EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000034953 (Gene tree)
Gene ID: 105880113
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 85849 bases
Position: chr31:33537979-33623827
Accession: 105880113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000040814	Exo_endo_phos	PF03372.23	7e-15	1	1
ENSMICP00000036357	Exo_endo_phos	PF03372.23	7.3e-15	1	1
ENSMICP00000041358	Exo_endo_phos	PF03372.23	7.5e-15	1	1
ENSMICP00000031958	Exo_endo_phos	PF03372.23	7.7e-15	1	1
ENSMICP00000028046	Exo_endo_phos	PF03372.23	9.9e-15	1	1
ENSMICP00000044997	Exo_endo_phos	PF03372.23	1e-14	1	1
ENSMICP00000040814	DUF1866	PF08952.11	4.2e-59	1	1
ENSMICP00000036357	DUF1866	PF08952.11	4.3e-59	1	1
ENSMICP00000041358	DUF1866	PF08952.11	4.5e-59	1	1
ENSMICP00000031958	DUF1866	PF08952.11	4.6e-59	1	1
ENSMICP00000028046	DUF1866	PF08952.11	4.7e-59	1	1
ENSMICP00000044997	DUF1866	PF08952.11	4.9e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000068389	SYNJ1-205	3990	-	ENSMICP00000041358	1329 (aa)	-	UPI000C2EA67F
ENSMICT00000030081	SYNJ1-203	7091	XM_012780889	ENSMICP00000031958	1349 (aa)	XP_012636343	UPI000642A59E
ENSMICT00000068322	SYNJ1-201	8142	XM_012780906	ENSMICP00000040814	1264 (aa)	XP_012636360	UPI000C2EA3D1
ENSMICT00000041700	SYNJ1-202	8114	XM_012780895	ENSMICP00000028046	1528 (aa)	XP_012636349	UPI000642AAB0
ENSMICT00000053940	SYNJ1-206	3885	-	ENSMICP00000036357	1294 (aa)	-	UPI00085B0C1B
ENSMICT00000065571	SYNJ1-204	4711	XM_012780892	ENSMICP00000044997	1562 (aa)	XP_012636346	UPI000C2EBAA1

Gene Model

Click here to download ENSMICG00000034953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000034953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000034953	SYNJ1	83	53.723	ENSMICG00000015804	SYNJ2	80	54.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000034953	SYNJ1	100	97.389	ENSG00000159082	SYNJ1	100	100.000	Homo_sapiens
ENSMICG00000034953	SYNJ1	92	75.687	ENSAPOG00000002809	synj1	98	69.740	Acanthochromis_polyacanthus
ENSMICG00000034953	SYNJ1	99	95.387	ENSAMEG00000015028	SYNJ1	98	92.698	Ailuropoda_melanoleuca
ENSMICG00000034953	SYNJ1	99	68.130	ENSACIG00000008857	synj1	97	67.260	Amphilophus_citrinellus
ENSMICG00000034953	SYNJ1	99	70.801	ENSAOCG00000009835	synj1	97	70.520	Amphiprion_ocellaris
ENSMICG00000034953	SYNJ1	99	69.660	ENSAPEG00000021010	synj1	89	65.333	Amphiprion_percula
ENSMICG00000034953	SYNJ1	99	69.635	ENSATEG00000002306	synj1	89	65.121	Anabas_testudineus
ENSMICG00000034953	SYNJ1	100	84.027	ENSAPLG00000011832	SYNJ1	100	79.007	Anas_platyrhynchos
ENSMICG00000034953	SYNJ1	100	82.864	ENSACAG00000003006	-	100	83.790	Anolis_carolinensis
ENSMICG00000034953	SYNJ1	100	97.143	ENSANAG00000027325	SYNJ1	100	97.143	Aotus_nancymaae
ENSMICG00000034953	SYNJ1	99	69.260	ENSACLG00000002255	synj1	97	69.611	Astatotilapia_calliptera
ENSMICG00000034953	SYNJ1	99	70.722	ENSAMXG00000008208	synj1	95	62.899	Astyanax_mexicanus
ENSMICG00000034953	SYNJ1	99	93.909	ENSBTAG00000003063	SYNJ1	100	93.783	Bos_taurus
ENSMICG00000034953	SYNJ1	100	97.143	ENSCJAG00000009187	SYNJ1	100	97.143	Callithrix_jacchus
ENSMICG00000034953	SYNJ1	99	94.762	ENSCAFG00000009041	SYNJ1	99	94.766	Canis_familiaris
ENSMICG00000034953	SYNJ1	99	95.628	ENSCAFG00020025776	SYNJ1	100	92.605	Canis_lupus_dingo
ENSMICG00000034953	SYNJ1	99	94.515	ENSCHIG00000005095	SYNJ1	100	90.778	Capra_hircus
ENSMICG00000034953	SYNJ1	100	96.139	ENSTSYG00000014541	SYNJ1	100	96.139	Carlito_syrichta
ENSMICG00000034953	SYNJ1	95	78.189	ENSCAPG00000014483	SYNJ1	99	80.932	Cavia_aperea
ENSMICG00000034953	SYNJ1	100	92.906	ENSCPOG00000012182	SYNJ1	100	94.050	Cavia_porcellus
ENSMICG00000034953	SYNJ1	100	96.834	ENSCCAG00000020825	SYNJ1	100	96.834	Cebus_capucinus
ENSMICG00000034953	SYNJ1	100	97.231	ENSCATG00000033891	SYNJ1	100	97.231	Cercocebus_atys
ENSMICG00000034953	SYNJ1	100	93.669	ENSCLAG00000009796	SYNJ1	100	98.268	Chinchilla_lanigera
ENSMICG00000034953	SYNJ1	100	96.034	ENSCSAG00000009654	SYNJ1	100	97.178	Chlorocebus_sabaeus
ENSMICG00000034953	SYNJ1	84	92.834	ENSCHOG00000012390	SYNJ1	87	92.834	Choloepus_hoffmanni
ENSMICG00000034953	SYNJ1	95	85.859	ENSCPBG00000006402	SYNJ1	97	87.328	Chrysemys_picta_bellii
ENSMICG00000034953	SYNJ1	100	97.375	ENSCANG00000031359	SYNJ1	100	97.375	Colobus_angolensis_palliatus
ENSMICG00000034953	SYNJ1	99	93.243	ENSCGRG00001010861	Synj1	100	93.440	Cricetulus_griseus_chok1gshd
ENSMICG00000034953	SYNJ1	100	92.220	ENSCGRG00000015749	Synj1	100	96.681	Cricetulus_griseus_crigri
ENSMICG00000034953	SYNJ1	86	75.453	ENSCSEG00000019614	synj1	98	68.615	Cynoglossus_semilaevis
ENSMICG00000034953	SYNJ1	86	73.381	ENSCVAG00000019250	synj1	96	68.343	Cyprinodon_variegatus
ENSMICG00000034953	SYNJ1	86	77.132	ENSDARG00000025011	synj1	100	71.096	Danio_rerio
ENSMICG00000034953	SYNJ1	98	89.915	ENSDNOG00000010732	SYNJ1	99	86.915	Dasypus_novemcinctus
ENSMICG00000034953	SYNJ1	55	97.980	ENSDORG00000014735	-	100	97.980	Dipodomys_ordii
ENSMICG00000034953	SYNJ1	86	94.872	ENSETEG00000018674	SYNJ1	79	95.652	Echinops_telfairi
ENSMICG00000034953	SYNJ1	99	95.087	ENSEASG00005006287	SYNJ1	98	96.122	Equus_asinus_asinus
ENSMICG00000034953	SYNJ1	99	95.276	ENSECAG00000004829	SYNJ1	100	95.253	Equus_caballus
ENSMICG00000034953	SYNJ1	92	89.306	ENSEEUG00000005150	SYNJ1	95	89.306	Erinaceus_europaeus
ENSMICG00000034953	SYNJ1	100	66.770	ENSELUG00000009731	synj1	82	72.232	Esox_lucius
ENSMICG00000034953	SYNJ1	99	95.596	ENSFCAG00000012498	SYNJ1	100	95.069	Felis_catus
ENSMICG00000034953	SYNJ1	74	77.166	ENSFALG00000004680	SYNJ1	100	70.777	Ficedula_albicollis
ENSMICG00000034953	SYNJ1	100	93.516	ENSFDAG00000016818	SYNJ1	100	98.268	Fukomys_damarensis
ENSMICG00000034953	SYNJ1	99	68.801	ENSFHEG00000017689	synj1	97	61.849	Fundulus_heteroclitus
ENSMICG00000034953	SYNJ1	79	72.691	ENSGMOG00000014852	synj1	77	72.620	Gadus_morhua
ENSMICG00000034953	SYNJ1	99	86.736	ENSGALG00000034317	SYNJ1	100	80.129	Gallus_gallus
ENSMICG00000034953	SYNJ1	99	69.400	ENSGAFG00000019466	synj1	89	66.118	Gambusia_affinis
ENSMICG00000034953	SYNJ1	99	63.102	ENSGACG00000020575	synj1	94	65.187	Gasterosteus_aculeatus
ENSMICG00000034953	SYNJ1	99	86.414	ENSGAGG00000022523	SYNJ1	100	85.285	Gopherus_agassizii
ENSMICG00000034953	SYNJ1	100	97.231	ENSGGOG00000015945	SYNJ1	100	97.231	Gorilla_gorilla
ENSMICG00000034953	SYNJ1	100	67.825	ENSHBUG00000007774	synj1	97	69.611	Haplochromis_burtoni
ENSMICG00000034953	SYNJ1	100	93.288	ENSHGLG00000006420	SYNJ1	100	98.268	Heterocephalus_glaber_female
ENSMICG00000034953	SYNJ1	99	93.257	ENSHGLG00100012591	SYNJ1	100	98.268	Heterocephalus_glaber_male
ENSMICG00000034953	SYNJ1	99	66.167	ENSHCOG00000012774	synj1	96	66.667	Hippocampus_comes
ENSMICG00000034953	SYNJ1	99	71.329	ENSIPUG00000010691	SYNJ1	95	64.546	Ictalurus_punctatus
ENSMICG00000034953	SYNJ1	100	94.661	ENSSTOG00000015806	SYNJ1	100	95.805	Ictidomys_tridecemlineatus
ENSMICG00000034953	SYNJ1	98	87.910	ENSJJAG00000020168	Synj1	100	84.965	Jaculus_jaculus
ENSMICG00000034953	SYNJ1	86	76.117	ENSKMAG00000004221	synj1	94	73.273	Kryptolebias_marmoratus
ENSMICG00000034953	SYNJ1	99	69.938	ENSLBEG00000015081	synj1	96	64.355	Labrus_bergylta
ENSMICG00000034953	SYNJ1	99	76.462	ENSLACG00000005928	SYNJ1	98	69.838	Latimeria_chalumnae
ENSMICG00000034953	SYNJ1	100	76.284	ENSLOCG00000009230	synj1	100	69.029	Lepisosteus_oculatus
ENSMICG00000034953	SYNJ1	99	93.482	ENSLAFG00000011806	SYNJ1	99	88.952	Loxodonta_africana
ENSMICG00000034953	SYNJ1	98	96.443	ENSMFAG00000018883	SYNJ1	99	96.443	Macaca_fascicularis
ENSMICG00000034953	SYNJ1	100	95.890	ENSMMUG00000004624	SYNJ1	100	97.032	Macaca_mulatta
ENSMICG00000034953	SYNJ1	99	97.297	ENSMNEG00000040077	SYNJ1	100	94.961	Macaca_nemestrina
ENSMICG00000034953	SYNJ1	100	97.452	ENSMLEG00000037029	SYNJ1	100	97.452	Mandrillus_leucophaeus
ENSMICG00000034953	SYNJ1	99	69.681	ENSMAMG00000013404	synj1	89	65.550	Mastacembelus_armatus
ENSMICG00000034953	SYNJ1	100	68.327	ENSMZEG00005024358	synj1	97	70.008	Maylandia_zebra
ENSMICG00000034953	SYNJ1	99	83.851	ENSMGAG00000014522	SYNJ1	100	78.719	Meleagris_gallopavo
ENSMICG00000034953	SYNJ1	100	92.067	ENSMAUG00000009743	Synj1	100	96.392	Mesocricetus_auratus
ENSMICG00000034953	SYNJ1	89	73.054	ENSMMOG00000010203	synj1	98	67.811	Mola_mola
ENSMICG00000034953	SYNJ1	99	80.430	ENSMODG00000021073	SYNJ1	100	80.956	Monodelphis_domestica
ENSMICG00000034953	SYNJ1	99	69.300	ENSMALG00000014015	synj1	92	63.097	Monopterus_albus
ENSMICG00000034953	SYNJ1	100	92.302	MGP_CAROLIEiJ_G0020951	Synj1	100	97.258	Mus_caroli
ENSMICG00000034953	SYNJ1	100	92.530	ENSMUSG00000022973	Synj1	100	97.547	Mus_musculus
ENSMICG00000034953	SYNJ1	100	92.759	MGP_PahariEiJ_G0016656	Synj1	100	97.547	Mus_pahari
ENSMICG00000034953	SYNJ1	100	92.607	MGP_SPRETEiJ_G0021857	Synj1	100	97.547	Mus_spretus
ENSMICG00000034953	SYNJ1	99	94.055	ENSMPUG00000001153	SYNJ1	100	91.656	Mustela_putorius_furo
ENSMICG00000034953	SYNJ1	53	94.776	ENSMLUG00000026584	-	100	94.815	Myotis_lucifugus
ENSMICG00000034953	SYNJ1	61	82.497	ENSMLUG00000005764	-	100	75.416	Myotis_lucifugus
ENSMICG00000034953	SYNJ1	100	93.440	ENSNGAG00000000453	Synj1	100	97.691	Nannospalax_galili
ENSMICG00000034953	SYNJ1	86	72.744	ENSNBRG00000011936	synj1	97	61.302	Neolamprologus_brichardi
ENSMICG00000034953	SYNJ1	90	94.633	ENSNLEG00000003734	SYNJ1	100	94.633	Nomascus_leucogenys
ENSMICG00000034953	SYNJ1	88	76.530	ENSMEUG00000004158	-	73	77.633	Notamacropus_eugenii
ENSMICG00000034953	SYNJ1	93	93.902	ENSOPRG00000013602	SYNJ1	93	93.902	Ochotona_princeps
ENSMICG00000034953	SYNJ1	55	98.268	ENSODEG00000002409	-	100	98.268	Octodon_degus
ENSMICG00000034953	SYNJ1	99	70.345	ENSONIG00000004667	synj1	99	67.218	Oreochromis_niloticus
ENSMICG00000034953	SYNJ1	97	83.969	ENSOANG00000006929	SYNJ1	97	78.269	Ornithorhynchus_anatinus
ENSMICG00000034953	SYNJ1	99	92.486	ENSOCUG00000001420	SYNJ1	100	88.946	Oryctolagus_cuniculus
ENSMICG00000034953	SYNJ1	86	75.136	ENSORLG00000004320	synj1	88	74.142	Oryzias_latipes
ENSMICG00000034953	SYNJ1	86	73.503	ENSORLG00020011994	synj1	82	74.047	Oryzias_latipes_hni
ENSMICG00000034953	SYNJ1	86	75.777	ENSORLG00015018077	synj1	93	62.010	Oryzias_latipes_hsok
ENSMICG00000034953	SYNJ1	86	76.143	ENSOMEG00000014322	synj1	96	68.245	Oryzias_melastigma
ENSMICG00000034953	SYNJ1	100	91.346	ENSOGAG00000006010	SYNJ1	98	91.346	Otolemur_garnettii
ENSMICG00000034953	SYNJ1	99	92.302	ENSOARG00000013414	SYNJ1	97	89.261	Ovis_aries
ENSMICG00000034953	SYNJ1	100	97.375	ENSPPAG00000026784	SYNJ1	100	97.375	Pan_paniscus
ENSMICG00000034953	SYNJ1	99	95.677	ENSPPRG00000023469	SYNJ1	100	95.146	Panthera_pardus
ENSMICG00000034953	SYNJ1	99	95.596	ENSPTIG00000007930	SYNJ1	100	95.069	Panthera_tigris_altaica
ENSMICG00000034953	SYNJ1	100	97.468	ENSPTRG00000023787	SYNJ1	100	97.468	Pan_troglodytes
ENSMICG00000034953	SYNJ1	100	97.468	ENSPTRG00000048135	-	100	97.468	Pan_troglodytes
ENSMICG00000034953	SYNJ1	100	97.375	ENSPANG00000022531	SYNJ1	100	97.375	Papio_anubis
ENSMICG00000034953	SYNJ1	89	77.864	ENSPKIG00000022603	synj1	95	77.124	Paramormyrops_kingsleyae
ENSMICG00000034953	SYNJ1	86	76.325	ENSPMGG00000016831	synj1	90	67.047	Periophthalmus_magnuspinnatus
ENSMICG00000034953	SYNJ1	100	92.982	ENSPEMG00000018767	Synj1	100	97.114	Peromyscus_maniculatus_bairdii
ENSMICG00000034953	SYNJ1	79	60.924	ENSPMAG00000002887	synj1	96	53.159	Petromyzon_marinus
ENSMICG00000034953	SYNJ1	99	87.658	ENSPCIG00000016372	SYNJ1	100	87.121	Phascolarctos_cinereus
ENSMICG00000034953	SYNJ1	100	68.671	ENSPFOG00000016886	synj1	96	71.008	Poecilia_formosa
ENSMICG00000034953	SYNJ1	100	67.643	ENSPLAG00000017559	synj1	96	69.161	Poecilia_latipinna
ENSMICG00000034953	SYNJ1	99	69.615	ENSPMEG00000007643	synj1	89	64.963	Poecilia_mexicana
ENSMICG00000034953	SYNJ1	99	70.481	ENSPREG00000012412	synj1	96	70.198	Poecilia_reticulata
ENSMICG00000034953	SYNJ1	99	96.370	ENSPPYG00000011365	SYNJ1	97	96.370	Pongo_abelii
ENSMICG00000034953	SYNJ1	89	94.286	ENSPCAG00000009906	SYNJ1	89	94.286	Procavia_capensis
ENSMICG00000034953	SYNJ1	95	93.555	ENSPCOG00000024841	SYNJ1	100	93.555	Propithecus_coquereli
ENSMICG00000034953	SYNJ1	99	88.966	ENSPVAG00000000892	SYNJ1	100	86.730	Pteropus_vampyrus
ENSMICG00000034953	SYNJ1	99	69.421	ENSPNYG00000022989	synj1	100	67.416	Pundamilia_nyererei
ENSMICG00000034953	SYNJ1	86	77.532	ENSPNAG00000021119	synj1	90	77.727	Pygocentrus_nattereri
ENSMICG00000034953	SYNJ1	100	93.591	ENSRNOG00000002051	Synj1	100	93.591	Rattus_norvegicus
ENSMICG00000034953	SYNJ1	100	97.220	ENSRBIG00000034477	SYNJ1	100	97.220	Rhinopithecus_bieti
ENSMICG00000034953	SYNJ1	100	97.375	ENSRROG00000039256	SYNJ1	100	97.375	Rhinopithecus_roxellana
ENSMICG00000034953	SYNJ1	100	97.143	ENSSBOG00000021001	SYNJ1	100	97.143	Saimiri_boliviensis_boliviensis
ENSMICG00000034953	SYNJ1	99	86.077	ENSSHAG00000008538	SYNJ1	99	78.421	Sarcophilus_harrisii
ENSMICG00000034953	SYNJ1	99	72.210	ENSSFOG00015006095	synj1	95	65.359	Scleropages_formosus
ENSMICG00000034953	SYNJ1	99	68.494	ENSSMAG00000018066	synj1	95	68.580	Scophthalmus_maximus
ENSMICG00000034953	SYNJ1	86	76.524	ENSSDUG00000013058	synj1	88	65.959	Seriola_dumerili
ENSMICG00000034953	SYNJ1	100	67.208	ENSSLDG00000021406	synj1	96	70.652	Seriola_lalandi_dorsalis
ENSMICG00000034953	SYNJ1	69	97.180	ENSSARG00000009490	SYNJ1	74	97.180	Sorex_araneus
ENSMICG00000034953	SYNJ1	99	86.429	ENSSPUG00000012552	SYNJ1	100	79.104	Sphenodon_punctatus
ENSMICG00000034953	SYNJ1	93	69.175	ENSSPAG00000006812	SYNJ1	95	64.337	Stegastes_partitus
ENSMICG00000034953	SYNJ1	99	69.893	ENSSPAG00000017029	synj1	95	66.815	Stegastes_partitus
ENSMICG00000034953	SYNJ1	100	94.014	ENSSSCG00000012035	SYNJ1	100	94.167	Sus_scrofa
ENSMICG00000034953	SYNJ1	100	83.497	ENSTGUG00000013445	SYNJ1	100	77.421	Taeniopygia_guttata
ENSMICG00000034953	SYNJ1	96	72.286	ENSTRUG00000006907	synj1	93	68.082	Takifugu_rubripes
ENSMICG00000034953	SYNJ1	99	68.385	ENSTNIG00000009940	synj1	100	66.716	Tetraodon_nigroviridis
ENSMICG00000034953	SYNJ1	92	87.747	ENSTBEG00000016298	SYNJ1	92	87.747	Tupaia_belangeri
ENSMICG00000034953	SYNJ1	99	84.574	ENSTTRG00000002222	SYNJ1	100	81.651	Tursiops_truncatus
ENSMICG00000034953	SYNJ1	99	95.790	ENSUAMG00000018606	SYNJ1	99	98.117	Ursus_americanus
ENSMICG00000034953	SYNJ1	99	95.870	ENSUMAG00000018419	SYNJ1	99	98.117	Ursus_maritimus
ENSMICG00000034953	SYNJ1	87	100.000	ENSVPAG00000001241	SYNJ1	87	100.000	Vicugna_pacos
ENSMICG00000034953	SYNJ1	100	94.661	ENSVVUG00000023125	SYNJ1	100	95.805	Vulpes_vulpes
ENSMICG00000034953	SYNJ1	100	76.814	ENSXETG00000009899	synj1	100	68.411	Xenopus_tropicalis
ENSMICG00000034953	SYNJ1	86	75.862	ENSXCOG00000011896	synj1	99	68.413	Xiphophorus_couchianus
ENSMICG00000034953	SYNJ1	100	67.411	ENSXMAG00000017524	synj1	100	69.681	Xiphophorus_maculatus