EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000034286 (Gene tree)
Gene ID: 105876673
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 1447510 bases
Position: chr17:5512127-6959636
Accession: 105876673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000018428	Fox-1_C	PF12414.8	9.7e-43	1	1
ENSMICP00000031116	Fox-1_C	PF12414.8	1.6e-42	1	1
ENSMICP00000024007	Fox-1_C	PF12414.8	2.4e-40	1	1
ENSMICP00000028891	Fox-1_C	PF12414.8	2.5e-40	1	1
ENSMICP00000003064	Fox-1_C	PF12414.8	3.3e-40	1	1
ENSMICP00000044735	Fox-1_C	PF12414.8	2.7e-38	1	1
ENSMICP00000048856	Fox-1_C	PF12414.8	2.9e-38	1	1
ENSMICP00000045344	Fox-1_C	PF12414.8	3.1e-38	1	1
ENSMICP00000048902	Fox-1_C	PF12414.8	3.1e-38	1	1
ENSMICP00000047175	Fox-1_C	PF12414.8	1.7e-21	1	1
ENSMICP00000044735	RRM_1	PF00076.22	3.2e-18	1	1
ENSMICP00000048856	RRM_1	PF00076.22	3.6e-18	1	1
ENSMICP00000018428	RRM_1	PF00076.22	3.9e-18	1	1
ENSMICP00000045344	RRM_1	PF00076.22	3.9e-18	1	1
ENSMICP00000048902	RRM_1	PF00076.22	3.9e-18	1	1
ENSMICP00000031116	RRM_1	PF00076.22	4.6e-18	1	1
ENSMICP00000003064	RRM_1	PF00076.22	5.3e-18	1	1
ENSMICP00000047175	RRM_1	PF00076.22	5.7e-18	1	1
ENSMICP00000028891	RRM_1	PF00076.22	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000062652	RBFOX1-206	2643	-	ENSMICP00000045344	414 (aa)	-	UPI00064346F6
ENSMICT00000027324	RBFOX1-204	1143	-	ENSMICP00000024007	380 (aa)	-	UPI000C2EC226
ENSMICT00000003370	RBFOX1-201	1401	XM_020281700	ENSMICP00000003064	466 (aa)	XP_020137289	UPI000C2EB656
ENSMICT00000064167	RBFOX1-205	4206	-	ENSMICP00000048902	415 (aa)	-	UPI000C2EC12C
ENSMICT00000043710	RBFOX1-202	1278	XM_020281701	ENSMICP00000031116	425 (aa)	XP_020137290	UPI00098AA07B
ENSMICT00000064290	RBFOX1-209	1982	-	ENSMICP00000044735	377 (aa)	-	UPI00085AF679
ENSMICT00000062120	RBFOX1-207	2036	XM_012774420	ENSMICP00000048856	395 (aa)	XP_012629874	UPI000642ACF8
ENSMICT00000068798	RBFOX1-210	1422	-	ENSMICP00000047175	473 (aa)	-	UPI000C2EB10D
ENSMICT00000035344	RBFOX1-208	1128	XM_020281707	ENSMICP00000018428	375 (aa)	XP_020137296	UPI000C2EAD3A
ENSMICT00000051732	RBFOX1-203	1176	-	ENSMICP00000028891	391 (aa)	-	UPI000C2EB259

Gene Model

Click here to download ENSMICG00000034286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000034286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000034286	RBFOX1	80	54.808	ENSMICG00000046341	-	75	54.576
ENSMICG00000034286	RBFOX1	97	62.745	ENSMICG00000035417	RBFOX2	96	64.815
ENSMICG00000034286	RBFOX1	88	74.251	ENSMICG00000014898	RBFOX3	100	76.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000034286	RBFOX1	100	99.233	ENSG00000078328	RBFOX1	100	99.240	Homo_sapiens
ENSMICG00000034286	RBFOX1	99	79.847	ENSAPOG00000003197	rbfox1	98	81.102	Acanthochromis_polyacanthus
ENSMICG00000034286	RBFOX1	63	95.200	ENSAMEG00000008605	RBFOX1	100	95.200	Ailuropoda_melanoleuca
ENSMICG00000034286	RBFOX1	64	71.375	ENSACIG00000005478	rbfox1	78	65.161	Amphilophus_citrinellus
ENSMICG00000034286	RBFOX1	79	70.032	ENSAOCG00000008283	rbfox1	96	77.500	Amphiprion_ocellaris
ENSMICG00000034286	RBFOX1	93	71.117	ENSAPEG00000010636	rbfox1	100	71.003	Amphiprion_percula
ENSMICG00000034286	RBFOX1	78	70.468	ENSATEG00000007513	rbfox1	97	75.352	Anabas_testudineus
ENSMICG00000034286	RBFOX1	97	87.980	ENSAPLG00000013263	RBFOX1	98	87.980	Anas_platyrhynchos
ENSMICG00000034286	RBFOX1	97	84.949	ENSACAG00000004013	RBFOX1	98	84.949	Anolis_carolinensis
ENSMICG00000034286	RBFOX1	100	99.233	ENSANAG00000029527	RBFOX1	100	99.233	Aotus_nancymaae
ENSMICG00000034286	RBFOX1	62	87.451	ENSAMXG00000002431	rbfox1	73	87.451	Astyanax_mexicanus
ENSMICG00000034286	RBFOX1	100	98.674	ENSBTAG00000007210	RBFOX1	100	98.674	Bos_taurus
ENSMICG00000034286	RBFOX1	100	98.977	ENSCJAG00000017351	RBFOX1	100	98.977	Callithrix_jacchus
ENSMICG00000034286	RBFOX1	100	98.734	ENSCAFG00000019082	RBFOX1	100	98.734	Canis_familiaris
ENSMICG00000034286	RBFOX1	100	85.063	ENSCAFG00020024881	RBFOX1	99	85.316	Canis_lupus_dingo
ENSMICG00000034286	RBFOX1	100	98.674	ENSCHIG00000023549	RBFOX1	100	98.674	Capra_hircus
ENSMICG00000034286	RBFOX1	96	98.892	ENSTSYG00000005334	RBFOX1	100	98.928	Carlito_syrichta
ENSMICG00000034286	RBFOX1	100	88.834	ENSCAPG00000017669	RBFOX1	100	90.979	Cavia_aperea
ENSMICG00000034286	RBFOX1	100	88.834	ENSCPOG00000011314	RBFOX1	99	90.513	Cavia_porcellus
ENSMICG00000034286	RBFOX1	100	98.667	ENSCCAG00000023031	RBFOX1	100	99.533	Cebus_capucinus
ENSMICG00000034286	RBFOX1	100	99.233	ENSCATG00000033816	RBFOX1	100	99.233	Cercocebus_atys
ENSMICG00000034286	RBFOX1	100	95.756	ENSCLAG00000012761	RBFOX1	100	95.756	Chinchilla_lanigera
ENSMICG00000034286	RBFOX1	100	97.347	ENSCSAG00000008739	RBFOX1	100	97.347	Chlorocebus_sabaeus
ENSMICG00000034286	RBFOX1	74	96.923	ENSCHOG00000012843	RBFOX1	66	96.923	Choloepus_hoffmanni
ENSMICG00000034286	RBFOX1	100	92.042	ENSCPBG00000026626	RBFOX1	100	92.042	Chrysemys_picta_bellii
ENSMICG00000034286	RBFOX1	100	99.233	ENSCANG00000033125	RBFOX1	100	99.233	Colobus_angolensis_palliatus
ENSMICG00000034286	RBFOX1	100	88.586	ENSCGRG00001013729	Rbfox1	98	90.256	Cricetulus_griseus_chok1gshd
ENSMICG00000034286	RBFOX1	100	88.586	ENSCGRG00000003272	Rbfox1	98	90.256	Cricetulus_griseus_crigri
ENSMICG00000034286	RBFOX1	93	75.946	ENSCSEG00000008840	rbfox1	100	75.946	Cynoglossus_semilaevis
ENSMICG00000034286	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSMICG00000034286	RBFOX1	97	91.538	ENSDNOG00000043612	RBFOX1	94	91.538	Dasypus_novemcinctus
ENSMICG00000034286	RBFOX1	97	89.031	ENSDORG00000010024	Rbfox1	100	93.316	Dipodomys_ordii
ENSMICG00000034286	RBFOX1	100	75.931	ENSETEG00000003771	RBFOX1	96	75.931	Echinops_telfairi
ENSMICG00000034286	RBFOX1	100	98.734	ENSEASG00005011599	RBFOX1	100	98.734	Equus_asinus_asinus
ENSMICG00000034286	RBFOX1	100	98.481	ENSECAG00000012667	RBFOX1	100	98.481	Equus_caballus
ENSMICG00000034286	RBFOX1	100	54.111	ENSELUG00000013096	rbfox1	100	53.316	Esox_lucius
ENSMICG00000034286	RBFOX1	100	98.792	ENSFCAG00000025322	RBFOX1	100	98.465	Felis_catus
ENSMICG00000034286	RBFOX1	86	91.975	ENSFALG00000004027	RBFOX1	100	92.192	Ficedula_albicollis
ENSMICG00000034286	RBFOX1	100	89.330	ENSFDAG00000007388	RBFOX1	98	91.026	Fukomys_damarensis
ENSMICG00000034286	RBFOX1	100	91.063	ENSGALG00000034325	RBFOX1	100	91.579	Gallus_gallus
ENSMICG00000034286	RBFOX1	100	93.369	ENSGAGG00000023681	RBFOX1	100	93.369	Gopherus_agassizii
ENSMICG00000034286	RBFOX1	100	99.233	ENSGGOG00000016871	-	100	99.233	Gorilla_gorilla
ENSMICG00000034286	RBFOX1	100	95.491	ENSHGLG00000016944	RBFOX1	100	95.491	Heterocephalus_glaber_female
ENSMICG00000034286	RBFOX1	100	95.491	ENSHGLG00100003272	RBFOX1	100	95.491	Heterocephalus_glaber_male
ENSMICG00000034286	RBFOX1	83	76.250	ENSHCOG00000016419	rbfox1	91	76.250	Hippocampus_comes
ENSMICG00000034286	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSMICG00000034286	RBFOX1	100	94.960	ENSSTOG00000000322	RBFOX1	100	94.960	Ictidomys_tridecemlineatus
ENSMICG00000034286	RBFOX1	100	86.600	ENSJJAG00000002575	Rbfox1	98	87.692	Jaculus_jaculus
ENSMICG00000034286	RBFOX1	93	78.804	ENSLBEG00000014659	rbfox1	97	78.804	Labrus_bergylta
ENSMICG00000034286	RBFOX1	98	85.139	ENSLOCG00000006675	rbfox1	99	85.533	Lepisosteus_oculatus
ENSMICG00000034286	RBFOX1	75	90.260	ENSLAFG00000011480	RBFOX1	100	90.260	Loxodonta_africana
ENSMICG00000034286	RBFOX1	100	98.977	ENSMFAG00000036447	RBFOX1	100	98.977	Macaca_fascicularis
ENSMICG00000034286	RBFOX1	100	98.977	ENSMMUG00000003458	RBFOX1	100	98.977	Macaca_mulatta
ENSMICG00000034286	RBFOX1	100	98.977	ENSMNEG00000032034	RBFOX1	100	98.977	Macaca_nemestrina
ENSMICG00000034286	RBFOX1	100	99.233	ENSMLEG00000015382	RBFOX1	100	99.324	Mandrillus_leucophaeus
ENSMICG00000034286	RBFOX1	93	80.274	ENSMAMG00000003142	rbfox1	100	80.822	Mastacembelus_armatus
ENSMICG00000034286	RBFOX1	77	88.660	ENSMGAG00000008606	RBFOX1	98	88.462	Meleagris_gallopavo
ENSMICG00000034286	RBFOX1	95	53.763	ENSMAUG00000020570	Rbfox1	96	52.957	Mesocricetus_auratus
ENSMICG00000034286	RBFOX1	100	88.586	ENSMOCG00000020932	Rbfox1	100	90.625	Microtus_ochrogaster
ENSMICG00000034286	RBFOX1	84	76.730	ENSMMOG00000009716	rbfox1	86	77.564	Mola_mola
ENSMICG00000034286	RBFOX1	94	94.930	ENSMODG00000005826	RBFOX1	100	97.175	Monodelphis_domestica
ENSMICG00000034286	RBFOX1	99	80.570	ENSMALG00000003337	rbfox1	98	81.333	Monopterus_albus
ENSMICG00000034286	RBFOX1	100	94.695	MGP_CAROLIEiJ_G0020427	Rbfox1	100	93.995	Mus_caroli
ENSMICG00000034286	RBFOX1	100	88.586	ENSMUSG00000008658	Rbfox1	100	97.241	Mus_musculus
ENSMICG00000034286	RBFOX1	100	94.430	MGP_PahariEiJ_G0016135	Rbfox1	100	93.533	Mus_pahari
ENSMICG00000034286	RBFOX1	100	94.164	MGP_SPRETEiJ_G0021321	Rbfox1	100	93.533	Mus_spretus
ENSMICG00000034286	RBFOX1	100	96.203	ENSMPUG00000014822	RBFOX1	100	96.203	Mustela_putorius_furo
ENSMICG00000034286	RBFOX1	75	90.554	ENSMLUG00000015896	RBFOX1	100	90.554	Myotis_lucifugus
ENSMICG00000034286	RBFOX1	100	89.330	ENSNGAG00000023276	Rbfox1	100	91.495	Nannospalax_galili
ENSMICG00000034286	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSMICG00000034286	RBFOX1	100	98.667	ENSNLEG00000010017	-	100	98.667	Nomascus_leucogenys
ENSMICG00000034286	RBFOX1	79	96.923	ENSMEUG00000012525	RBFOX1	71	96.923	Notamacropus_eugenii
ENSMICG00000034286	RBFOX1	88	96.522	ENSOPRG00000006199	-	79	96.522	Ochotona_princeps
ENSMICG00000034286	RBFOX1	100	88.586	ENSODEG00000013166	RBFOX1	98	90.488	Octodon_degus
ENSMICG00000034286	RBFOX1	100	93.899	ENSOANG00000002379	RBFOX1	100	93.899	Ornithorhynchus_anatinus
ENSMICG00000034286	RBFOX1	58	96.313	ENSOCUG00000001205	-	100	93.778	Oryctolagus_cuniculus
ENSMICG00000034286	RBFOX1	97	92.051	ENSOGAG00000025535	RBFOX1	98	92.051	Otolemur_garnettii
ENSMICG00000034286	RBFOX1	59	92.641	ENSOARG00000005135	RBFOX1	99	92.641	Ovis_aries
ENSMICG00000034286	RBFOX1	100	99.233	ENSPPAG00000036238	-	100	99.454	Pan_paniscus
ENSMICG00000034286	RBFOX1	100	98.465	ENSPPRG00000006546	RBFOX1	100	98.465	Panthera_pardus
ENSMICG00000034286	RBFOX1	96	84.824	ENSPTIG00000021154	RBFOX1	99	84.469	Panthera_tigris_altaica
ENSMICG00000034286	RBFOX1	100	99.233	ENSPTRG00000007744	RBFOX1	100	99.233	Pan_troglodytes
ENSMICG00000034286	RBFOX1	100	99.233	ENSPANG00000026500	RBFOX1	100	99.233	Papio_anubis
ENSMICG00000034286	RBFOX1	80	83.389	ENSPKIG00000019353	rbfox1	86	91.698	Paramormyrops_kingsleyae
ENSMICG00000034286	RBFOX1	97	88.493	ENSPKIG00000009667	-	95	90.029	Paramormyrops_kingsleyae
ENSMICG00000034286	RBFOX1	97	88.175	ENSPSIG00000006523	RBFOX1	97	88.175	Pelodiscus_sinensis
ENSMICG00000034286	RBFOX1	100	88.834	ENSPEMG00000017607	Rbfox1	98	90.513	Peromyscus_maniculatus_bairdii
ENSMICG00000034286	RBFOX1	71	91.822	ENSPCIG00000026887	RBFOX1	100	90.823	Phascolarctos_cinereus
ENSMICG00000034286	RBFOX1	100	96.962	ENSPPYG00000007079	-	100	96.962	Pongo_abelii
ENSMICG00000034286	RBFOX1	91	87.500	ENSPCAG00000002630	RBFOX1	95	87.500	Procavia_capensis
ENSMICG00000034286	RBFOX1	100	99.733	ENSPCOG00000025687	RBFOX1	100	99.733	Propithecus_coquereli
ENSMICG00000034286	RBFOX1	100	85.112	ENSPVAG00000013467	RBFOX1	96	84.864	Pteropus_vampyrus
ENSMICG00000034286	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSMICG00000034286	RBFOX1	100	96.552	ENSRNOG00000002827	Rbfox1	100	96.552	Rattus_norvegicus
ENSMICG00000034286	RBFOX1	100	99.469	ENSRBIG00000044478	RBFOX1	100	99.517	Rhinopithecus_bieti
ENSMICG00000034286	RBFOX1	100	99.233	ENSRROG00000044411	RBFOX1	100	99.233	Rhinopithecus_roxellana
ENSMICG00000034286	RBFOX1	100	98.987	ENSSBOG00000033726	RBFOX1	100	98.987	Saimiri_boliviensis_boliviensis
ENSMICG00000034286	RBFOX1	97	89.487	ENSSHAG00000009257	RBFOX1	100	89.859	Sarcophilus_harrisii
ENSMICG00000034286	RBFOX1	89	74.487	ENSSFOG00015009955	-	87	74.487	Scleropages_formosus
ENSMICG00000034286	RBFOX1	97	76.796	ENSSFOG00015023675	rbfox1	97	76.519	Scleropages_formosus
ENSMICG00000034286	RBFOX1	99	81.074	ENSSMAG00000015505	rbfox1	95	80.818	Scophthalmus_maximus
ENSMICG00000034286	RBFOX1	97	79.348	ENSSDUG00000016413	rbfox1	99	79.452	Seriola_dumerili
ENSMICG00000034286	RBFOX1	84	77.116	ENSSLDG00000009353	rbfox1	95	77.815	Seriola_lalandi_dorsalis
ENSMICG00000034286	RBFOX1	83	89.137	ENSSPUG00000009732	RBFOX1	87	89.137	Sphenodon_punctatus
ENSMICG00000034286	RBFOX1	100	77.778	ENSSPAG00000009723	rbfox1	100	80.739	Stegastes_partitus
ENSMICG00000034286	RBFOX1	100	98.228	ENSSSCG00000007917	RBFOX1	100	98.588	Sus_scrofa
ENSMICG00000034286	RBFOX1	97	88.175	ENSTGUG00000004562	RBFOX1	100	88.175	Taeniopygia_guttata
ENSMICG00000034286	RBFOX1	97	80.475	ENSTRUG00000020940	rbfox1	99	80.739	Takifugu_rubripes
ENSMICG00000034286	RBFOX1	64	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSMICG00000034286	RBFOX1	63	100.000	ENSTBEG00000009169	-	56	100.000	Tupaia_belangeri
ENSMICG00000034286	RBFOX1	100	89.082	ENSTTRG00000005700	RBFOX1	96	89.082	Tursiops_truncatus
ENSMICG00000034286	RBFOX1	100	93.924	ENSUAMG00000024633	RBFOX1	99	93.924	Ursus_americanus
ENSMICG00000034286	RBFOX1	100	85.063	ENSUMAG00000003579	RBFOX1	99	85.063	Ursus_maritimus
ENSMICG00000034286	RBFOX1	69	100.000	ENSVPAG00000001284	RBFOX1	65	100.000	Vicugna_pacos
ENSMICG00000034286	RBFOX1	100	96.552	ENSVVUG00000017311	RBFOX1	100	96.552	Vulpes_vulpes