EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000036111 (Gene tree)
Gene ID: 105885824
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Minus strand
Length: 142140 bases
Position: chr14:69637404-69779543
Accession: 105885824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000024880	La	PF05383.17	5.1e-22	1	1
ENSMICP00000038684	La	PF05383.17	1.1e-21	1	1
ENSMICP00000033643	La	PF05383.17	1.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000051215	LARP1B-202	2509	XM_012791081	ENSMICP00000038684	519 (aa)	XP_012646535	UPI000642C97A
ENSMICT00000033123	LARP1B-203	2814	XM_012791084	ENSMICP00000024880	335 (aa)	XP_012646538	UPI00064376FD
ENSMICT00000053580	LARP1B-201	2712	XM_012791074	ENSMICP00000033643	904 (aa)	XP_012646528	UPI000C2ED7C2

Gene Model

Click here to download ENSMICG00000036111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000036111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000036111	LARP1B	98	74.510	ENSMICG00000028052	-	99	74.901
ENSMICG00000036111	LARP1B	98	82.779	ENSMICG00000037883	-	90	82.477
ENSMICG00000036111	LARP1B	99	60.475	ENSMICG00000000837	LARP1	98	62.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000036111	LARP1B	100	93.433	ENSG00000138709	LARP1B	96	100.000	Homo_sapiens
ENSMICG00000036111	LARP1B	97	58.689	ENSAPOG00000020101	larp1b	85	57.614	Acanthochromis_polyacanthus
ENSMICG00000036111	LARP1B	100	95.224	ENSAMEG00000002748	LARP1B	100	95.224	Ailuropoda_melanoleuca
ENSMICG00000036111	LARP1B	96	56.984	ENSACIG00000023890	larp1b	82	56.469	Amphilophus_citrinellus
ENSMICG00000036111	LARP1B	97	51.262	ENSAOCG00000014268	larp1b	84	57.973	Amphiprion_ocellaris
ENSMICG00000036111	LARP1B	97	59.231	ENSAPEG00000004126	larp1b	85	58.199	Amphiprion_percula
ENSMICG00000036111	LARP1B	99	57.481	ENSATEG00000017849	larp1b	85	57.188	Anabas_testudineus
ENSMICG00000036111	LARP1B	96	70.871	ENSAPLG00000010129	LARP1B	98	70.950	Anas_platyrhynchos
ENSMICG00000036111	LARP1B	98	77.087	ENSACAG00000011338	LARP1B	86	80.024	Anolis_carolinensis
ENSMICG00000036111	LARP1B	98	84.902	ENSANAG00000034618	LARP1B	96	81.571	Aotus_nancymaae
ENSMICG00000036111	LARP1B	96	57.930	ENSACLG00000011948	larp1b	82	58.061	Astatotilapia_calliptera
ENSMICG00000036111	LARP1B	85	58.168	ENSAMXG00000006805	larp1b	83	54.362	Astyanax_mexicanus
ENSMICG00000036111	LARP1B	100	92.928	ENSBTAG00000012135	LARP1B	99	90.577	Bos_taurus
ENSMICG00000036111	LARP1B	100	94.627	ENSCJAG00000003338	LARP1B	100	94.627	Callithrix_jacchus
ENSMICG00000036111	LARP1B	100	95.022	ENSCAFG00000003831	LARP1B	100	93.457	Canis_familiaris
ENSMICG00000036111	LARP1B	100	95.522	ENSCAFG00020018899	LARP1B	100	95.522	Canis_lupus_dingo
ENSMICG00000036111	LARP1B	100	92.560	ENSCHIG00000023144	LARP1B	100	92.560	Capra_hircus
ENSMICG00000036111	LARP1B	98	87.842	ENSTSYG00000002037	-	93	87.842	Carlito_syrichta
ENSMICG00000036111	LARP1B	76	95.536	ENSCPOG00000034668	-	93	95.536	Cavia_porcellus
ENSMICG00000036111	LARP1B	99	94.611	ENSCCAG00000021948	LARP1B	99	94.611	Cebus_capucinus
ENSMICG00000036111	LARP1B	99	92.341	ENSCATG00000013541	LARP1B	100	92.341	Cercocebus_atys
ENSMICG00000036111	LARP1B	100	88.657	ENSCLAG00000006448	-	100	88.657	Chinchilla_lanigera
ENSMICG00000036111	LARP1B	99	93.239	ENSCSAG00000003582	LARP1B	100	93.239	Chlorocebus_sabaeus
ENSMICG00000036111	LARP1B	100	83.406	ENSCHOG00000005354	LARP1B	100	83.297	Choloepus_hoffmanni
ENSMICG00000036111	LARP1B	99	79.736	ENSCPBG00000017480	LARP1B	86	80.066	Chrysemys_picta_bellii
ENSMICG00000036111	LARP1B	99	87.935	ENSCANG00000026958	LARP1B	100	87.935	Colobus_angolensis_palliatus
ENSMICG00000036111	LARP1B	100	93.134	ENSCGRG00001004660	-	100	93.134	Cricetulus_griseus_chok1gshd
ENSMICG00000036111	LARP1B	100	92.836	ENSCGRG00000001914	-	100	92.836	Cricetulus_griseus_crigri
ENSMICG00000036111	LARP1B	96	54.723	ENSCSEG00000013519	larp1b	85	55.335	Cynoglossus_semilaevis
ENSMICG00000036111	LARP1B	97	57.405	ENSCVAG00000005046	larp1b	85	55.843	Cyprinodon_variegatus
ENSMICG00000036111	LARP1B	98	55.604	ENSDARG00000061169	larp1b	79	56.612	Danio_rerio
ENSMICG00000036111	LARP1B	98	93.009	ENSDNOG00000018765	-	100	91.781	Dasypus_novemcinctus
ENSMICG00000036111	LARP1B	88	89.076	ENSETEG00000012497	LARP1B	89	89.076	Echinops_telfairi
ENSMICG00000036111	LARP1B	94	52.079	ENSEBUG00000003668	larp1b	87	52.683	Eptatretus_burgeri
ENSMICG00000036111	LARP1B	99	95.210	ENSEASG00005018106	LARP1B	99	95.210	Equus_asinus_asinus
ENSMICG00000036111	LARP1B	98	95.137	ENSECAG00000001088	LARP1B	81	92.699	Equus_caballus
ENSMICG00000036111	LARP1B	69	54.947	ENSELUG00000023774	larp1b	79	48.759	Esox_lucius
ENSMICG00000036111	LARP1B	100	94.925	ENSFCAG00000014650	-	100	94.925	Felis_catus
ENSMICG00000036111	LARP1B	99	69.891	ENSFALG00000008098	LARP1B	99	69.891	Ficedula_albicollis
ENSMICG00000036111	LARP1B	99	57.447	ENSFHEG00000010264	larp1b	81	57.660	Fundulus_heteroclitus
ENSMICG00000036111	LARP1B	91	55.824	ENSGMOG00000005207	larp1b	67	56.170	Gadus_morhua
ENSMICG00000036111	LARP1B	98	71.269	ENSGALG00000010207	LARP1B	87	71.604	Gallus_gallus
ENSMICG00000036111	LARP1B	91	60.681	ENSGAFG00000012012	larp1b	97	59.410	Gambusia_affinis
ENSMICG00000036111	LARP1B	97	53.813	ENSGACG00000004609	larp1b	83	56.536	Gasterosteus_aculeatus
ENSMICG00000036111	LARP1B	100	79.648	ENSGAGG00000017209	LARP1B	85	79.978	Gopherus_agassizii
ENSMICG00000036111	LARP1B	100	93.433	ENSGGOG00000015900	LARP1B	100	93.433	Gorilla_gorilla
ENSMICG00000036111	LARP1B	96	58.057	ENSHBUG00000009730	larp1b	82	58.188	Haplochromis_burtoni
ENSMICG00000036111	LARP1B	100	87.021	ENSHGLG00000006728	-	99	87.316	Heterocephalus_glaber_female
ENSMICG00000036111	LARP1B	98	75.684	ENSHGLG00000013922	-	97	74.848	Heterocephalus_glaber_female
ENSMICG00000036111	LARP1B	98	75.684	ENSHGLG00100016491	-	97	74.848	Heterocephalus_glaber_male
ENSMICG00000036111	LARP1B	100	87.761	ENSHGLG00100014041	-	96	87.761	Heterocephalus_glaber_male
ENSMICG00000036111	LARP1B	75	62.174	ENSHCOG00000000918	larp1b	96	62.899	Hippocampus_comes
ENSMICG00000036111	LARP1B	87	60.832	ENSIPUG00000012138	larp1b	81	56.317	Ictalurus_punctatus
ENSMICG00000036111	LARP1B	100	91.369	ENSSTOG00000008596	-	100	91.369	Ictidomys_tridecemlineatus
ENSMICG00000036111	LARP1B	91	68.627	ENSSTOG00000033183	-	97	67.785	Ictidomys_tridecemlineatus
ENSMICG00000036111	LARP1B	96	75.389	ENSSTOG00000034510	-	87	75.389	Ictidomys_tridecemlineatus
ENSMICG00000036111	LARP1B	99	81.269	ENSSTOG00000021917	-	94	82.477	Ictidomys_tridecemlineatus
ENSMICG00000036111	LARP1B	99	89.521	ENSJJAG00000022360	Larp1b	99	89.521	Jaculus_jaculus
ENSMICG00000036111	LARP1B	96	56.257	ENSKMAG00000011589	larp1b	85	56.754	Kryptolebias_marmoratus
ENSMICG00000036111	LARP1B	97	58.233	ENSLBEG00000005655	larp1b	85	57.614	Labrus_bergylta
ENSMICG00000036111	LARP1B	99	74.638	ENSLACG00000015247	LARP1B	99	71.100	Latimeria_chalumnae
ENSMICG00000036111	LARP1B	98	67.387	ENSLOCG00000010684	larp1b	92	68.958	Lepisosteus_oculatus
ENSMICG00000036111	LARP1B	99	95.238	ENSLAFG00000008473	-	99	95.238	Loxodonta_africana
ENSMICG00000036111	LARP1B	69	88.966	ENSMFAG00000003306	-	93	88.966	Macaca_fascicularis
ENSMICG00000036111	LARP1B	100	94.627	ENSMFAG00000002218	LARP1B	100	94.627	Macaca_fascicularis
ENSMICG00000036111	LARP1B	100	94.627	ENSMMUG00000021347	LARP1B	100	94.627	Macaca_mulatta
ENSMICG00000036111	LARP1B	65	90.210	ENSMNEG00000027747	-	89	90.210	Macaca_nemestrina
ENSMICG00000036111	LARP1B	91	93.333	ENSMNEG00000030406	LARP1B	100	93.333	Macaca_nemestrina
ENSMICG00000036111	LARP1B	99	89.497	ENSMLEG00000009306	LARP1B	100	89.738	Mandrillus_leucophaeus
ENSMICG00000036111	LARP1B	99	58.086	ENSMAMG00000000081	larp1b	85	58.396	Mastacembelus_armatus
ENSMICG00000036111	LARP1B	76	64.380	ENSMZEG00005002545	larp1b	94	62.983	Maylandia_zebra
ENSMICG00000036111	LARP1B	94	65.432	ENSMGAG00000004809	LARP1B	98	65.657	Meleagris_gallopavo
ENSMICG00000036111	LARP1B	100	92.239	ENSMAUG00000007879	-	100	92.239	Mesocricetus_auratus
ENSMICG00000036111	LARP1B	79	95.057	ENSMOCG00000001490	Larp1b	95	95.057	Microtus_ochrogaster
ENSMICG00000036111	LARP1B	98	89.432	ENSMODG00000012300	LARP1B	81	88.877	Monodelphis_domestica
ENSMICG00000036111	LARP1B	100	57.553	ENSMALG00000003638	larp1b	85	58.288	Monopterus_albus
ENSMICG00000036111	LARP1B	100	91.045	MGP_CAROLIEiJ_G0024962	Larp1b	100	91.045	Mus_caroli
ENSMICG00000036111	LARP1B	100	91.940	ENSMUSG00000025762	Larp1b	100	91.940	Mus_musculus
ENSMICG00000036111	LARP1B	100	91.642	MGP_PahariEiJ_G0026403	Larp1b	100	91.642	Mus_pahari
ENSMICG00000036111	LARP1B	100	91.940	MGP_SPRETEiJ_G0025897	Larp1b	100	91.940	Mus_spretus
ENSMICG00000036111	LARP1B	100	94.027	ENSMPUG00000017365	LARP1B	81	94.027	Mustela_putorius_furo
ENSMICG00000036111	LARP1B	96	86.763	ENSMLUG00000010229	LARP1B	97	86.763	Myotis_lucifugus
ENSMICG00000036111	LARP1B	76	59.562	ENSNBRG00000023846	larp1b	77	58.235	Neolamprologus_brichardi
ENSMICG00000036111	LARP1B	100	93.731	ENSNLEG00000013819	LARP1B	100	93.731	Nomascus_leucogenys
ENSMICG00000036111	LARP1B	87	86.667	ENSMEUG00000010308	LARP1B	88	86.667	Notamacropus_eugenii
ENSMICG00000036111	LARP1B	98	75.988	ENSOPRG00000005478	LARP1B	100	73.420	Ochotona_princeps
ENSMICG00000036111	LARP1B	100	88.060	ENSODEG00000001292	-	100	88.060	Octodon_degus
ENSMICG00000036111	LARP1B	96	57.843	ENSONIG00000012386	larp1b	93	57.424	Oreochromis_niloticus
ENSMICG00000036111	LARP1B	98	96.049	ENSOCUG00000013330	LARP1B	98	92.257	Oryctolagus_cuniculus
ENSMICG00000036111	LARP1B	98	57.097	ENSORLG00000017954	larp1b	84	56.959	Oryzias_latipes
ENSMICG00000036111	LARP1B	99	56.731	ENSORLG00020013081	larp1b	84	56.959	Oryzias_latipes_hni
ENSMICG00000036111	LARP1B	99	57.403	ENSORLG00015009580	larp1b	84	57.403	Oryzias_latipes_hsok
ENSMICG00000036111	LARP1B	97	56.923	ENSOMEG00000004210	larp1b	82	57.785	Oryzias_melastigma
ENSMICG00000036111	LARP1B	98	94.314	ENSOGAG00000005771	LARP1B	98	93.859	Otolemur_garnettii
ENSMICG00000036111	LARP1B	98	93.030	ENSOARG00000015300	LARP1B	100	91.048	Ovis_aries
ENSMICG00000036111	LARP1B	100	93.134	ENSPPAG00000030439	LARP1B	100	93.134	Pan_paniscus
ENSMICG00000036111	LARP1B	100	94.925	ENSPPRG00000002743	-	100	94.925	Panthera_pardus
ENSMICG00000036111	LARP1B	100	94.925	ENSPTIG00000011225	LARP1B	100	94.925	Panthera_tigris_altaica
ENSMICG00000036111	LARP1B	100	92.836	ENSPTRG00000016437	LARP1B	100	92.836	Pan_troglodytes
ENSMICG00000036111	LARP1B	100	94.328	ENSPANG00000012488	LARP1B	100	94.328	Papio_anubis
ENSMICG00000036111	LARP1B	90	54.862	ENSPKIG00000014360	larp1b	88	55.407	Paramormyrops_kingsleyae
ENSMICG00000036111	LARP1B	98	78.210	ENSPSIG00000012885	LARP1B	93	80.623	Pelodiscus_sinensis
ENSMICG00000036111	LARP1B	79	62.412	ENSPMGG00000007207	larp1b	84	62.412	Periophthalmus_magnuspinnatus
ENSMICG00000036111	LARP1B	94	53.296	ENSPMAG00000002700	larp1b	97	53.789	Petromyzon_marinus
ENSMICG00000036111	LARP1B	98	88.258	ENSPCIG00000026516	LARP1B	98	89.824	Phascolarctos_cinereus
ENSMICG00000036111	LARP1B	98	52.844	ENSPFOG00000022837	-	78	52.661	Poecilia_formosa
ENSMICG00000036111	LARP1B	100	57.246	ENSPFOG00000019519	larp1b	84	57.143	Poecilia_formosa
ENSMICG00000036111	LARP1B	100	58.811	ENSPLAG00000007115	larp1b	84	58.404	Poecilia_latipinna
ENSMICG00000036111	LARP1B	100	58.511	ENSPMEG00000001224	larp1b	84	58.298	Poecilia_mexicana
ENSMICG00000036111	LARP1B	83	54.276	ENSPREG00000005955	-	95	53.947	Poecilia_reticulata
ENSMICG00000036111	LARP1B	98	90.578	ENSPCAG00000007546	LARP1B	100	87.445	Procavia_capensis
ENSMICG00000036111	LARP1B	100	98.507	ENSPCOG00000021874	LARP1B	100	98.507	Propithecus_coquereli
ENSMICG00000036111	LARP1B	100	86.947	ENSPVAG00000005373	LARP1B	100	86.947	Pteropus_vampyrus
ENSMICG00000036111	LARP1B	76	64.723	ENSPNYG00000017357	larp1b	94	62.948	Pundamilia_nyererei
ENSMICG00000036111	LARP1B	95	55.738	ENSPNAG00000008823	larp1b	84	57.481	Pygocentrus_nattereri
ENSMICG00000036111	LARP1B	100	94.030	ENSRNOG00000038366	Larp1b	100	94.030	Rattus_norvegicus
ENSMICG00000036111	LARP1B	100	92.239	ENSRBIG00000039982	-	100	92.239	Rhinopithecus_bieti
ENSMICG00000036111	LARP1B	100	84.776	ENSRBIG00000038568	-	92	84.776	Rhinopithecus_bieti
ENSMICG00000036111	LARP1B	100	94.627	ENSRROG00000030771	LARP1B	100	94.627	Rhinopithecus_roxellana
ENSMICG00000036111	LARP1B	100	75.224	ENSRROG00000038525	-	96	75.224	Rhinopithecus_roxellana
ENSMICG00000036111	LARP1B	98	90.303	ENSSHAG00000014474	LARP1B	99	88.156	Sarcophilus_harrisii
ENSMICG00000036111	LARP1B	96	57.675	ENSSMAG00000006347	larp1b	93	56.342	Scophthalmus_maximus
ENSMICG00000036111	LARP1B	96	58.830	ENSSDUG00000004182	larp1b	82	58.624	Seriola_dumerili
ENSMICG00000036111	LARP1B	78	62.482	ENSSLDG00000014613	larp1b	71	61.474	Seriola_lalandi_dorsalis
ENSMICG00000036111	LARP1B	98	77.388	ENSSPUG00000011837	LARP1B	97	70.358	Sphenodon_punctatus
ENSMICG00000036111	LARP1B	97	58.188	ENSSPAG00000017772	larp1b	82	58.515	Stegastes_partitus
ENSMICG00000036111	LARP1B	100	92.035	ENSSSCG00000034280	LARP1B	99	94.845	Sus_scrofa
ENSMICG00000036111	LARP1B	73	57.202	ENSSSCG00000040491	-	89	61.674	Sus_scrofa
ENSMICG00000036111	LARP1B	91	72.351	ENSTGUG00000002098	-	99	67.303	Taeniopygia_guttata
ENSMICG00000036111	LARP1B	97	55.359	ENSTRUG00000005612	larp1b	82	56.278	Takifugu_rubripes
ENSMICG00000036111	LARP1B	96	55.592	ENSTNIG00000012398	larp1b	94	56.344	Tetraodon_nigroviridis
ENSMICG00000036111	LARP1B	87	92.381	ENSTBEG00000004177	LARP1B	88	86.667	Tupaia_belangeri
ENSMICG00000036111	LARP1B	100	82.732	ENSTTRG00000012984	LARP1B	100	82.732	Tursiops_truncatus
ENSMICG00000036111	LARP1B	100	84.478	ENSUAMG00000016938	-	91	97.633	Ursus_americanus
ENSMICG00000036111	LARP1B	100	94.580	ENSUMAG00000007373	LARP1B	98	94.580	Ursus_maritimus
ENSMICG00000036111	LARP1B	98	81.925	ENSVPAG00000007223	LARP1B	100	79.846	Vicugna_pacos
ENSMICG00000036111	LARP1B	100	94.912	ENSVVUG00000011307	LARP1B	100	94.118	Vulpes_vulpes
ENSMICG00000036111	LARP1B	99	61.774	ENSXETG00000022512	larp1b	88	61.446	Xenopus_tropicalis
ENSMICG00000036111	LARP1B	73	62.312	ENSXCOG00000004435	larp1b	72	60.637	Xiphophorus_couchianus
ENSMICG00000036111	LARP1B	97	59.041	ENSXMAG00000008150	larp1b	81	59.190	Xiphophorus_maculatus