EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000034640 (Gene tree)
Gene ID: 105869295
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 41468 bases
Position: chr26:18058999-18100466
Accession: 105869295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000023514	YTH	PF04146.15	3.4e-40	1	1
ENSMICP00000017013	YTH	PF04146.15	3.5e-40	1	1
ENSMICP00000031105	YTH	PF04146.15	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000054287	YTHDC1-201	3401	XM_012760977	ENSMICP00000031105	737 (aa)	XP_012616431	UPI000642A73C
ENSMICT00000041636	YTHDC1-202	3347	XM_012760980	ENSMICP00000023514	719 (aa)	XP_012616434	UPI0006438246
ENSMICT00000041629	YTHDC1-203	3332	XM_012760979	ENSMICP00000017013	733 (aa)	XP_012616433	UPI000642EEBE

Gene Model

Click here to download ENSMICG00000034640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000034640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000034640	YTHDC1	100	98.100	ENSG00000083896	YTHDC1	100	98.100	Homo_sapiens
ENSMICG00000034640	YTHDC1	57	59.574	ENSAPOG00000013997	ythdc1	93	52.504	Acanthochromis_polyacanthus
ENSMICG00000034640	YTHDC1	100	96.617	ENSAMEG00000005688	YTHDC1	100	96.617	Ailuropoda_melanoleuca
ENSMICG00000034640	YTHDC1	71	59.091	ENSACIG00000019728	ythdc1	63	59.813	Amphilophus_citrinellus
ENSMICG00000034640	YTHDC1	56	61.927	ENSAOCG00000000239	ythdc1	94	55.758	Amphiprion_ocellaris
ENSMICG00000034640	YTHDC1	50	64.960	ENSAPEG00000000618	ythdc1	90	53.058	Amphiprion_percula
ENSMICG00000034640	YTHDC1	90	85.801	ENSAPLG00000009921	YTHDC1	92	87.160	Anas_platyrhynchos
ENSMICG00000034640	YTHDC1	93	83.529	ENSACAG00000009697	YTHDC1	93	83.971	Anolis_carolinensis
ENSMICG00000034640	YTHDC1	100	96.875	ENSANAG00000001522	YTHDC1	100	96.875	Aotus_nancymaae
ENSMICG00000034640	YTHDC1	93	52.514	ENSACLG00000019371	ythdc1	94	54.393	Astatotilapia_calliptera
ENSMICG00000034640	YTHDC1	93	64.235	ENSAMXG00000006978	ythdc1	92	65.710	Astyanax_mexicanus
ENSMICG00000034640	YTHDC1	100	96.065	ENSBTAG00000015572	YTHDC1	100	96.065	Bos_taurus
ENSMICG00000034640	YTHDC1	100	97.422	ENSCJAG00000009934	YTHDC1	100	97.422	Callithrix_jacchus
ENSMICG00000034640	YTHDC1	100	96.482	ENSCAFG00000002821	YTHDC1	100	96.482	Canis_familiaris
ENSMICG00000034640	YTHDC1	100	96.482	ENSCAFG00020027112	YTHDC1	100	96.482	Canis_lupus_dingo
ENSMICG00000034640	YTHDC1	90	89.818	ENSCHIG00000004810	YTHDC1	95	94.837	Capra_hircus
ENSMICG00000034640	YTHDC1	100	97.422	ENSTSYG00000011668	YTHDC1	100	97.422	Carlito_syrichta
ENSMICG00000034640	YTHDC1	89	69.640	ENSCAPG00000008722	YTHDC1	90	67.802	Cavia_aperea
ENSMICG00000034640	YTHDC1	100	89.552	ENSCPOG00000010929	YTHDC1	100	89.552	Cavia_porcellus
ENSMICG00000034640	YTHDC1	100	97.151	ENSCCAG00000035754	YTHDC1	100	97.151	Cebus_capucinus
ENSMICG00000034640	YTHDC1	100	98.236	ENSCATG00000036320	YTHDC1	100	98.236	Cercocebus_atys
ENSMICG00000034640	YTHDC1	99	97.111	ENSCLAG00000005482	YTHDC1	99	97.111	Chinchilla_lanigera
ENSMICG00000034640	YTHDC1	100	97.151	ENSCSAG00000005252	YTHDC1	100	97.151	Chlorocebus_sabaeus
ENSMICG00000034640	YTHDC1	92	86.411	ENSCPBG00000021965	YTHDC1	94	87.616	Chrysemys_picta_bellii
ENSMICG00000034640	YTHDC1	100	97.286	ENSCANG00000004769	YTHDC1	100	97.286	Colobus_angolensis_palliatus
ENSMICG00000034640	YTHDC1	100	96.879	ENSCGRG00001000816	Ythdc1	100	96.879	Cricetulus_griseus_chok1gshd
ENSMICG00000034640	YTHDC1	99	95.742	ENSCGRG00000009807	Ythdc1	99	95.742	Cricetulus_griseus_crigri
ENSMICG00000034640	YTHDC1	56	60.793	ENSCSEG00000020404	ythdc1	94	53.397	Cynoglossus_semilaevis
ENSMICG00000034640	YTHDC1	56	59.867	ENSCVAG00000022349	ythdc1	94	53.933	Cyprinodon_variegatus
ENSMICG00000034640	YTHDC1	93	63.242	ENSDARG00000051953	ythdc1	92	63.793	Danio_rerio
ENSMICG00000034640	YTHDC1	100	96.185	ENSDNOG00000004949	YTHDC1	100	96.185	Dasypus_novemcinctus
ENSMICG00000034640	YTHDC1	99	97.937	ENSDORG00000013045	Ythdc1	100	97.914	Dipodomys_ordii
ENSMICG00000034640	YTHDC1	79	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSMICG00000034640	YTHDC1	100	97.158	ENSEASG00005018383	YTHDC1	100	98.088	Equus_asinus_asinus
ENSMICG00000034640	YTHDC1	100	96.617	ENSECAG00000018303	YTHDC1	100	97.500	Equus_caballus
ENSMICG00000034640	YTHDC1	100	94.980	ENSEEUG00000015466	YTHDC1	100	94.980	Erinaceus_europaeus
ENSMICG00000034640	YTHDC1	93	61.463	ENSELUG00000014029	ythdc1	95	62.536	Esox_lucius
ENSMICG00000034640	YTHDC1	100	97.305	ENSFCAG00000026791	YTHDC1	100	97.305	Felis_catus
ENSMICG00000034640	YTHDC1	76	89.113	ENSFALG00000006581	YTHDC1	97	89.113	Ficedula_albicollis
ENSMICG00000034640	YTHDC1	99	96.266	ENSFDAG00000018560	YTHDC1	100	97.343	Fukomys_damarensis
ENSMICG00000034640	YTHDC1	63	67.925	ENSFHEG00000001286	ythdc1	60	56.627	Fundulus_heteroclitus
ENSMICG00000034640	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	78	64.539	Gadus_morhua
ENSMICG00000034640	YTHDC1	92	85.355	ENSGALG00000035906	YTHDC1	85	86.858	Gallus_gallus
ENSMICG00000034640	YTHDC1	50	66.788	ENSGAFG00000001759	ythdc1	56	67.133	Gambusia_affinis
ENSMICG00000034640	YTHDC1	57	62.791	ENSGACG00000015486	ythdc1	58	63.221	Gasterosteus_aculeatus
ENSMICG00000034640	YTHDC1	93	87.059	ENSGAGG00000007108	YTHDC1	93	86.765	Gopherus_agassizii
ENSMICG00000034640	YTHDC1	100	98.236	ENSGGOG00000021958	YTHDC1	100	98.236	Gorilla_gorilla
ENSMICG00000034640	YTHDC1	93	52.235	ENSHBUG00000019288	ythdc1	93	54.393	Haplochromis_burtoni
ENSMICG00000034640	YTHDC1	94	71.201	ENSHGLG00000003239	-	86	73.414	Heterocephalus_glaber_female
ENSMICG00000034640	YTHDC1	100	97.271	ENSHGLG00000006319	-	100	97.271	Heterocephalus_glaber_female
ENSMICG00000034640	YTHDC1	94	69.885	ENSHGLG00100008060	-	86	71.880	Heterocephalus_glaber_male
ENSMICG00000034640	YTHDC1	99	96.547	ENSHGLG00100001556	-	100	96.547	Heterocephalus_glaber_male
ENSMICG00000034640	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSMICG00000034640	YTHDC1	93	66.955	ENSIPUG00000018136	ythdc1	92	67.050	Ictalurus_punctatus
ENSMICG00000034640	YTHDC1	100	98.100	ENSSTOG00000013652	YTHDC1	100	98.100	Ictidomys_tridecemlineatus
ENSMICG00000034640	YTHDC1	91	92.090	ENSJJAG00000010268	Ythdc1	93	94.179	Jaculus_jaculus
ENSMICG00000034640	YTHDC1	56	60.959	ENSKMAG00000006483	ythdc1	87	65.333	Kryptolebias_marmoratus
ENSMICG00000034640	YTHDC1	65	63.462	ENSLBEG00000020831	ythdc1	74	75.000	Labrus_bergylta
ENSMICG00000034640	YTHDC1	87	73.561	ENSLACG00000004893	YTHDC1	92	75.196	Latimeria_chalumnae
ENSMICG00000034640	YTHDC1	93	73.900	ENSLOCG00000003045	ythdc1	87	73.684	Lepisosteus_oculatus
ENSMICG00000034640	YTHDC1	100	96.744	ENSLAFG00000021592	YTHDC1	100	96.744	Loxodonta_africana
ENSMICG00000034640	YTHDC1	100	98.372	ENSMFAG00000031927	YTHDC1	100	98.372	Macaca_fascicularis
ENSMICG00000034640	YTHDC1	100	97.286	ENSMMUG00000002265	YTHDC1	100	98.217	Macaca_mulatta
ENSMICG00000034640	YTHDC1	100	97.286	ENSMNEG00000033751	YTHDC1	100	97.286	Macaca_nemestrina
ENSMICG00000034640	YTHDC1	99	98.214	ENSMLEG00000042147	YTHDC1	99	98.214	Mandrillus_leucophaeus
ENSMICG00000034640	YTHDC1	55	62.350	ENSMAMG00000013122	ythdc1	92	56.101	Mastacembelus_armatus
ENSMICG00000034640	YTHDC1	93	52.095	ENSMZEG00005023173	ythdc1	93	54.393	Maylandia_zebra
ENSMICG00000034640	YTHDC1	93	84.412	ENSMGAG00000010391	YTHDC1	92	86.176	Meleagris_gallopavo
ENSMICG00000034640	YTHDC1	100	94.882	ENSMAUG00000001286	Ythdc1	100	94.882	Mesocricetus_auratus
ENSMICG00000034640	YTHDC1	100	97.135	ENSMOCG00000020201	Ythdc1	100	97.135	Microtus_ochrogaster
ENSMICG00000034640	YTHDC1	93	88.660	ENSMODG00000020754	-	92	89.396	Monodelphis_domestica
ENSMICG00000034640	YTHDC1	96	51.329	ENSMODG00000010076	-	96	51.982	Monodelphis_domestica
ENSMICG00000034640	YTHDC1	65	57.322	ENSMODG00000009173	-	88	62.077	Monodelphis_domestica
ENSMICG00000034640	YTHDC1	87	69.932	ENSMODG00000014337	-	95	70.316	Monodelphis_domestica
ENSMICG00000034640	YTHDC1	51	66.491	ENSMALG00000013412	ythdc1	94	53.870	Monopterus_albus
ENSMICG00000034640	YTHDC1	100	97.283	MGP_CAROLIEiJ_G0027347	Ythdc1	100	97.283	Mus_caroli
ENSMICG00000034640	YTHDC1	100	96.879	ENSMUSG00000035851	Ythdc1	100	96.879	Mus_musculus
ENSMICG00000034640	YTHDC1	100	97.151	MGP_PahariEiJ_G0017126	Ythdc1	100	97.151	Mus_pahari
ENSMICG00000034640	YTHDC1	100	97.151	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.151	Mus_spretus
ENSMICG00000034640	YTHDC1	93	73.149	ENSMPUG00000001743	YTHDC1	53	99.217	Mustela_putorius_furo
ENSMICG00000034640	YTHDC1	99	96.127	ENSMLUG00000016300	YTHDC1	100	97.203	Myotis_lucifugus
ENSMICG00000034640	YTHDC1	58	95.272	ENSNGAG00000024000	Ythdc1	93	95.272	Nannospalax_galili
ENSMICG00000034640	YTHDC1	60	63.222	ENSNBRG00000007663	ythdc1	73	65.688	Neolamprologus_brichardi
ENSMICG00000034640	YTHDC1	99	97.390	ENSNLEG00000009202	YTHDC1	99	97.390	Nomascus_leucogenys
ENSMICG00000034640	YTHDC1	81	82.609	ENSMEUG00000007128	YTHDC1	81	82.609	Notamacropus_eugenii
ENSMICG00000034640	YTHDC1	74	98.584	ENSOPRG00000008986	YTHDC1	74	98.584	Ochotona_princeps
ENSMICG00000034640	YTHDC1	100	95.522	ENSODEG00000001715	YTHDC1	100	95.522	Octodon_degus
ENSMICG00000034640	YTHDC1	93	52.933	ENSONIG00000012651	ythdc1	94	54.672	Oreochromis_niloticus
ENSMICG00000034640	YTHDC1	88	76.911	ENSOANG00000014398	YTHDC1	55	97.975	Ornithorhynchus_anatinus
ENSMICG00000034640	YTHDC1	93	81.871	ENSOCUG00000015886	YTHDC1	57	96.231	Oryctolagus_cuniculus
ENSMICG00000034640	YTHDC1	89	52.782	ENSORLG00000030544	ythdc1	94	54.597	Oryzias_latipes
ENSMICG00000034640	YTHDC1	92	51.170	ENSORLG00020019316	ythdc1	94	54.455	Oryzias_latipes_hni
ENSMICG00000034640	YTHDC1	55	62.010	ENSOMEG00000000551	ythdc1	94	54.545	Oryzias_melastigma
ENSMICG00000034640	YTHDC1	100	96.201	ENSOGAG00000003362	YTHDC1	100	96.201	Otolemur_garnettii
ENSMICG00000034640	YTHDC1	100	96.065	ENSOARG00000008633	YTHDC1	100	96.065	Ovis_aries
ENSMICG00000034640	YTHDC1	100	98.100	ENSPPAG00000041315	YTHDC1	100	98.100	Pan_paniscus
ENSMICG00000034640	YTHDC1	100	97.696	ENSPPRG00000011979	YTHDC1	100	97.696	Panthera_pardus
ENSMICG00000034640	YTHDC1	99	97.390	ENSPTIG00000015527	YTHDC1	100	97.390	Panthera_tigris_altaica
ENSMICG00000034640	YTHDC1	100	98.100	ENSPTRG00000016105	YTHDC1	100	98.100	Pan_troglodytes
ENSMICG00000034640	YTHDC1	100	98.236	ENSPANG00000021590	YTHDC1	100	98.236	Papio_anubis
ENSMICG00000034640	YTHDC1	93	69.364	ENSPKIG00000018497	ythdc1	93	68.876	Paramormyrops_kingsleyae
ENSMICG00000034640	YTHDC1	90	87.330	ENSPSIG00000002782	YTHDC1	92	87.029	Pelodiscus_sinensis
ENSMICG00000034640	YTHDC1	53	57.273	ENSPMGG00000000970	-	74	63.291	Periophthalmus_magnuspinnatus
ENSMICG00000034640	YTHDC1	99	96.978	ENSPEMG00000013850	Ythdc1	100	97.079	Peromyscus_maniculatus_bairdii
ENSMICG00000034640	YTHDC1	93	88.513	ENSPCIG00000006870	YTHDC1	92	89.249	Phascolarctos_cinereus
ENSMICG00000034640	YTHDC1	56	60.000	ENSPFOG00000013404	ythdc1	94	53.814	Poecilia_formosa
ENSMICG00000034640	YTHDC1	56	60.000	ENSPLAG00000011079	ythdc1	87	65.493	Poecilia_latipinna
ENSMICG00000034640	YTHDC1	56	60.000	ENSPMEG00000009238	ythdc1	94	54.302	Poecilia_mexicana
ENSMICG00000034640	YTHDC1	71	59.615	ENSPREG00000016973	ythdc1	93	50.363	Poecilia_reticulata
ENSMICG00000034640	YTHDC1	87	96.724	ENSPPYG00000014726	YTHDC1	100	97.946	Pongo_abelii
ENSMICG00000034640	YTHDC1	78	89.545	ENSPCAG00000009607	YTHDC1	77	89.706	Procavia_capensis
ENSMICG00000034640	YTHDC1	100	95.225	ENSPCOG00000019105	YTHDC1	100	95.225	Propithecus_coquereli
ENSMICG00000034640	YTHDC1	100	94.189	ENSPVAG00000015551	YTHDC1	100	94.189	Pteropus_vampyrus
ENSMICG00000034640	YTHDC1	93	52.514	ENSPNYG00000011687	ythdc1	94	54.393	Pundamilia_nyererei
ENSMICG00000034640	YTHDC1	93	69.353	ENSPNAG00000028365	ythdc1	93	69.440	Pygocentrus_nattereri
ENSMICG00000034640	YTHDC1	100	96.617	ENSRNOG00000001996	Ythdc1	100	96.617	Rattus_norvegicus
ENSMICG00000034640	YTHDC1	99	97.115	ENSRBIG00000028279	YTHDC1	99	97.115	Rhinopithecus_bieti
ENSMICG00000034640	YTHDC1	100	97.286	ENSRROG00000035028	YTHDC1	100	97.286	Rhinopithecus_roxellana
ENSMICG00000034640	YTHDC1	100	98.507	ENSSBOG00000022353	YTHDC1	100	98.507	Saimiri_boliviensis_boliviensis
ENSMICG00000034640	YTHDC1	93	87.482	ENSSHAG00000002538	YTHDC1	91	90.332	Sarcophilus_harrisii
ENSMICG00000034640	YTHDC1	93	68.338	ENSSFOG00015003298	ythdc1	93	67.914	Scleropages_formosus
ENSMICG00000034640	YTHDC1	56	60.762	ENSSMAG00000009086	ythdc1	94	54.342	Scophthalmus_maximus
ENSMICG00000034640	YTHDC1	92	53.582	ENSSDUG00000022008	ythdc1	94	56.742	Seriola_dumerili
ENSMICG00000034640	YTHDC1	55	61.501	ENSSLDG00000007926	ythdc1	94	56.546	Seriola_lalandi_dorsalis
ENSMICG00000034640	YTHDC1	78	97.578	ENSSARG00000010960	YTHDC1	100	97.578	Sorex_araneus
ENSMICG00000034640	YTHDC1	93	82.430	ENSSPUG00000009357	YTHDC1	94	84.266	Sphenodon_punctatus
ENSMICG00000034640	YTHDC1	56	62.844	ENSSPAG00000011449	ythdc1	94	54.746	Stegastes_partitus
ENSMICG00000034640	YTHDC1	100	97.301	ENSSSCG00000035505	YTHDC1	100	97.301	Sus_scrofa
ENSMICG00000034640	YTHDC1	93	85.735	ENSTGUG00000004452	-	92	85.735	Taeniopygia_guttata
ENSMICG00000034640	YTHDC1	62	64.444	ENSTRUG00000010142	ythdc1	72	70.000	Takifugu_rubripes
ENSMICG00000034640	YTHDC1	86	60.738	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSMICG00000034640	YTHDC1	93	87.776	ENSTBEG00000011546	YTHDC1	92	87.776	Tupaia_belangeri
ENSMICG00000034640	YTHDC1	100	95.670	ENSTTRG00000005083	YTHDC1	100	95.670	Tursiops_truncatus
ENSMICG00000034640	YTHDC1	93	96.507	ENSUAMG00000010388	YTHDC1	100	97.644	Ursus_americanus
ENSMICG00000034640	YTHDC1	99	83.564	ENSUMAG00000013668	YTHDC1	98	84.497	Ursus_maritimus
ENSMICG00000034640	YTHDC1	100	95.436	ENSVPAG00000009040	YTHDC1	100	95.436	Vicugna_pacos
ENSMICG00000034640	YTHDC1	99	97.671	ENSVVUG00000005387	YTHDC1	100	97.500	Vulpes_vulpes
ENSMICG00000034640	YTHDC1	92	73.599	ENSXETG00000017960	ythdc1	91	74.627	Xenopus_tropicalis
ENSMICG00000034640	YTHDC1	55	60.476	ENSXMAG00000005196	ythdc1	94	53.672	Xiphophorus_maculatus