EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMICG00000034708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 14889 bases
Position: chr12:7214763-7229651
Accession: 105881477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000032683	SMN	PF06003.12	5.9e-70	1	1
ENSMICP00000044041	SMN	PF06003.12	9.7e-69	1	1
ENSMICP00000047302	SMN	PF06003.12	1.7e-68	1	1
ENSMICP00000041606	SMN	PF06003.12	2.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000060802	-	570	-	ENSMICP00000041606	189 (aa)	-	UPI000C2EA0E5
ENSMICT00000060742	-	780	XM_012783189	ENSMICP00000044041	259 (aa)	XP_012638643	UPI000C2EA228
ENSMICT00000062156	-	771	-	ENSMICP00000047302	256 (aa)	-	UPI000C2ED20A
ENSMICT00000049025	-	672	-	ENSMICP00000032683	223 (aa)	-	UPI000C2EC9C9

Gene Model

Click here to download ENSMICG00000034708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000034708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000034708	-	99	89.011	ENSG00000205571	SMN2	99	89.011	Homo_sapiens
ENSMICG00000034708	-	99	89.011	ENSG00000172062	SMN1	99	89.011	Homo_sapiens
ENSMICG00000034708	-	81	55.000	ENSAPOG00000011324	smn1	83	44.578	Acanthochromis_polyacanthus
ENSMICG00000034708	-	94	88.750	ENSAMEG00000003316	-	97	74.830	Ailuropoda_melanoleuca
ENSMICG00000034708	-	71	57.595	ENSACIG00000019772	-	59	57.595	Amphilophus_citrinellus
ENSMICG00000034708	-	54	67.500	ENSACIG00000007598	smn1	80	59.060	Amphilophus_citrinellus
ENSMICG00000034708	-	81	55.000	ENSAOCG00000024444	smn1	82	49.153	Amphiprion_ocellaris
ENSMICG00000034708	-	81	55.556	ENSAPEG00000016504	smn1	83	46.559	Amphiprion_percula
ENSMICG00000034708	-	71	62.658	ENSATEG00000002182	smn1	71	47.034	Anabas_testudineus
ENSMICG00000034708	-	58	51.333	ENSAPLG00000010912	-	74	51.282	Anas_platyrhynchos
ENSMICG00000034708	-	91	60.000	ENSACAG00000010017	-	76	58.333	Anolis_carolinensis
ENSMICG00000034708	-	99	84.615	ENSANAG00000032133	-	99	72.789	Aotus_nancymaae
ENSMICG00000034708	-	71	62.658	ENSACLG00000007308	smn1	53	62.658	Astatotilapia_calliptera
ENSMICG00000034708	-	63	57.857	ENSAMXG00000013884	smn1	56	55.063	Astyanax_mexicanus
ENSMICG00000034708	-	93	82.895	ENSBTAG00000005743	SMN2	78	82.096	Bos_taurus
ENSMICG00000034708	-	99	87.912	ENSCJAG00000016290	-	99	87.912	Callithrix_jacchus
ENSMICG00000034708	-	94	88.750	ENSCAFG00000007812	SMN	97	74.648	Canis_familiaris
ENSMICG00000034708	-	93	88.750	ENSCAFG00020019229	-	90	74.823	Canis_lupus_dingo
ENSMICG00000034708	-	93	82.895	ENSCHIG00000015559	-	77	83.843	Capra_hircus
ENSMICG00000034708	-	99	86.667	ENSTSYG00000012058	-	95	93.506	Carlito_syrichta
ENSMICG00000034708	-	60	77.778	ENSCAPG00000011021	-	89	63.131	Cavia_aperea
ENSMICG00000034708	-	99	73.404	ENSCPOG00000012328	-	97	67.931	Cavia_porcellus
ENSMICG00000034708	-	100	75.824	ENSCPOG00000036973	-	100	67.905	Cavia_porcellus
ENSMICG00000034708	-	99	87.912	ENSCCAG00000018127	-	99	87.912	Cebus_capucinus
ENSMICG00000034708	-	99	87.912	ENSCATG00000037002	-	99	87.912	Cercocebus_atys
ENSMICG00000034708	-	93	73.750	ENSCLAG00000000284	-	100	66.667	Chinchilla_lanigera
ENSMICG00000034708	-	99	87.912	ENSCSAG00000015688	-	99	77.474	Chlorocebus_sabaeus
ENSMICG00000034708	-	75	84.524	ENSCHOG00000007346	-	73	85.246	Choloepus_hoffmanni
ENSMICG00000034708	-	89	61.957	ENSCPBG00000010968	-	79	60.731	Chrysemys_picta_bellii
ENSMICG00000034708	-	82	30.876	ENSCING00000014454	-	75	30.729	Ciona_intestinalis
ENSMICG00000034708	-	99	75.962	ENSCANG00000033324	-	99	72.692	Colobus_angolensis_palliatus
ENSMICG00000034708	-	99	87.912	ENSCANG00000038242	-	99	87.912	Colobus_angolensis_palliatus
ENSMICG00000034708	-	99	84.091	ENSCGRG00001017959	-	96	71.886	Cricetulus_griseus_chok1gshd
ENSMICG00000034708	-	99	52.055	ENSCGRG00001016998	-	95	51.601	Cricetulus_griseus_chok1gshd
ENSMICG00000034708	-	99	84.091	ENSCGRG00000007698	Smn1	96	71.886	Cricetulus_griseus_crigri
ENSMICG00000034708	-	93	44.151	ENSCSEG00000015227	smn1	84	47.012	Cynoglossus_semilaevis
ENSMICG00000034708	-	71	59.375	ENSCVAG00000007498	smn1	55	58.642	Cyprinodon_variegatus
ENSMICG00000034708	-	72	54.321	ENSDARG00000018494	smn1	56	58.228	Danio_rerio
ENSMICG00000034708	-	74	80.000	ENSDNOG00000007283	-	100	70.902	Dasypus_novemcinctus
ENSMICG00000034708	-	90	72.139	ENSDNOG00000045949	-	91	71.233	Dasypus_novemcinctus
ENSMICG00000034708	-	91	75.214	ENSDORG00000007082	Smn1	99	65.646	Dipodomys_ordii
ENSMICG00000034708	-	93	70.952	ENSETEG00000001406	-	96	70.854	Echinops_telfairi
ENSMICG00000034708	-	59	45.139	ENSEBUG00000011902	smn1	50	47.917	Eptatretus_burgeri
ENSMICG00000034708	-	91	73.729	ENSEASG00005018000	-	75	80.184	Equus_asinus_asinus
ENSMICG00000034708	-	93	89.610	ENSECAG00000015215	-	96	74.377	Equus_caballus
ENSMICG00000034708	-	75	82.143	ENSEEUG00000015777	-	85	76.498	Erinaceus_europaeus
ENSMICG00000034708	-	84	54.822	ENSELUG00000018067	smn1	59	55.952	Esox_lucius
ENSMICG00000034708	-	100	86.813	ENSFCAG00000028292	SMN	97	74.648	Felis_catus
ENSMICG00000034708	-	81	58.571	ENSFALG00000012320	-	75	58.182	Ficedula_albicollis
ENSMICG00000034708	-	100	78.125	ENSFDAG00000017683	-	100	69.333	Fukomys_damarensis
ENSMICG00000034708	-	80	56.180	ENSFHEG00000018508	smn1	90	46.988	Fundulus_heteroclitus
ENSMICG00000034708	-	75	50.595	ENSGMOG00000017279	smn1	63	48.571	Gadus_morhua
ENSMICG00000034708	-	87	60.914	ENSGALG00000002430	SMN	78	57.895	Gallus_gallus
ENSMICG00000034708	-	80	54.696	ENSGAFG00000009501	smn1	83	44.583	Gambusia_affinis
ENSMICG00000034708	-	83	54.167	ENSGACG00000010584	smn1	62	56.497	Gasterosteus_aculeatus
ENSMICG00000034708	-	81	39.474	ENSGAGG00000013639	-	56	51.562	Gopherus_agassizii
ENSMICG00000034708	-	91	56.962	ENSGAGG00000011374	-	78	60.000	Gopherus_agassizii
ENSMICG00000034708	-	87	89.691	ENSGGOG00000003872	-	85	88.995	Gorilla_gorilla
ENSMICG00000034708	-	99	89.686	ENSGGOG00000026704	-	99	89.686	Gorilla_gorilla
ENSMICG00000034708	-	81	57.778	ENSHBUG00000013987	smn1	55	62.658	Haplochromis_burtoni
ENSMICG00000034708	-	100	75.000	ENSHGLG00000001018	-	96	67.474	Heterocephalus_glaber_female
ENSMICG00000034708	-	100	74.725	ENSHGLG00000001905	-	100	66.441	Heterocephalus_glaber_female
ENSMICG00000034708	-	93	75.714	ENSHGLG00100018676	-	86	75.410	Heterocephalus_glaber_male
ENSMICG00000034708	-	100	75.000	ENSHGLG00100011252	-	96	67.474	Heterocephalus_glaber_male
ENSMICG00000034708	-	81	54.945	ENSHCOG00000017136	smn1	74	48.858	Hippocampus_comes
ENSMICG00000034708	-	82	53.297	ENSIPUG00000012580	smn1	50	56.962	Ictalurus_punctatus
ENSMICG00000034708	-	86	87.783	ENSSTOG00000012288	-	87	86.066	Ictidomys_tridecemlineatus
ENSMICG00000034708	-	78	62.069	ENSJJAG00000014853	-	100	65.969	Jaculus_jaculus
ENSMICG00000034708	-	73	59.259	ENSKMAG00000007239	smn1	83	46.748	Kryptolebias_marmoratus
ENSMICG00000034708	-	72	61.728	ENSLBEG00000022550	smn1	56	61.728	Labrus_bergylta
ENSMICG00000034708	-	70	38.272	ENSLACG00000009808	-	52	38.365	Latimeria_chalumnae
ENSMICG00000034708	-	82	52.717	ENSLOCG00000011339	smn1	82	52.137	Lepisosteus_oculatus
ENSMICG00000034708	-	100	85.556	ENSLAFG00000003425	-	97	69.799	Loxodonta_africana
ENSMICG00000034708	-	99	84.615	ENSMFAG00000008812	-	95	74.552	Macaca_fascicularis
ENSMICG00000034708	-	99	89.011	ENSMFAG00000031523	SMN1	99	89.011	Macaca_fascicularis
ENSMICG00000034708	-	99	82.418	ENSMMUG00000030594	-	95	73.835	Macaca_mulatta
ENSMICG00000034708	-	99	89.011	ENSMMUG00000020214	SMN1	99	89.011	Macaca_mulatta
ENSMICG00000034708	-	99	89.011	ENSMNEG00000035094	-	99	89.011	Macaca_nemestrina
ENSMICG00000034708	-	64	73.494	ENSMNEG00000036423	-	86	62.613	Macaca_nemestrina
ENSMICG00000034708	-	99	88.889	ENSMLEG00000041902	-	99	88.889	Mandrillus_leucophaeus
ENSMICG00000034708	-	81	56.667	ENSMAMG00000011034	smn1	58	58.580	Mastacembelus_armatus
ENSMICG00000034708	-	71	62.658	ENSMZEG00005013634	smn1	55	62.658	Maylandia_zebra
ENSMICG00000034708	-	56	55.200	ENSMGAG00000008889	-	71	51.923	Meleagris_gallopavo
ENSMICG00000034708	-	99	81.818	ENSMAUG00000010262	Smn1	96	70.819	Mesocricetus_auratus
ENSMICG00000034708	-	99	80.682	ENSMOCG00000017833	Smn1	96	69.039	Microtus_ochrogaster
ENSMICG00000034708	-	83	54.545	ENSMMOG00000005504	smn1	66	56.250	Mola_mola
ENSMICG00000034708	-	99	68.539	ENSMODG00000001436	-	77	68.534	Monodelphis_domestica
ENSMICG00000034708	-	81	54.444	ENSMALG00000008025	smn1	54	58.861	Monopterus_albus
ENSMICG00000034708	-	99	85.227	MGP_CAROLIEiJ_G0018836	Smn1	92	78.947	Mus_caroli
ENSMICG00000034708	-	99	84.091	ENSMUSG00000021645	Smn1	92	78.947	Mus_musculus
ENSMICG00000034708	-	99	84.091	MGP_PahariEiJ_G0015911	Smn1	76	89.474	Mus_pahari
ENSMICG00000034708	-	99	84.091	MGP_SPRETEiJ_G0019718	Smn1	92	78.947	Mus_spretus
ENSMICG00000034708	-	91	86.864	ENSMPUG00000014470	-	82	87.179	Mustela_putorius_furo
ENSMICG00000034708	-	100	85.556	ENSMLUG00000010603	-	96	74.582	Myotis_lucifugus
ENSMICG00000034708	-	100	83.516	ENSNGAG00000019833	Smn1	82	82.305	Nannospalax_galili
ENSMICG00000034708	-	71	63.291	ENSNBRG00000023000	smn1	55	63.291	Neolamprologus_brichardi
ENSMICG00000034708	-	99	89.011	ENSNLEG00000004454	-	99	89.011	Nomascus_leucogenys
ENSMICG00000034708	-	72	58.289	ENSMEUG00000011393	-	83	60.825	Notamacropus_eugenii
ENSMICG00000034708	-	76	87.500	ENSOPRG00000002015	-	86	81.193	Ochotona_princeps
ENSMICG00000034708	-	91	80.085	ENSODEG00000015976	-	85	78.715	Octodon_degus
ENSMICG00000034708	-	72	62.500	ENSONIG00000011799	smn1	55	62.500	Oreochromis_niloticus
ENSMICG00000034708	-	69	80.769	ENSOANG00000001626	-	80	62.069	Ornithorhynchus_anatinus
ENSMICG00000034708	-	90	75.630	ENSOCUG00000025183	-	94	67.500	Oryctolagus_cuniculus
ENSMICG00000034708	-	89	90.769	ENSOCUG00000026649	-	99	69.024	Oryctolagus_cuniculus
ENSMICG00000034708	-	100	83.516	ENSOCUG00000017097	-	99	70.408	Oryctolagus_cuniculus
ENSMICG00000034708	-	77	56.322	ENSORLG00000010552	smn1	54	60.127	Oryzias_latipes
ENSMICG00000034708	-	77	56.897	ENSORLG00020007936	smn1	66	56.897	Oryzias_latipes_hni
ENSMICG00000034708	-	71	60.127	ENSORLG00015022425	smn1	54	60.127	Oryzias_latipes_hsok
ENSMICG00000034708	-	68	61.589	ENSOMEG00000007824	smn1	54	61.146	Oryzias_melastigma
ENSMICG00000034708	-	91	75.610	ENSOGAG00000031414	-	82	77.447	Otolemur_garnettii
ENSMICG00000034708	-	86	80.311	ENSOARG00000005425	-	81	79.646	Ovis_aries
ENSMICG00000034708	-	99	89.011	ENSPPAG00000036640	-	99	89.011	Pan_paniscus
ENSMICG00000034708	-	100	86.813	ENSPPRG00000005575	-	97	75.000	Panthera_pardus
ENSMICG00000034708	-	100	86.813	ENSPTIG00000007745	-	97	75.352	Panthera_tigris_altaica
ENSMICG00000034708	-	99	89.011	ENSPTRG00000016955	-	99	89.011	Pan_troglodytes
ENSMICG00000034708	-	99	89.011	ENSPANG00000013601	-	99	89.011	Papio_anubis
ENSMICG00000034708	-	99	85.714	ENSPANG00000000253	-	82	84.711	Papio_anubis
ENSMICG00000034708	-	83	48.454	ENSPKIG00000011096	smn1	79	44.796	Paramormyrops_kingsleyae
ENSMICG00000034708	-	80	63.492	ENSPSIG00000014787	-	72	57.759	Pelodiscus_sinensis
ENSMICG00000034708	-	83	42.544	ENSPMGG00000012285	smn1	79	42.194	Periophthalmus_magnuspinnatus
ENSMICG00000034708	-	94	39.640	ENSPMAG00000005004	smn1	52	45.625	Petromyzon_marinus
ENSMICG00000034708	-	55	52.800	ENSPMAG00000000277	-	100	52.800	Petromyzon_marinus
ENSMICG00000034708	-	85	83.607	ENSPCIG00000025764	-	78	68.240	Phascolarctos_cinereus
ENSMICG00000034708	-	71	60.625	ENSPFOG00000007786	smn1	83	45.833	Poecilia_formosa
ENSMICG00000034708	-	71	61.250	ENSPLAG00000012071	smn1	83	46.250	Poecilia_latipinna
ENSMICG00000034708	-	71	60.625	ENSPMEG00000017085	smn1	83	45.833	Poecilia_mexicana
ENSMICG00000034708	-	80	56.354	ENSPREG00000005824	smn1	83	46.250	Poecilia_reticulata
ENSMICG00000034708	-	87	87.879	ENSPPYG00000015533	-	97	76.119	Pongo_abelii
ENSMICG00000034708	-	66	76.351	ENSPPYG00000019189	-	75	76.351	Pongo_abelii
ENSMICG00000034708	-	86	85.938	ENSPCAG00000004187	-	100	66.667	Procavia_capensis
ENSMICG00000034708	-	84	96.610	ENSPCOG00000022307	-	100	92.070	Propithecus_coquereli
ENSMICG00000034708	-	100	87.912	ENSPVAG00000005977	-	100	76.949	Pteropus_vampyrus
ENSMICG00000034708	-	71	63.291	ENSPNYG00000014148	smn1	55	63.291	Pundamilia_nyererei
ENSMICG00000034708	-	89	77.586	ENSRNOG00000018067	Smn1	96	68.440	Rattus_norvegicus
ENSMICG00000034708	-	87	84.021	ENSRBIG00000036775	-	79	82.028	Rhinopithecus_bieti
ENSMICG00000034708	-	99	87.912	ENSRBIG00000037052	-	93	92.208	Rhinopithecus_bieti
ENSMICG00000034708	-	99	87.912	ENSRROG00000039399	-	93	92.208	Rhinopithecus_roxellana
ENSMICG00000034708	-	99	83.516	ENSRROG00000031088	-	99	71.795	Rhinopithecus_roxellana
ENSMICG00000034708	-	99	86.813	ENSSBOG00000011665	-	99	86.813	Saimiri_boliviensis_boliviensis
ENSMICG00000034708	-	75	86.310	ENSSBOG00000020112	-	78	81.614	Saimiri_boliviensis_boliviensis
ENSMICG00000034708	-	90	76.471	ENSSHAG00000001499	-	81	64.912	Sarcophilus_harrisii
ENSMICG00000034708	-	87	47.556	ENSSFOG00015015507	smn1	79	44.643	Scleropages_formosus
ENSMICG00000034708	-	58	62.791	ENSSMAG00000007922	smn1	55	58.025	Scophthalmus_maximus
ENSMICG00000034708	-	82	53.846	ENSSDUG00000018533	smn1	58	55.556	Seriola_dumerili
ENSMICG00000034708	-	81	55.000	ENSSLDG00000021135	smn1	54	60.127	Seriola_lalandi_dorsalis
ENSMICG00000034708	-	86	63.402	ENSSPUG00000000373	-	77	62.555	Sphenodon_punctatus
ENSMICG00000034708	-	84	53.403	ENSSPAG00000004345	smn1	82	48.729	Stegastes_partitus
ENSMICG00000034708	-	70	51.282	ENSSSCG00000033865	-	95	54.359	Sus_scrofa
ENSMICG00000034708	-	98	85.714	ENSSSCG00000016970	-	100	75.932	Sus_scrofa
ENSMICG00000034708	-	96	62.977	ENSSSCG00000029127	-	94	62.977	Sus_scrofa
ENSMICG00000034708	-	89	60.891	ENSTGUG00000001548	-	83	55.794	Taeniopygia_guttata
ENSMICG00000034708	-	75	55.952	ENSTRUG00000000736	smn	63	55.932	Takifugu_rubripes
ENSMICG00000034708	-	72	55.828	ENSTNIG00000009892	smn1	57	55.828	Tetraodon_nigroviridis
ENSMICG00000034708	-	81	89.503	ENSTBEG00000002399	-	95	89.796	Tupaia_belangeri
ENSMICG00000034708	-	81	87.432	ENSTTRG00000005080	-	78	82.833	Tursiops_truncatus
ENSMICG00000034708	-	82	89.130	ENSUAMG00000024947	-	77	88.038	Ursus_americanus
ENSMICG00000034708	-	94	90.000	ENSUMAG00000007842	-	75	75.510	Ursus_maritimus
ENSMICG00000034708	-	70	87.821	ENSVPAG00000009887	-	83	70.259	Vicugna_pacos
ENSMICG00000034708	-	94	88.750	ENSVVUG00000006934	-	97	74.648	Vulpes_vulpes
ENSMICG00000034708	-	57	63.793	ENSXETG00000004912	-	77	63.793	Xenopus_tropicalis
ENSMICG00000034708	-	79	58.152	ENSXETG00000018189	smn2	77	52.119	Xenopus_tropicalis
ENSMICG00000034708	-	72	60.000	ENSXMAG00000001521	smn1	60	60.000	Xiphophorus_maculatus