EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000035435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: leucine--tRNA ligase%2C cytoplasmic pseudogene
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 3519 bases
Position: chr8:20412565-20416083
Accession: 105882633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000038597	tRNA-synt_1g	PF09334.11	7.5e-16	1	2
ENSMICP00000038597	tRNA-synt_1g	PF09334.11	7.5e-16	2	2
ENSMICP00000049943	tRNA-synt_1g	PF09334.11	5.9e-12	1	1
ENSMICP00000045466	tRNA-synt_1g	PF09334.11	3.8e-06	1	1
ENSMICP00000049943	Anticodon_1	PF08264.13	1.4e-16	1	1
ENSMICP00000038597	Anticodon_1	PF08264.13	1.5e-16	1	1
ENSMICP00000038597	tRNA-synt_1	PF00133.22	4.3e-18	1	1
ENSMICP00000045466	tRNA-synt_1	PF00133.22	8.4e-13	1	1
ENSMICP00000049943	tRNA-synt_1e	PF01406.19	0.00013	1	1
ENSMICP00000038597	tRNA-synt_1e	PF01406.19	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000049893	-	3087	-	ENSMICP00000038597	1028 (aa)	-	UPI000C2ECF01
ENSMICT00000067189	-	2934	-	ENSMICP00000049943	977 (aa)	-	UPI000C2EAFB8
ENSMICT00000065709	-	495	-	ENSMICP00000045466	164 (aa)	-	UPI000C2ECFBC

Gene Model

Click here to download ENSMICG00000035435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000035435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000035435	-	100	92.667	ENSMICG00000035589	-	100	84.099

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000035435	-	100	88.406	ENSG00000133706	LARS	100	84.375	Homo_sapiens
ENSMICG00000035435	-	100	65.177	ENSAPOG00000010585	larsb	100	67.232	Acanthochromis_polyacanthus
ENSMICG00000035435	-	99	86.765	ENSAMEG00000017584	LARS	100	79.932	Ailuropoda_melanoleuca
ENSMICG00000035435	-	100	64.522	ENSACIG00000014026	larsb	100	64.522	Amphilophus_citrinellus
ENSMICG00000035435	-	100	65.287	ENSAOCG00000016931	larsb	100	65.287	Amphiprion_ocellaris
ENSMICG00000035435	-	100	65.372	ENSAPEG00000017720	larsb	100	65.372	Amphiprion_percula
ENSMICG00000035435	-	100	66.435	ENSATEG00000010441	larsb	99	66.435	Anabas_testudineus
ENSMICG00000035435	-	96	71.103	ENSAPLG00000008145	LARS	100	72.359	Anas_platyrhynchos
ENSMICG00000035435	-	100	70.025	ENSACAG00000013916	LARS	100	71.259	Anolis_carolinensis
ENSMICG00000035435	-	100	71.453	ENSANAG00000014375	LARS	100	71.453	Aotus_nancymaae
ENSMICG00000035435	-	100	65.118	ENSACLG00000010881	larsb	100	65.118	Astatotilapia_calliptera
ENSMICG00000035435	-	100	66.723	ENSAMXG00000019979	larsb	100	66.723	Astyanax_mexicanus
ENSMICG00000035435	-	100	78.401	ENSBTAG00000006765	LARS	100	78.401	Bos_taurus
ENSMICG00000035435	-	99	46.740	WBGene00003073	lars-1	99	46.740	Caenorhabditis_elegans
ENSMICG00000035435	-	100	86.957	ENSCJAG00000021314	LARS	100	79.252	Callithrix_jacchus
ENSMICG00000035435	-	100	85.507	ENSCAFG00000006431	LARS	100	79.847	Canis_familiaris
ENSMICG00000035435	-	99	85.294	ENSCAFG00020025009	LARS	99	79.813	Canis_lupus_dingo
ENSMICG00000035435	-	100	87.681	ENSCHIG00000014949	LARS	100	78.912	Capra_hircus
ENSMICG00000035435	-	100	85.294	ENSTSYG00000001253	LARS	100	79.082	Carlito_syrichta
ENSMICG00000035435	-	96	63.061	ENSCAPG00000015676	LARS	97	63.095	Cavia_aperea
ENSMICG00000035435	-	100	84.058	ENSCPOG00000012329	LARS	100	77.551	Cavia_porcellus
ENSMICG00000035435	-	100	86.232	ENSCCAG00000020789	LARS	100	79.422	Cebus_capucinus
ENSMICG00000035435	-	97	79.159	ENSCATG00000033463	LARS	100	79.234	Cercocebus_atys
ENSMICG00000035435	-	100	86.232	ENSCLAG00000011193	LARS	100	77.806	Chinchilla_lanigera
ENSMICG00000035435	-	100	89.130	ENSCSAG00000012280	LARS	97	80.000	Chlorocebus_sabaeus
ENSMICG00000035435	-	88	93.151	ENSCHOG00000009309	LARS	85	95.833	Choloepus_hoffmanni
ENSMICG00000035435	-	99	72.170	ENSCPBG00000008415	LARS	99	74.164	Chrysemys_picta_bellii
ENSMICG00000035435	-	96	55.766	ENSCING00000008535	-	94	56.166	Ciona_intestinalis
ENSMICG00000035435	-	99	52.498	ENSCSAVG00000009040	-	99	56.652	Ciona_savignyi
ENSMICG00000035435	-	100	89.130	ENSCANG00000031137	LARS	100	80.102	Colobus_angolensis_palliatus
ENSMICG00000035435	-	91	73.555	ENSCGRG00001004647	Lars	98	73.555	Cricetulus_griseus_chok1gshd
ENSMICG00000035435	-	100	80.000	ENSCGRG00000007284	Lars	100	73.939	Cricetulus_griseus_crigri
ENSMICG00000035435	-	100	64.755	ENSCSEG00000014984	larsb	100	64.755	Cynoglossus_semilaevis
ENSMICG00000035435	-	100	65.680	ENSCVAG00000014685	larsb	100	65.680	Cyprinodon_variegatus
ENSMICG00000035435	-	71	66.244	ENSDARG00000019280	larsb	99	66.244	Danio_rerio
ENSMICG00000035435	-	85	68.874	ENSDARG00000090988	larsa	99	67.416	Danio_rerio
ENSMICG00000035435	-	96	77.173	ENSDNOG00000017963	LARS	100	77.349	Dasypus_novemcinctus
ENSMICG00000035435	-	100	73.430	ENSDORG00000014913	Lars	100	73.430	Dipodomys_ordii
ENSMICG00000035435	-	99	48.264	FBgn0284253	LeuRS	99	48.223	Drosophila_melanogaster
ENSMICG00000035435	-	94	95.890	ENSETEG00000003145	LARS	95	97.917	Echinops_telfairi
ENSMICG00000035435	-	93	51.607	ENSEBUG00000014985	larsb	97	50.826	Eptatretus_burgeri
ENSMICG00000035435	-	100	87.681	ENSEASG00005020569	LARS	100	79.847	Equus_asinus_asinus
ENSMICG00000035435	-	100	88.194	ENSECAG00000008963	LARS	99	81.137	Equus_caballus
ENSMICG00000035435	-	85	85.294	ENSEEUG00000014854	LARS	83	85.294	Erinaceus_europaeus
ENSMICG00000035435	-	100	64.316	ENSELUG00000023311	larsb	100	64.316	Esox_lucius
ENSMICG00000035435	-	100	87.681	ENSFCAG00000008715	LARS	100	80.490	Felis_catus
ENSMICG00000035435	-	100	71.623	ENSFALG00000003209	LARS	93	71.623	Ficedula_albicollis
ENSMICG00000035435	-	100	82.963	ENSFDAG00000020764	LARS	100	77.636	Fukomys_damarensis
ENSMICG00000035435	-	90	63.506	ENSFHEG00000010437	larsb	100	63.506	Fundulus_heteroclitus
ENSMICG00000035435	-	99	62.840	ENSGMOG00000013645	larsb	99	63.095	Gadus_morhua
ENSMICG00000035435	-	100	72.557	ENSGALG00000007494	LARS	100	72.557	Gallus_gallus
ENSMICG00000035435	-	100	64.780	ENSGAFG00000005029	larsb	100	64.780	Gambusia_affinis
ENSMICG00000035435	-	99	64.255	ENSGACG00000020720	larsb	99	64.170	Gasterosteus_aculeatus
ENSMICG00000035435	-	99	71.489	ENSGAGG00000002353	LARS	99	71.489	Gopherus_agassizii
ENSMICG00000035435	-	100	88.406	ENSGGOG00000004103	LARS	100	80.187	Gorilla_gorilla
ENSMICG00000035435	-	99	65.199	ENSHBUG00000003051	larsb	100	67.151	Haplochromis_burtoni
ENSMICG00000035435	-	100	84.058	ENSHGLG00000006937	LARS	100	78.231	Heterocephalus_glaber_female
ENSMICG00000035435	-	100	84.058	ENSHGLG00100002801	LARS	100	78.231	Heterocephalus_glaber_male
ENSMICG00000035435	-	99	64.413	ENSHCOG00000003651	larsb	100	64.413	Hippocampus_comes
ENSMICG00000035435	-	99	65.646	ENSIPUG00000010756	lars	100	65.860	Ictalurus_punctatus
ENSMICG00000035435	-	100	86.765	ENSSTOG00000002356	LARS	100	79.082	Ictidomys_tridecemlineatus
ENSMICG00000035435	-	100	84.058	ENSJJAG00000015265	Lars	100	77.721	Jaculus_jaculus
ENSMICG00000035435	-	100	65.232	ENSKMAG00000009903	larsb	100	65.232	Kryptolebias_marmoratus
ENSMICG00000035435	-	100	65.823	ENSLBEG00000025237	larsb	100	65.823	Labrus_bergylta
ENSMICG00000035435	-	100	66.639	ENSLACG00000009321	LARS	100	67.742	Latimeria_chalumnae
ENSMICG00000035435	-	99	64.721	ENSLOCG00000010442	larsb	100	65.476	Lepisosteus_oculatus
ENSMICG00000035435	-	99	85.507	ENSLAFG00000000318	LARS	100	78.383	Loxodonta_africana
ENSMICG00000035435	-	100	87.681	ENSMFAG00000038685	LARS	100	79.932	Macaca_fascicularis
ENSMICG00000035435	-	100	87.681	ENSMMUG00000029787	LARS	100	79.932	Macaca_mulatta
ENSMICG00000035435	-	99	88.235	ENSMNEG00000044014	LARS	99	77.768	Macaca_nemestrina
ENSMICG00000035435	-	99	88.235	ENSMLEG00000037563	LARS	99	80.153	Mandrillus_leucophaeus
ENSMICG00000035435	-	100	65.287	ENSMAMG00000021385	larsb	100	65.287	Mastacembelus_armatus
ENSMICG00000035435	-	100	65.034	ENSMZEG00005002662	larsb	100	65.034	Maylandia_zebra
ENSMICG00000035435	-	96	72.447	ENSMGAG00000009388	LARS	100	72.447	Meleagris_gallopavo
ENSMICG00000035435	-	99	81.690	ENSMAUG00000003063	Lars	100	68.576	Mesocricetus_auratus
ENSMICG00000035435	-	100	82.143	ENSMOCG00000002092	Lars	100	75.976	Microtus_ochrogaster
ENSMICG00000035435	-	100	62.852	ENSMMOG00000013802	larsb	100	62.852	Mola_mola
ENSMICG00000035435	-	99	70.111	ENSMODG00000010231	LARS	99	70.111	Monodelphis_domestica
ENSMICG00000035435	-	99	64.044	ENSMALG00000018444	larsb	99	64.044	Monopterus_albus
ENSMICG00000035435	-	100	81.429	MGP_CAROLIEiJ_G0022225	Lars	100	75.976	Mus_caroli
ENSMICG00000035435	-	100	79.286	ENSMUSG00000024493	Lars	100	75.722	Mus_musculus
ENSMICG00000035435	-	100	82.143	MGP_PahariEiJ_G0018958	Lars	100	76.061	Mus_pahari
ENSMICG00000035435	-	100	81.429	MGP_SPRETEiJ_G0023135	Lars	100	76.146	Mus_spretus
ENSMICG00000035435	-	100	87.681	ENSMPUG00000007844	LARS	100	79.847	Mustela_putorius_furo
ENSMICG00000035435	-	99	86.765	ENSMLUG00000001125	LARS	100	77.872	Myotis_lucifugus
ENSMICG00000035435	-	100	81.159	ENSNGAG00000011596	Lars	100	77.126	Nannospalax_galili
ENSMICG00000035435	-	100	65.203	ENSNBRG00000005764	larsb	100	65.203	Neolamprologus_brichardi
ENSMICG00000035435	-	99	86.029	ENSNLEG00000009816	LARS	99	80.000	Nomascus_leucogenys
ENSMICG00000035435	-	75	76.866	ENSMEUG00000002332	-	51	79.070	Notamacropus_eugenii
ENSMICG00000035435	-	78	79.167	ENSOPRG00000003076	LARS	83	79.167	Ochotona_princeps
ENSMICG00000035435	-	99	76.182	ENSODEG00000004882	LARS	100	76.182	Octodon_degus
ENSMICG00000035435	-	100	65.456	ENSONIG00000008493	larsb	100	65.456	Oreochromis_niloticus
ENSMICG00000035435	-	100	75.352	ENSOANG00000005755	LARS	100	69.653	Ornithorhynchus_anatinus
ENSMICG00000035435	-	100	86.957	ENSOCUG00000015684	LARS	100	79.847	Oryctolagus_cuniculus
ENSMICG00000035435	-	100	64.443	ENSORLG00000001622	larsb	100	64.443	Oryzias_latipes
ENSMICG00000035435	-	100	64.611	ENSORLG00020019950	larsb	100	64.611	Oryzias_latipes_hni
ENSMICG00000035435	-	100	64.611	ENSORLG00015003895	larsb	100	64.611	Oryzias_latipes_hsok
ENSMICG00000035435	-	100	65.034	ENSOMEG00000005677	larsb	100	65.034	Oryzias_melastigma
ENSMICG00000035435	-	95	94.118	ENSOGAG00000008750	LARS	93	94.118	Otolemur_garnettii
ENSMICG00000035435	-	99	87.500	ENSOARG00000002454	-	100	78.638	Ovis_aries
ENSMICG00000035435	-	100	87.681	ENSOARG00000015911	-	99	78.656	Ovis_aries
ENSMICG00000035435	-	100	88.406	ENSPPAG00000027964	LARS	99	80.068	Pan_paniscus
ENSMICG00000035435	-	100	88.406	ENSPPRG00000023492	LARS	100	84.375	Panthera_pardus
ENSMICG00000035435	-	100	88.406	ENSPTIG00000013110	LARS	100	84.375	Panthera_tigris_altaica
ENSMICG00000035435	-	100	88.406	ENSPTRG00000017372	LARS	100	80.017	Pan_troglodytes
ENSMICG00000035435	-	100	88.406	ENSPANG00000002663	LARS	100	79.932	Papio_anubis
ENSMICG00000035435	-	99	63.976	ENSPKIG00000006650	larsb	99	63.976	Paramormyrops_kingsleyae
ENSMICG00000035435	-	99	72.588	ENSPSIG00000015641	LARS	100	72.588	Pelodiscus_sinensis
ENSMICG00000035435	-	71	65.906	ENSPMGG00000019556	LARS	99	65.906	Periophthalmus_magnuspinnatus
ENSMICG00000035435	-	77	63.768	ENSPMGG00000019552	-	89	63.636	Periophthalmus_magnuspinnatus
ENSMICG00000035435	-	87	91.262	ENSPEMG00000010933	Lars	100	71.902	Peromyscus_maniculatus_bairdii
ENSMICG00000035435	-	56	57.336	ENSPMAG00000005301	larsb	98	57.336	Petromyzon_marinus
ENSMICG00000035435	-	100	78.261	ENSPCIG00000030572	LARS	100	74.490	Phascolarctos_cinereus
ENSMICG00000035435	-	100	65.372	ENSPFOG00000002361	larsb	100	65.372	Poecilia_formosa
ENSMICG00000035435	-	100	65.541	ENSPLAG00000016550	larsb	100	65.541	Poecilia_latipinna
ENSMICG00000035435	-	100	65.287	ENSPMEG00000018422	larsb	100	65.287	Poecilia_mexicana
ENSMICG00000035435	-	100	64.865	ENSPREG00000005668	larsb	100	64.865	Poecilia_reticulata
ENSMICG00000035435	-	100	87.681	ENSPPYG00000015908	LARS	97	78.535	Pongo_abelii
ENSMICG00000035435	-	95	67.777	ENSPCAG00000005621	LARS	100	67.777	Procavia_capensis
ENSMICG00000035435	-	100	90.667	ENSPCOG00000019325	LARS	100	86.250	Propithecus_coquereli
ENSMICG00000035435	-	96	69.035	ENSPVAG00000011237	LARS	100	70.246	Pteropus_vampyrus
ENSMICG00000035435	-	100	64.865	ENSPNYG00000015254	larsb	100	64.865	Pundamilia_nyererei
ENSMICG00000035435	-	100	66.015	ENSPNAG00000027191	larsb	100	66.015	Pygocentrus_nattereri
ENSMICG00000035435	-	100	81.429	ENSRNOG00000018304	Lars	100	75.976	Rattus_norvegicus
ENSMICG00000035435	-	95	79.204	ENSRBIG00000043198	LARS	99	79.204	Rhinopithecus_bieti
ENSMICG00000035435	-	75	88.060	ENSRROG00000041701	-	85	88.060	Rhinopithecus_roxellana
ENSMICG00000035435	-	86	36.346	YPL160W	CDC60	93	37.416	Saccharomyces_cerevisiae
ENSMICG00000035435	-	99	76.320	ENSSBOG00000026661	LARS	100	78.462	Saimiri_boliviensis_boliviensis
ENSMICG00000035435	-	100	78.261	ENSSHAG00000006084	LARS	100	75.446	Sarcophilus_harrisii
ENSMICG00000035435	-	96	67.536	ENSSFOG00015018117	larsb	88	67.536	Scleropages_formosus
ENSMICG00000035435	-	88	67.114	ENSSMAG00000004078	larsb	97	67.114	Scophthalmus_maximus
ENSMICG00000035435	-	100	65.456	ENSSDUG00000021142	larsb	100	65.456	Seriola_dumerili
ENSMICG00000035435	-	100	65.625	ENSSLDG00000007054	larsb	100	65.625	Seriola_lalandi_dorsalis
ENSMICG00000035435	-	89	84.892	ENSSARG00000013481	LARS	84	84.328	Sorex_araneus
ENSMICG00000035435	-	100	70.439	ENSSPUG00000013805	LARS	100	71.732	Sphenodon_punctatus
ENSMICG00000035435	-	100	65.456	ENSSPAG00000012124	larsb	100	65.456	Stegastes_partitus
ENSMICG00000035435	-	100	75.425	ENSSSCG00000014411	LARS	100	75.425	Sus_scrofa
ENSMICG00000035435	-	99	72.170	ENSTGUG00000000092	-	99	72.170	Taeniopygia_guttata
ENSMICG00000035435	-	100	65.203	ENSTRUG00000005358	larsb	100	65.203	Takifugu_rubripes
ENSMICG00000035435	-	99	62.288	ENSTNIG00000018214	larsb	100	62.288	Tetraodon_nigroviridis
ENSMICG00000035435	-	90	77.551	ENSTBEG00000003757	LARS	94	77.551	Tupaia_belangeri
ENSMICG00000035435	-	96	75.220	ENSTTRG00000016712	LARS	96	75.220	Tursiops_truncatus
ENSMICG00000035435	-	100	86.957	ENSUAMG00000019907	LARS	99	81.408	Ursus_americanus
ENSMICG00000035435	-	100	86.232	ENSUMAG00000010585	LARS	100	80.017	Ursus_maritimus
ENSMICG00000035435	-	95	81.973	ENSVPAG00000000557	LARS	91	81.973	Vicugna_pacos
ENSMICG00000035435	-	100	84.783	ENSVVUG00000021124	LARS	100	79.677	Vulpes_vulpes
ENSMICG00000035435	-	99	69.584	ENSXETG00000002320	lars	99	69.584	Xenopus_tropicalis
ENSMICG00000035435	-	100	65.034	ENSXMAG00000001454	larsb	100	65.034	Xiphophorus_maculatus