EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMICG00000036729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microcebus_murinus
Status: putative
Strand: Plus strand
Length: 15586 bases
Position: chr2:55742873-55758458
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMICP00000025136	PABP	PF00658.18	8.3e-23	1	1
ENSMICP00000028562	PABP	PF00658.18	9.1e-23	1	1
ENSMICP00000025136	RRM_5	PF13893.6	1.3e-06	1	2
ENSMICP00000025136	RRM_5	PF13893.6	1.3e-06	2	2
ENSMICP00000028562	RRM_5	PF13893.6	1.6e-06	1	2
ENSMICP00000028562	RRM_5	PF13893.6	1.6e-06	2	2
ENSMICP00000025136	RRM_1	PF00076.22	8.9e-65	1	3
ENSMICP00000025136	RRM_1	PF00076.22	8.9e-65	2	3
ENSMICP00000025136	RRM_1	PF00076.22	8.9e-65	3	3
ENSMICP00000028562	RRM_1	PF00076.22	9.2e-65	1	3
ENSMICP00000028562	RRM_1	PF00076.22	9.2e-65	2	3
ENSMICP00000028562	RRM_1	PF00076.22	9.2e-65	3	3
ENSMICP00000048515	RRM_1	PF00076.22	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMICT00000050138	-	1512	-	ENSMICP00000025136	503 (aa)	-	UPI00085B43B6
ENSMICT00000036588	-	1584	-	ENSMICP00000028562	527 (aa)	-	UPI00085B2921
ENSMICT00000061142	-	960	-	ENSMICP00000048515	319 (aa)	-	UPI000C2ED73D

Gene Model

Click here to download ENSMICG00000036729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMICG00000036729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMICG00000036729	-	53	37.500	ENSMICG00000007867	CELF2	57	37.500
ENSMICG00000036729	-	99	67.901	ENSMICG00000009121	PABPC1	99	67.901
ENSMICG00000036729	-	53	32.099	ENSMICG00000009699	ELAVL1	94	30.357
ENSMICG00000036729	-	58	61.130	ENSMICG00000041706	PABPC5	94	61.130
ENSMICG00000036729	-	76	100.000	ENSMICG00000016633	-	96	100.000
ENSMICG00000036729	-	55	30.719	ENSMICG00000007192	SYNCRIP	52	30.719
ENSMICG00000036729	-	60	54.839	ENSMICG00000047642	-	98	56.296
ENSMICG00000036729	-	54	36.782	ENSMICG00000010644	CELF3	67	35.714
ENSMICG00000036729	-	51	32.099	ENSMICG00000003286	ELAVL4	73	32.099
ENSMICG00000036729	-	59	38.636	ENSMICG00000027918	-	67	38.636
ENSMICG00000036729	-	61	69.304	ENSMICG00000029683	PABPC4L	97	70.234
ENSMICG00000036729	-	59	40.964	ENSMICG00000003506	CELF5	61	39.130
ENSMICG00000036729	-	99	64.510	ENSMICG00000011830	PABPC3	99	65.079

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMICG00000036729	-	100	85.740	ENSG00000090621	PABPC4	99	91.304	Homo_sapiens
ENSMICG00000036729	-	99	73.818	ENSAPOG00000001161	pabpc4	99	74.776	Acanthochromis_polyacanthus
ENSMICG00000036729	-	100	76.182	ENSAMEG00000011535	-	99	73.818	Ailuropoda_melanoleuca
ENSMICG00000036729	-	99	52.757	ENSAMEG00000015083	-	88	53.467	Ailuropoda_melanoleuca
ENSMICG00000036729	-	100	73.582	ENSACIG00000023343	pabpc4	99	74.645	Amphilophus_citrinellus
ENSMICG00000036729	-	99	75.614	ENSAOCG00000021529	pabpc4	99	75.651	Amphiprion_ocellaris
ENSMICG00000036729	-	99	74.592	ENSAPEG00000019196	pabpc4	99	75.000	Amphiprion_percula
ENSMICG00000036729	-	99	73.866	ENSATEG00000007402	pabpc4	99	74.286	Anabas_testudineus
ENSMICG00000036729	-	99	78.470	ENSAPLG00000009729	-	96	78.114	Anas_platyrhynchos
ENSMICG00000036729	-	99	78.114	ENSACAG00000002544	PABPC4	100	78.114	Anolis_carolinensis
ENSMICG00000036729	-	100	85.080	ENSANAG00000025079	PABPC4	99	84.369	Aotus_nancymaae
ENSMICG00000036729	-	100	73.929	ENSACLG00000019558	pabpc4	99	75.000	Astatotilapia_calliptera
ENSMICG00000036729	-	100	67.736	ENSAMXG00000018779	pabpc4	98	69.120	Astyanax_mexicanus
ENSMICG00000036729	-	100	81.456	ENSBTAG00000017125	PABPC4	99	78.856	Bos_taurus
ENSMICG00000036729	-	55	70.103	ENSBTAG00000048536	-	92	70.103	Bos_taurus
ENSMICG00000036729	-	76	87.654	ENSCJAG00000045953	-	93	87.654	Callithrix_jacchus
ENSMICG00000036729	-	100	85.080	ENSCJAG00000002512	-	99	80.817	Callithrix_jacchus
ENSMICG00000036729	-	100	85.258	ENSCAFG00000003081	PABPC4	99	84.725	Canis_familiaris
ENSMICG00000036729	-	100	76.182	ENSCAFG00020004161	PABPC4	99	73.818	Canis_lupus_dingo
ENSMICG00000036729	-	100	75.676	ENSCHIG00000019398	-	99	73.311	Capra_hircus
ENSMICG00000036729	-	100	63.884	ENSCHIG00000023385	-	98	64.831	Capra_hircus
ENSMICG00000036729	-	100	85.613	ENSTSYG00000006532	PABPC4	99	81.528	Carlito_syrichta
ENSMICG00000036729	-	100	85.080	ENSCAPG00000015984	PABPC4	99	84.673	Cavia_aperea
ENSMICG00000036729	-	100	85.080	ENSCPOG00000009552	PABPC4	99	82.721	Cavia_porcellus
ENSMICG00000036729	-	100	85.409	ENSCCAG00000037306	PABPC4	99	84.698	Cebus_capucinus
ENSMICG00000036729	-	100	85.435	ENSCATG00000042164	PABPC4	99	84.725	Cercocebus_atys
ENSMICG00000036729	-	100	85.435	ENSCLAG00000011899	PABPC4	99	82.593	Chinchilla_lanigera
ENSMICG00000036729	-	100	76.014	ENSCSAG00000001135	PABPC4	99	73.480	Chlorocebus_sabaeus
ENSMICG00000036729	-	92	91.153	ENSCHOG00000005327	PABPC4	81	91.316	Choloepus_hoffmanni
ENSMICG00000036729	-	99	78.292	ENSCPBG00000001038	PABPC4	99	78.114	Chrysemys_picta_bellii
ENSMICG00000036729	-	100	85.435	ENSCANG00000034177	PABPC4	100	84.725	Colobus_angolensis_palliatus
ENSMICG00000036729	-	98	84.916	ENSCGRG00001018166	Pabpc4	99	84.364	Cricetulus_griseus_chok1gshd
ENSMICG00000036729	-	98	84.916	ENSCGRG00000009777	Pabpc4	100	84.364	Cricetulus_griseus_crigri
ENSMICG00000036729	-	100	73.750	ENSCSEG00000000130	pabpc4	99	75.000	Cynoglossus_semilaevis
ENSMICG00000036729	-	100	74.194	ENSCVAG00000019246	pabpc4	100	75.627	Cyprinodon_variegatus
ENSMICG00000036729	-	99	73.703	ENSDARG00000059259	pabpc4	99	74.692	Danio_rerio
ENSMICG00000036729	-	100	85.435	ENSDNOG00000018444	-	100	84.902	Dasypus_novemcinctus
ENSMICG00000036729	-	100	81.597	ENSDORG00000011581	Pabpc4	99	78.819	Dipodomys_ordii
ENSMICG00000036729	-	73	97.425	ENSETEG00000018453	-	75	72.782	Echinops_telfairi
ENSMICG00000036729	-	96	61.895	ENSETEG00000009172	-	95	61.952	Echinops_telfairi
ENSMICG00000036729	-	97	66.904	ENSEBUG00000013782	pabpc4	99	67.387	Eptatretus_burgeri
ENSMICG00000036729	-	99	70.307	ENSEBUG00000000992	pabpc4	99	70.307	Eptatretus_burgeri
ENSMICG00000036729	-	100	85.435	ENSEASG00005014119	PABPC4	99	73.649	Equus_asinus_asinus
ENSMICG00000036729	-	100	85.435	ENSECAG00000009396	PABPC4	99	73.649	Equus_caballus
ENSMICG00000036729	-	100	73.773	ENSEEUG00000002962	PABPC4	99	72.835	Erinaceus_europaeus
ENSMICG00000036729	-	99	73.036	ENSELUG00000003195	pabpc4	98	73.759	Esox_lucius
ENSMICG00000036729	-	100	85.258	ENSFCAG00000015254	-	99	84.725	Felis_catus
ENSMICG00000036729	-	99	77.402	ENSFALG00000000543	PABPC4	99	77.402	Ficedula_albicollis
ENSMICG00000036729	-	100	73.311	ENSFDAG00000020016	-	99	73.649	Fukomys_damarensis
ENSMICG00000036729	-	98	70.645	ENSFDAG00000010581	-	100	53.541	Fukomys_damarensis
ENSMICG00000036729	-	100	77.376	ENSFHEG00000007548	pabpc4	99	77.989	Fundulus_heteroclitus
ENSMICG00000036729	-	99	72.193	ENSGMOG00000019025	pabpc4	98	73.440	Gadus_morhua
ENSMICG00000036729	-	99	78.470	ENSGALG00000003800	PABPC4	99	78.470	Gallus_gallus
ENSMICG00000036729	-	100	76.538	ENSGAFG00000018195	pabpc4	90	93.162	Gambusia_affinis
ENSMICG00000036729	-	100	73.214	ENSGACG00000007179	pabpc4	99	73.929	Gasterosteus_aculeatus
ENSMICG00000036729	-	99	78.648	ENSGAGG00000001888	PABPC4	99	78.292	Gopherus_agassizii
ENSMICG00000036729	-	100	85.258	ENSGGOG00000004002	PABPC4	99	84.547	Gorilla_gorilla
ENSMICG00000036729	-	100	74.107	ENSHBUG00000020206	pabpc4	99	75.179	Haplochromis_burtoni
ENSMICG00000036729	-	100	85.613	ENSHGLG00000011162	PABPC4	99	81.350	Heterocephalus_glaber_female
ENSMICG00000036729	-	100	85.613	ENSHGLG00100001580	PABPC4	99	81.350	Heterocephalus_glaber_male
ENSMICG00000036729	-	100	74.061	ENSHCOG00000012694	pabpc4	99	74.597	Hippocampus_comes
ENSMICG00000036729	-	98	71.379	ENSIPUG00000016620	pabpc4	99	72.792	Ictalurus_punctatus
ENSMICG00000036729	-	100	85.923	ENSSTOG00000010416	PABPC4	99	86.106	Ictidomys_tridecemlineatus
ENSMICG00000036729	-	100	79.826	ENSJJAG00000007781	Pabpc4	99	79.826	Jaculus_jaculus
ENSMICG00000036729	-	99	75.706	ENSKMAG00000013597	pabpc4	98	77.358	Kryptolebias_marmoratus
ENSMICG00000036729	-	100	73.619	ENSLBEG00000013654	pabpc4	99	74.866	Labrus_bergylta
ENSMICG00000036729	-	99	75.442	ENSLACG00000011907	PABPC4	99	75.442	Latimeria_chalumnae
ENSMICG00000036729	-	100	74.028	ENSLOCG00000001877	pabpc4	99	74.382	Lepisosteus_oculatus
ENSMICG00000036729	-	100	85.923	ENSLAFG00000000151	PABPC4	99	85.923	Loxodonta_africana
ENSMICG00000036729	-	100	85.435	ENSMFAG00000041481	PABPC4	99	84.725	Macaca_fascicularis
ENSMICG00000036729	-	100	76.014	ENSMMUG00000007497	PABPC4	99	73.480	Macaca_mulatta
ENSMICG00000036729	-	100	85.435	ENSMNEG00000043054	PABPC4	99	84.725	Macaca_nemestrina
ENSMICG00000036729	-	100	85.435	ENSMLEG00000040716	PABPC4	99	84.725	Mandrillus_leucophaeus
ENSMICG00000036729	-	99	74.229	ENSMAMG00000010025	pabpc4	98	74.640	Mastacembelus_armatus
ENSMICG00000036729	-	100	75.281	ENSMZEG00005006141	pabpc4	99	76.030	Maylandia_zebra
ENSMICG00000036729	-	99	85.922	ENSMGAG00000005408	PABPC4	99	71.864	Meleagris_gallopavo
ENSMICG00000036729	-	70	96.465	ENSMAUG00000019763	-	64	96.465	Mesocricetus_auratus
ENSMICG00000036729	-	73	89.423	ENSMAUG00000001295	-	97	89.423	Mesocricetus_auratus
ENSMICG00000036729	-	58	61.290	ENSMAUG00000004089	-	89	61.290	Mesocricetus_auratus
ENSMICG00000036729	-	99	84.353	ENSMOCG00000006763	Pabpc4	99	81.013	Microtus_ochrogaster
ENSMICG00000036729	-	100	74.632	ENSMMOG00000002363	pabpc4	99	75.551	Mola_mola
ENSMICG00000036729	-	98	70.805	ENSMODG00000017657	-	99	71.429	Monodelphis_domestica
ENSMICG00000036729	-	60	64.653	ENSMODG00000018051	-	89	66.559	Monodelphis_domestica
ENSMICG00000036729	-	99	73.599	ENSMALG00000011017	pabpc4	99	74.555	Monopterus_albus
ENSMICG00000036729	-	100	71.581	MGP_CAROLIEiJ_G0024864	-	100	72.291	Mus_caroli
ENSMICG00000036729	-	100	72.297	MGP_CAROLIEiJ_G0026435	-	100	74.227	Mus_caroli
ENSMICG00000036729	-	100	84.278	ENSMUSG00000011257	Pabpc4	99	84.461	Mus_musculus
ENSMICG00000036729	-	100	71.791	MGP_PahariEiJ_G0028765	Pabpc4	100	74.227	Mus_pahari
ENSMICG00000036729	-	73	97.425	MGP_SPRETEiJ_G0027415	Pabpc4	100	74.227	Mus_spretus
ENSMICG00000036729	-	100	76.182	ENSMPUG00000014414	-	99	73.649	Mustela_putorius_furo
ENSMICG00000036729	-	94	48.799	ENSMPUG00000006836	-	91	48.799	Mustela_putorius_furo
ENSMICG00000036729	-	100	85.558	ENSMLUG00000012068	PABPC4	99	85.558	Myotis_lucifugus
ENSMICG00000036729	-	100	85.558	ENSNGAG00000018292	Pabpc4	99	85.558	Nannospalax_galili
ENSMICG00000036729	-	64	86.441	ENSNBRG00000010047	-	75	86.441	Neolamprologus_brichardi
ENSMICG00000036729	-	60	75.342	ENSNBRG00000009708	pabpc4	97	75.342	Neolamprologus_brichardi
ENSMICG00000036729	-	100	85.435	ENSNLEG00000011928	PABPC4	99	84.725	Nomascus_leucogenys
ENSMICG00000036729	-	91	92.574	ENSOPRG00000011984	PABPC4	86	92.574	Ochotona_princeps
ENSMICG00000036729	-	97	79.455	ENSODEG00000017434	-	87	95.708	Octodon_degus
ENSMICG00000036729	-	56	61.224	ENSODEG00000013457	-	99	61.224	Octodon_degus
ENSMICG00000036729	-	100	84.902	ENSODEG00000006592	-	99	81.736	Octodon_degus
ENSMICG00000036729	-	100	74.107	ENSONIG00000008176	pabpc4	99	75.179	Oreochromis_niloticus
ENSMICG00000036729	-	99	77.758	ENSOANG00000010001	PABPC4	99	77.758	Ornithorhynchus_anatinus
ENSMICG00000036729	-	73	99.142	ENSOCUG00000000562	PABPC4	67	99.142	Oryctolagus_cuniculus
ENSMICG00000036729	-	99	81.423	ENSORLG00000017479	pabpc4	98	81.423	Oryzias_latipes
ENSMICG00000036729	-	99	81.423	ENSORLG00020018644	pabpc4	98	81.423	Oryzias_latipes_hni
ENSMICG00000036729	-	99	81.423	ENSORLG00015015042	pabpc4	98	81.423	Oryzias_latipes_hsok
ENSMICG00000036729	-	99	74.047	ENSOMEG00000014410	pabpc4	98	75.180	Oryzias_melastigma
ENSMICG00000036729	-	100	81.693	ENSOGAG00000004067	PABPC4	99	81.693	Otolemur_garnettii
ENSMICG00000036729	-	100	75.676	ENSOARG00000020060	PABPC4	99	73.311	Ovis_aries
ENSMICG00000036729	-	100	85.258	ENSPPAG00000043625	PABPC4	99	84.547	Pan_paniscus
ENSMICG00000036729	-	100	85.258	ENSPPRG00000024727	PABPC4	99	84.725	Panthera_pardus
ENSMICG00000036729	-	100	85.258	ENSPTIG00000005829	PABPC4	99	84.725	Panthera_tigris_altaica
ENSMICG00000036729	-	100	85.258	ENSPTRG00000000573	PABPC4	99	84.547	Pan_troglodytes
ENSMICG00000036729	-	100	85.258	ENSPANG00000009484	PABPC4	99	84.547	Papio_anubis
ENSMICG00000036729	-	99	75.000	ENSPKIG00000025356	pabpc4	98	75.000	Paramormyrops_kingsleyae
ENSMICG00000036729	-	99	78.470	ENSPSIG00000016892	PABPC4	99	78.114	Pelodiscus_sinensis
ENSMICG00000036729	-	100	76.836	ENSPMGG00000009073	pabpc4	98	76.836	Periophthalmus_magnuspinnatus
ENSMICG00000036729	-	100	76.367	ENSPEMG00000024193	-	99	76.720	Peromyscus_maniculatus_bairdii
ENSMICG00000036729	-	100	83.837	ENSPEMG00000023569	-	99	81.350	Peromyscus_maniculatus_bairdii
ENSMICG00000036729	-	86	62.500	ENSPMAG00000002836	pabpc4	99	64.000	Petromyzon_marinus
ENSMICG00000036729	-	93	68.333	ENSPMAG00000007885	pabpc4	100	68.283	Petromyzon_marinus
ENSMICG00000036729	-	97	79.920	ENSPCIG00000020674	PABPC4	99	79.612	Phascolarctos_cinereus
ENSMICG00000036729	-	100	73.882	ENSPFOG00000002682	pabpc4	99	75.313	Poecilia_formosa
ENSMICG00000036729	-	100	74.240	ENSPLAG00000010112	pabpc4	99	75.492	Poecilia_latipinna
ENSMICG00000036729	-	99	74.317	ENSPMEG00000019739	pabpc4	99	75.492	Poecilia_mexicana
ENSMICG00000036729	-	100	74.240	ENSPREG00000001589	pabpc4	99	75.492	Poecilia_reticulata
ENSMICG00000036729	-	100	75.845	ENSPPYG00000001506	PABPC4	99	73.311	Pongo_abelii
ENSMICG00000036729	-	100	70.608	ENSPCAG00000003341	PABPC4	99	68.074	Procavia_capensis
ENSMICG00000036729	-	100	85.461	ENSPCOG00000023725	-	99	84.752	Propithecus_coquereli
ENSMICG00000036729	-	99	74.067	ENSPCOG00000025882	-	84	92.735	Propithecus_coquereli
ENSMICG00000036729	-	100	73.311	ENSPVAG00000002187	PABPC4	100	73.623	Pteropus_vampyrus
ENSMICG00000036729	-	100	73.929	ENSPNYG00000006134	pabpc4	99	75.000	Pundamilia_nyererei
ENSMICG00000036729	-	100	73.890	ENSPNAG00000024355	pabpc4	99	75.133	Pygocentrus_nattereri
ENSMICG00000036729	-	97	80.944	ENSRNOG00000028592	AABR07035074.1	99	78.584	Rattus_norvegicus
ENSMICG00000036729	-	100	80.382	ENSRNOG00000015642	Pabpc4	99	78.125	Rattus_norvegicus
ENSMICG00000036729	-	100	85.435	ENSRBIG00000039761	PABPC4	99	84.725	Rhinopithecus_bieti
ENSMICG00000036729	-	100	85.435	ENSRROG00000033355	PABPC4	99	84.725	Rhinopithecus_roxellana
ENSMICG00000036729	-	100	85.231	ENSSBOG00000026193	PABPC4	99	84.520	Saimiri_boliviensis_boliviensis
ENSMICG00000036729	-	97	78.909	ENSSHAG00000018139	PABPC4	99	75.623	Sarcophilus_harrisii
ENSMICG00000036729	-	99	74.645	ENSSFOG00015023514	pabpc4	99	74.645	Scleropages_formosus
ENSMICG00000036729	-	99	73.551	ENSSMAG00000009007	pabpc4	98	74.275	Scophthalmus_maximus
ENSMICG00000036729	-	99	73.321	ENSSDUG00000012683	pabpc4	99	74.286	Seriola_dumerili
ENSMICG00000036729	-	99	73.321	ENSSLDG00000013025	pabpc4	99	74.286	Seriola_lalandi_dorsalis
ENSMICG00000036729	-	100	75.169	ENSSARG00000000310	PABPC4	94	72.788	Sorex_araneus
ENSMICG00000036729	-	99	78.058	ENSSPUG00000003204	PABPC4	99	78.237	Sphenodon_punctatus
ENSMICG00000036729	-	99	78.320	ENSSPAG00000009252	pabpc4	99	76.895	Stegastes_partitus
ENSMICG00000036729	-	96	48.059	ENSSSCG00000036170	-	95	48.059	Sus_scrofa
ENSMICG00000036729	-	100	85.080	ENSSSCG00000003660	-	86	99.142	Sus_scrofa
ENSMICG00000036729	-	99	69.426	ENSTGUG00000001266	PABPC4	99	68.919	Taeniopygia_guttata
ENSMICG00000036729	-	100	72.842	ENSTRUG00000005907	pabpc4	98	74.101	Takifugu_rubripes
ENSMICG00000036729	-	100	70.310	ENSTNIG00000016902	pabpc4	98	70.310	Tetraodon_nigroviridis
ENSMICG00000036729	-	73	96.137	ENSTBEG00000009035	PABPC4	100	65.385	Tupaia_belangeri
ENSMICG00000036729	-	73	99.142	ENSTTRG00000014340	PABPC4	100	61.937	Tursiops_truncatus
ENSMICG00000036729	-	100	85.258	ENSUAMG00000000303	PABPC4	99	81.528	Ursus_americanus
ENSMICG00000036729	-	100	85.080	ENSUMAG00000019585	PABPC4	100	84.547	Ursus_maritimus
ENSMICG00000036729	-	100	85.258	ENSVVUG00000005215	PABPC4	99	84.725	Vulpes_vulpes
ENSMICG00000036729	-	97	76.779	ENSXETG00000010946	pabpc4	99	76.548	Xenopus_tropicalis
ENSMICG00000036729	-	60	72.165	ENSXETG00000027221	-	98	72.165	Xenopus_tropicalis
ENSMICG00000036729	-	100	76.154	ENSXCOG00000013190	pabpc4	96	94.118	Xiphophorus_couchianus
ENSMICG00000036729	-	100	74.061	ENSXMAG00000019007	pabpc4	99	75.313	Xiphophorus_maculatus