur_garnettii
ENSMICG00000033371	-	97	83.333	ENSOGAG00000001846	-	91	82.935	Otolemur_garnettii
ENSMICG00000033371	-	100	79.490	ENSOARG00000005307	DDX21	100	79.082	Ovis_aries
ENSMICG00000033371	-	100	80.995	ENSPPAG00000036670	DDX21	100	80.587	Pan_paniscus
ENSMICG00000033371	-	100	78.854	ENSPPRG00000012523	DDX21	100	78.471	Panthera_pardus
ENSMICG00000033371	-	100	78.599	ENSPTIG00000007268	DDX21	100	78.217	Panthera_tigris_altaica
ENSMICG00000033371	-	100	81.122	ENSPTRG00000002563	DDX21	100	80.332	Pan_troglodytes
ENSMICG00000033371	-	100	67.520	ENSPANG00000031334	-	100	68.151	Papio_anubis
ENSMICG00000033371	-	100	80.102	ENSPANG00000022140	DDX21	100	79.464	Papio_anubis
ENSMICG00000033371	-	93	64.571	ENSPKIG00000014660	ddx21	86	60.620	Paramormyrops_kingsleyae
ENSMICG00000033371	-	98	63.298	ENSPSIG00000004724	DDX21	95	64.697	Pelodiscus_sinensis
ENSMICG00000033371	-	86	65.846	ENSPMGG00000000721	ddx21	95	67.761	Periophthalmus_magnuspinnatus
ENSMICG00000033371	-	98	77.507	ENSPEMG00000018513	Ddx21	100	75.349	Peromyscus_maniculatus_bairdii
ENSMICG00000033371	-	98	71.123	ENSPCIG00000015505	DDX21	98	64.891	Phascolarctos_cinereus
ENSMICG00000033371	-	92	62.464	ENSPFOG00000016196	ddx21	82	60.671	Poecilia_formosa
ENSMICG00000033371	-	80	64.169	ENSPLAG00000017849	ddx21	83	63.700	Poecilia_latipinna
ENSMICG00000033371	-	92	62.464	ENSPMEG00000014571	ddx21	82	60.611	Poecilia_mexicana
ENSMICG00000033371	-	100	81.250	ENSPPYG00000002389	DDX21	100	80.843	Pongo_abelii
ENSMICG00000033371	-	98	73.913	ENSPCAG00000016697	DDX21	100	72.126	Procavia_capensis
ENSMICG00000033371	-	99	84.759	ENSPCOG00000019284	DDX21	100	83.184	Propithecus_coquereli
ENSMICG00000033371	-	100	78.471	ENSPVAG00000009521	DDX21	100	78.599	Pteropus_vampyrus
ENSMICG00000033371	-	80	66.118	ENSPNYG00000015566	ddx21	97	62.075	Pundamilia_nyererei
ENSMICG00000033371	-	98	61.351	ENSPNAG00000004814	ddx21	94	58.258	Pygocentrus_nattereri
ENSMICG00000033371	-	98	76.694	ENSRNOG00000043099	Ddx21	100	74.809	Rattus_norvegicus
ENSMICG00000033371	-	98	76.423	ENSRNOG00000048990	AABR07037356.1	100	74.936	Rattus_norvegicus
ENSMICG00000033371	-	100	74.935	ENSRBIG00000035862	-	100	74.252	Rhinopithecus_bieti
ENSMICG00000033371	-	100	80.357	ENSRBIG00000043721	-	100	79.719	Rhinopithecus_bieti
ENSMICG00000033371	-	100	79.974	ENSRROG00000033387	DDX21	100	79.337	Rhinopithecus_roxellana
ENSMICG00000033371	-	85	77.000	ENSSBOG00000024156	-	88	77.152	Saimiri_boliviensis_boliviensis
ENSMICG00000033371	-	97	64.850	ENSSBOG00000025801	-	99	60.818	Saimiri_boliviensis_boliviensis
ENSMICG00000033371	-	96	65.651	ENSSFOG00015014610	ddx21	98	62.305	Scleropages_formosus
ENSMICG00000033371	-	86	63.497	ENSSMAG00000003932	ddx21	86	60.245	Scophthalmus_maximus
ENSMICG00000033371	-	87	65.455	ENSSDUG00000021420	ddx21	88	60.268	Seriola_dumerili
ENSMICG00000033371	-	89	64.583	ENSSLDG00000025665	ddx21	95	63.415	Seriola_lalandi_dorsalis
ENSMICG00000033371	-	67	75.362	ENSSARG00000014024	-	69	75.362	Sorex_araneus
ENSMICG00000033371	-	89	67.560	ENSSPUG00000004088	DDX21	87	66.029	Sphenodon_punctatus
ENSMICG00000033371	-	87	65.257	ENSSPAG00000013142	ddx21	88	60.060	Stegastes_partitus
ENSMICG00000033371	-	100	79.337	ENSSSCG00000010247	DDX21	100	79.082	Sus_scrofa
ENSMICG00000033371	-	86	71.077	ENSTGUG00000003810	-	95	65.084	Taeniopygia_guttata
ENSMICG00000033371	-	87	65.861	ENSTRUG00000017570	ddx21	82	65.109	Takifugu_rubripes
ENSMICG00000033371	-	86	66.154	ENSTNIG00000013798	ddx21	99	64.638	Tetraodon_nigroviridis
ENSMICG00000033371	-	98	80.441	ENSTBEG00000002310	DDX21	100	71.558	Tupaia_belangeri
ENSMICG00000033371	-	100	78.089	ENSTTRG00000016398	DDX21	100	77.452	Tursiops_truncatus
ENSMICG00000033371	-	100	78.463	ENSUMAG00000007735	DDX21	100	77.708	Ursus_maritimus
ENSMICG00000033371	-	98	78.804	ENSVPAG00000000627	DDX21	99	79.853	Vicugna_pacos
ENSMICG00000033371	-	100	77.960	ENSVVUG00000020486	DDX21	100	77.708	Vulpes_vulpes
ENSMICG00000033371	-	80	63.518	ENSXCOG00000009654	ddx21	80	62.827	Xiphophorus_couchianus
ENSMICG00000033371	-	92	61.891	ENSXMAG00000008199	ddx21	92	57.011	Xiphophorus_maculatus